Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00882 ATGGCTAAGATTTCCAATCCCTTTCGAATTTTCAACTTCACCACATTTCTATTACTCACATCATACTATATTTTCCCGCCATGTGTGTCTCTTACAATCGAAACACAAGCACTTCTTGATTTCAAAAACCATTTAAAAGACTCATTGAATACTTTAGCTTCATGGAACGAGTCGAACTCTCCATGCAACTTTCACGGAATTACTTGTGATCCACTATCTTTGAAAGTCGTAGAAATCTCATTGGATGATAACTCGCTCTCTGGCGAGATTTTTTCATCAATCTCAATTCTTCATAGCTTGCAAGTTCTTTCATTACCATCAAATTCCATTTCCGGAAAACTTCCGTTAGAAGTAACCAAATTTATAAACCTCAAAGTCTTGAATCTATCAGGAAATGAGCTTGTAGGTGCAATTCCGGATATGTCTGGATTGCGAAACCTTCAAGTTCTTGATCTTTCAGCGAATTACTTTTCTGGTCGAATCCCGAGTTGGATAGGGAATCTCACCAAACTAGTTTCACTTGGTCTCGGAGAAAatctttacactgacagtgtaatACCTGAGAGTCTTGGAAATTTGAAGAACTTAACTTGGCTTTATCTACGCGGTTCTCATTTGACAGGAGAGATTCCGGAAACAATATATGAAATGGAAGCATTGGAGACTTTAGATATTTCAAGAAACAAGTTATCTGGAAAAATCTCGAGATCGATTTCAAAGCtgaaaaatattttcaagaTTGAGTTGTTTTCGAATAATTTGGTAGGCGAAATACCAGAAGAACTTGCGAATCTAACAAATTTGCAAGAAATTGATCTTTCTGCAAACAAAATGTTTGGTAAATTGCCTAAGCAAATTGGTGATATGAAGAATTTGGTTGTTTTTCAACTTTATGATAACAACTTTTCTGGTGAAATTCCTGATGGATTTGGTGATATGGCAAATCTCAAAGGTTTTTCAGTTTACAGAAACATGTTCAACGGAACGATACCAGAGAATTTCGGCCGATTTTCTCCACTCGAAAGTATTGACATATCAGAGAATCAGTTTTCAGGTTTTTTTCCAAAGTACTTGTGTGAAAAAAGAGAGTTGAAATTTTTGCTTGCATTGCAAAACAATTTCTCTGGAAATTTTTCTGAATCTTATGGTTTATGCAAATCACTTGAAAGATTAAGGATTAGTAGGAATTTTTTATCTGGAAAAATTCCAAAAGGTGTTTGGTCACTTCCTAATgcaaaaataattgatttaggTTTTAACAATTTCAGTGGTGAAGTATCTTCAGAAATTGGAAATTCAACAAGTTTAAGTGAAATTGTTTTGATGAACAACATGTTTTCAGGTAAAGTTCcttcacaaattaaaaaattggtgAATTTGGAGAAACTTTACTTGAGTAACAATAATTTCACTGGTACAATTCCACatgaaattggatttttaaaGCAATTATCCACTTTGCATTTGGAAGAAAATTCATTTACAGGTTTAATACCTAATGAATTAGGCCATTGTTCGAGGTTGGTGGATTTGAATCTTGCTAGGAATAATTTATCAGGAAATATTCCAAATTCGTTTTCGCTTATGAGTTCTTTGAATTCTCTGAATTTGTCAAGAAACCAACTTACAGGTTTAATTCCagaaaatttagagaaaatGAAACTAAGTTCAGTGGATTTTTCTGAAAATTTTCTTTCTGGTGGAATTCCATTTTGGATTTTCATCATTGGTGGAGAAAAGGCTTTTGTTGGAAACAAAGATTTGTGTGTTGAGAAAAATCCGAAAGCTTCGATGAATTCGGATTTGAAGATTTGTGATAAGGATAATGGTCATAAAAGAACTatctttgcttataaatatCTCTTGCTCTTTTTCATTGCTGTTATATTCGGCGCCGTTATTTTGATTGGTAGATTCCTTAAGAATCGAAGAGGAAAAAAGTTACAAACCGGTCAAAAGGAAGGACGTGACAAATGGAAACTAGCATCTTTCCACCAAGTGGATATTGATGCTGATGAAATAAGTCATTTGAAAGAAGATAATTTAATCGGCTACGGTGGTACCGGAAAGGTTTATCGAGTCGAGTTGAAGAAAAATGGTGCAGTGGTGGCCGTGAAGCAACTAGAGAAAGCGAATGATGTGAGGATTTTAGCAGCAGAAATAGAGATTTTAGGGAAAATTAGacataaaaatatacttaaacTTTATGCTTGTTTTCTTAAAGGAGAAACCAGTCTTTTAGTTTATGAGTATATGTCAAATGGTAATCTTTTTCAAGCTCTTCATAGAGAGATGAAAGACGAGAAGGTAACATATGATTGGAATCAAAGGTATAAAATCGCGTTGGGAGGAGCTAAAGGGATTTGTTACTTGCACCATGATTGTTCTCCACCTGTTATTCATAGAGATATAAAATCTAGCAACATTTTGCTTGATGAAGATTATGAAGCAAAAATTGCTGATTTTGGTGTTGCAAGGTTTGCAGAAAAATCTCAGATGGATTATAGCTCTTTTGCCGGCACACATGGTTATATTGCTCCAGAACTGGCTTATACAACTGAAATAACCGAAAAGTGTGATGTGTACAGCTTCGGAATTGTACTATTAGAGTTAGTATCTGGTCGTGAAGCTGTTGAAGAGGCATACGGTGAAGCAAAAGATATTGTTTATTGGGTTATGACCAATCTTCATGAACGTGAAAGTGTACTCAACATTCTTGACGATAGAGTTGCATCAACACATTGTGTTGATGATATGATAAAAGTGTTGAAGATCGCTATTAAGTGCACTACTAAGCTTCCAACTTTGCGTCCTACAATGCGAGATGTTGTTAAGATGCTTATTGATTCCGAGCCTTGCAAGATGAAATCTCAAGGATGTGGTCCTGAGAAAGATGCAAGATCTTTTGTGTAG 2913 0.3371 