Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g00881 | ATGGGTTGTTGGAGATTCTCACTCTCTTCAAATTCCACTACTAATATTCCCTTTAAACGAATCTACCATGGTCCCTTTATCAAAGACATTTACGGGGGAAATTCCCATGTATGCGGTCTGATTAAAGAGACCAACGGTTTTCGCCCTGAGTGTTGGCAATGGAAAGGTTTCAATTCAACAAACCCAAAGATGAAGATGAACATGTCAAGTATCGCGGTGGGGGAGAATTTTGCATGTGGGCTATCAGAAAATGAAAAAGGGAATAATGTTACTTGTATAGGAAGTAACAAAAAAGTAGTTGATGAACCAAAGAATGGTAGAGATTATTCTTTAATTGAAGCTGGTTCAAATCATGTTTGTGCTATCACAAATGATGGTAGTTTGGATTGTTGGGGTGATATGGTTGGTGAGAAACCAATAGGAAGATTCATTTCATTGGCTTTAGGAGAGAATAGAAGTTGTGCACTTGGGTATGATGGATTAATCACTTGTTGGGGTTTGAATAATTTCACCTTGCCAATAAGTTTAAAAGGGACTTATTTTGAGTCAATTGTGgctaaaaatagtgttttttgtGGTGTTTTGACTTCTAATTACTCTTTATTTTGTTGGGGTGATGAAATTTTTGAGTCAAAAGAAGATGCATTCAAGGTGTTTGATAATGTGCTTCCTGGACCTTGTAAGAATCAATGTCCATGTGGACCTTTACCAGATTCTGCTAAACTTTGTGTCTCACCAAGCATCATTTGTAAAGCTTGTTTACCATCGTTTGAAATTCCATCATCACCACCGTTGAATCCTCCGTTAGGAAGTCCCGGAAATTCATCGAAAAGTGGTACTTGGAGCAACAAAATGGTGGCGTTTCTAGTAATCGGATGTGTTGGTTGTAGTATTTTGTTACTAGCCTTAtctttcttcttttacaaatacTGCAGAGGCACAATATGCAGATCTAAATCAAGAGTTCATGACTCTGGAAGATTAGACGATCTTGATCAAGAAACCGAATTGGAGCCTCGAGCTAACCGTGCAGTTCTCGAGAAGAGGTTAAGCCATGTAATCAGCAAGGGAAATGGAGGTAGCCTTTTGGAGGAATTTTCACTTCAAACACTAATTGAAGCCACTGGAAATTTCTCCGAAGAGAACAAAATCGGTGTTGGAAGCTTCGGTTCCGTGTACCATGCTAAACTTGAAGACGGAAAAGAAGTTGCTATCAAAAGAGCCGAAATGTCAACAAATTCACCTTCATTTGGAAATGTTAGTGTCACCAAAAGACAAGAAGACAATGACAGTGCTTTTGTTAATGAACTTGAATCTTTATCAAGACTCCACCACAAAAACTTGGTAAAATTACTCGGTTTCTACGAAGACAAAAACGAGAGAATCCTAGTATACGAATACATGAACAACGGAAGCTTAAACGATCATCTTCATAAGTTTCAAACTTCAACTATTATGTCATGGAGCGGTCGTATAAAAGTTGCATTAGACGCAGCTAGAGGCATAGAATATTTACATAAATACGCCATGCCACCAATTATTCACCGTGACATTAAAACATCAAACATTTTATTAGATTCAAAATGTGTCGCTAAAGTAGCCGATTTCGGCTTATCCCTAATGGGTCCAGAAGACGAAGAGTCACATATTTCGCTTCTAGCAGCCGGAACCGTTGGTTACATGGATCCAGAATACTATAGGCTACAACACTTGACTACAAAAAGTGACGTGTATAGTTTCGGCGTTGTTTTGTTAGAACTTTTAAGTGGGTATAAAGCTatacataaaaatgaaaatggagTGCCAAGAAATGTGGTTGATTTTGTTGTACCATTTATTGTTCAAGATGAGATTCATAGAATTTTGGATCCAAAATTGCCACCACCAACACCATTTGAGATTGAAGGTGTGGCTTTTGTAGGTTATTTAGCTTGTCATTGTGTTCGTTTAGAAGGTAGAGATAGACCAAGTATGAGTCATGTTGTGAATAGTTTAGAGAAAGCACTAGAGGCTTGTTTGGCACAACCAATAATTTGTGGGTCCAATAGGACCACTACTAGCACTATTTCTAATGAGTGA | 2079 | 0.3728 | MGCWRFSLSSNSTTNIPFKRIYHGPFIKDIYGGNSHVCGLIKETNGFRPECWQWKGFNSTNPKMKMNMSSIAVGENFACGLSENEKGNNVTCIGSNKKVVDEPKNGRDYSLIEAGSNHVCAITNDGSLDCWGDMVGEKPIGRFISLALGENRSCALGYDGLITCWGLNNFTLPISLKGTYFESIVAKNSVFCGVLTSNYSLFCWGDEIFESKEDAFKVFDNVLPGPCKNQCPCGPLPDSAKLCVSPSIICKACLPSFEIPSSPPLNPPLGSPGNSSKSGTWSNKMVAFLVIGCVGCSILLLALSFFFYKYCRGTICRSKSRVHDSGRLDDLDQETELEPRANRAVLEKRLSHVISKGNGGSLLEEFSLQTLIEATGNFSEENKIGVGSFGSVYHAKLEDGKEVAIKRAEMSTNSPSFGNVSVTKRQEDNDSAFVNELESLSRLHHKNLVKLLGFYEDKNERILVYEYMNNGSLNDHLHKFQTSTIMSWSGRIKVALDAARGIEYLHKYAMPPIIHRDIKTSNILLDSKCVAKVADFGLSLMGPEDEESHISLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPFIVQDEIHRILDPKLPPPTPFEIEGVAFVGYLACHCVRLEGRDRPSMSHVVNSLEKALEACLAQPIICGSNRTTTSTISNE | 692 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g00881 | 692 | SUPERFAMILY | RCC1/BLIP-II | 18 | 208 | IPR009091 | - | |
Tsu06g00881 | 692 | SMART | serkin_6 | 378 | 669 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g00881 | 692 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 13 | 678 | IPR044815 | GO:0004674 | |
Tsu06g00881 | 692 | SUPERFAMILY | Protein kinase-like (PK-like) | 361 | 665 | IPR011009 | - | |
Tsu06g00881 | 692 | Gene3D | Transferase(Phosphotransferase) domain 1 | 468 | 676 | - | - | |
Tsu06g00881 | 692 | PANTHER | OJ000114_01.11 PROTEIN | 13 | 678 | - | - | |
Tsu06g00881 | 692 | Gene3D | Phosphorylase Kinase; domain 1 | 342 | 467 | - | - | |
Tsu06g00881 | 692 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 112 | 133 | - | - | |
Tsu06g00881 | 692 | ProSiteProfiles | Protein kinase domain profile. | 378 | 669 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g00881 | 692 | Gene3D | - | 135 | 217 | IPR009091 | - | |
Tsu06g00881 | 692 | Gene3D | - | 5 | 134 | IPR009091 | - | |
Tsu06g00881 | 692 | Pfam | Protein kinase domain | 379 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g00881 | 692 | CDD | STKc_IRAK | 384 | 667 | - | - | |
Tsu06g00881 | 692 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 513 | 525 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu06g00881 | 692 | ProSitePatterns | Protein kinases ATP-binding region signature. | 384 | 406 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g00881 | Tsu-Chr6 | 7892917 | 7895367 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g00881 | 3 | 686 | Receptor kinase-like Gene Family | AT5G47850 | 50.865 | 0.0 | 632 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Tsu06g00881 | Pkinase | 9.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g00881 | - | - | pvu:PHAVU_011G003100g | 891.338 |