Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00899 ATGAGTTCTTCTAATGGTGGTGTGCCGCCGGGGTTTCGATTTCATCCGACCGATGAAGAGTTACTTCATTACTATTTGAAGAAAAAGGTTTCCTTTCAAAAATTTGATATGGATGTTATTAGAGAGGTGGATTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAAATGTAAGATTGGATCAACACCACAAAACGAGTGGTACTTTTTCAGTCACAAGGATAGAAAGTACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCTGGATTTTGGAAAGCAACAGGGAGAGACAAATGCATTAGGAATACTTACAAGAAAATTGGAATGAGAAAGACTCTTGTGTTTTACAAAGGTAGAGCTCCTCATGGACAAAAGACTGATTGGATTATGCATGAATATCGCCTTGAAGATGGCAATGATCCTACTAATGAAGATGGTTGGGTAGTATGCAGGGTATTCAAGAAGAAGAACTTGTTCAAGATAGGAAGTGAAGGTGGATCCACACACAATCAAGATCAACAAATGAACAATATTTCCTCAACCAATCCTCGTTCATTCATGCAAAGAGAAAACCAATACCTActacatcaacaacaacatcaaaacCACCCTAGGAACCTATCGGGTTTCGAGCTCGAAAAACCCGAGCTCGGTCTCCATTATCAACACTTGCAAAACTCCCAATACTCACTCTTCCACTCTCAAACTCAACCTCAACCTCTACAAGTTAACTTTGATTATTCATATGCATCATCTTTACAATCAGAACAACCTATTACAGttaaacaacttatgacaaatCCTAGAGATTGTGAGAGTGGTAGTGATGGTTTGAGATATCAAGTTTCAGAATCTGGCATTGAAGTTGGGTCATGTGAACCACCTCAAGAAATGGGTGTTGGAAGGAGTGAAGGAATGAATGAATGGGGTATGCTTGATAGGCTAGTCAATGAAGACTCAACAAAAGAGGCCACTAGGTTTGAGGATGCTAATCCTCATCAAATCAATCAATTATCATTGAGGGGAGAGATGGATTTTTGGGGTTATGGAAAACAATGA 1062 0.3814 MSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDQQMNNISSTNPRSFMQRENQYLLHQQQHQNHPRNLSGFELEKPELGLHYQHLQNSQYSLFHSQTQPQPLQVNFDYSYASSLQSEQPITVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSEGMNEWGMLDRLVNEDSTKEATRFEDANPHQINQLSLRGEMDFWGYGKQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00899 353 PANTHER PROTEIN BEARSKIN2-LIKE 5 257 IPR033519 -
Tsu06g00899 353 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Tsu06g00899 353 SUPERFAMILY NAC domain 7 156 IPR036093 GO:0003677|GO:0006355
Tsu06g00899 353 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Tsu06g00899 353 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Tsu06g00899 353 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00899 Tsu-Chr6 8069751 8072730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00899 1 349 NAC Transcription Factor Family AT1G33280 55.153 1.92e-126 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu06g00899 NAM 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00899 - - gmx:100804181 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00899 06 8069751 8072730 Tsu06g00899 06 8069751 8072730 ECH