MAKISNPFRIFNFTTFLLLTSYYIFPPCVSLTIETQALLDFKNHLKDSLNTLASWNESNSPCNFHGITCDPLSLKVVEISLDDNSLSGEIFSSISILHSLQVLSLPSNSISGKLPLEVTKFINLKVLNLSGNELVGAIPDMSGLRNLQVLDLSANYFSGRIPSWIGNLTKLVSLGLGENLYTDSVIPESLGNLKNLTWLYLRGSHLTGEIPETIYEMEALETLDISRNKLSGKISRSISKLKNIFKIELFSNNLVGEIPEELANLTNLQEIDLSANKMFGKLPKQIGDMKNLVVFQLYDNNFSGEIPDGFGDMANLKGFSVYRNMFNGTIPENFGRFSPLESIDISENQFSGFFPKYLCEKRELKFLLALQNNFSGNFSESYGLCKSLERLRISRNFLSGKIPKGVWSLPNAKIIDLGFNNFSGEVSSEIGNSTSLSEIVLMNNMFSGKVPSQIKKLVNLEKLYLSNNNFTGTIPHEIGFLKQLSTLHLEENSFTGLIPNELGHCSRLVDLNLARNNLSGNIPNSFSLMSSLNSLNLSRNQLTGLIPENLEKMKLSSVDFSENFLSGGIPFWIFIIGGEKAFVGNKDLCVEKNPKASMNSDLKICDKDNGHKRTIFAYKYLLLFFIAVIFGAVILIGRFLKNRRGKKLQTGQKEGRDKWKLASFHQVDIDADEISHLKEDNLIGYGGTGKVYRVELKKNGAVVAVKQLEKANDVRILAAEIEILGKIRHKNILKLYACFLKGETSLLVYEYMSNGNLFQALHREMKDEKVTYDWNQRYKIALGGAKGICYLHHDCSPPVIHRDIKSSNILLDEDYEAKIADFGVARFAEKSQMDYSSFAGTHGYIAPELAYTTEITEKCDVYSFGIVLLELVSGREAVEEAYGEAKDIVYWVMTNLHERESVLNILDDRVASTHCVDDMIKVLKIAIKCTTKLPTLRPTMRDVVKMLIDSEPCKMKSQGCGPEKDARSFV 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00882 970 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 12 960 - -
Tsu06g00882 970 Gene3D Phosphorylase Kinase; domain 1 650 751 - -
Tsu06g00882 970 Gene3D Ribonuclease Inhibitor 241 314 IPR032675 -
Tsu06g00882 970 Gene3D Ribonuclease Inhibitor 184 240 IPR032675 -
Tsu06g00882 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Tsu06g00882 970 ProSiteProfiles Protein kinase domain profile. 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00882 970 SUPERFAMILY Protein kinase-like (PK-like) 674 947 IPR011009 -
Tsu06g00882 970 Pfam Leucine rich repeat 145 206 IPR001611 GO:0005515
Tsu06g00882 970 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Tsu06g00882 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 960 - -
Tsu06g00882 970 SMART LRR_typ_2 529 552 IPR003591 -
Tsu06g00882 970 SMART LRR_typ_2 193 217 IPR003591 -
Tsu06g00882 970 SMART LRR_typ_2 481 504 IPR003591 -
Tsu06g00882 970 SMART LRR_typ_2 457 479 IPR003591 -
Tsu06g00882 970 SMART LRR_typ_2 265 289 IPR003591 -
Tsu06g00882 970 SMART LRR_typ_2 144 168 IPR003591 -
Tsu06g00882 970 SMART serkin_6 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00882 970 Gene3D Ribonuclease Inhibitor 315 600 IPR032675 -
Tsu06g00882 970 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Tsu06g00882 970 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Tsu06g00882 970 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Tsu06g00882 970 SUPERFAMILY RNI-like 247 567 - -
Tsu06g00882 970 SUPERFAMILY L domain-like 58 367 - -
Tsu06g00882 970 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Tsu06g00882 970 Pfam Protein kinase domain 679 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00882 970 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Tsu06g00882 970 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Tsu06g00882 970 Gene3D Transferase(Phosphotransferase) domain 1 752 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00882 Tsu-Chr6 7898610 7902774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00882 14 958 Receptor kinase-like Gene Family AT1G72180 54.175 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu06g00882 Pkinase 9.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00882 - - cam:101508379 1404.04