Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00854 ATGGATCTCAAGAGCATTAATAGCAATGAAGAAAATCATGTCTATCATGCTCAAATGCAtttatacaaacatatatacagCTTTTTAAGTTCCATGGCACTCAAATCTGCAGTGGAGCTAGGTGTAATAGATGTAATCCACAAACATGGGAAACCAATGACTCTTTCTGAATTAGTTTCATCTTTGAAACTTCACCCTTCTAAAGTTAGTGTCTTCTATCGCTTCTTGCGCTTGTTAACACACAATGGTTTCTTCGCGAAAACAACAGTGTTGAAAGCCAAAGAAGACGAAGAAGTAGAagaagaaacaacttatgcacTCACACCTCCTTCAATGCTTCTCATCAATGGCGAGTCACCTTGTTTTACAACACTTTTCAATGTAATTCTTCATCCATCAGCTATGGATATGTGGCACTCTTCTAAGAAATGGTTTGGAGAAGAGAAGGAACTAGGACTCTATGAAAGTGCAACAGGTGAAACATTTTTTGACTTTCTTAACAAAGATTCTGAAACATATATACTTAGTATGTTTCAAGGATTCATGGCTGCTGATTCTCAAATGATGAAGTTTGCACTCAAAGATTGTAACCATGTTTTTGAGGGTTTGGAGTCTTTGGTTGATGTTGCTGGTGGAACTGGAGTTGTGTCAAAACTCATTCTTGAAGCATTTCCGAATATTAAATGCACTGTTTTAGATCAACCACAGGTTGTGGCTAATTTATCTGGAACtcaaaatttgaactttgtttGTGGTGATATGTTCAAATTTATTCCTCCTGCAGATGCTGTTTTACTTAAGTGGGTTCTACATGATTGGAATGATGAGCTCTGCTTGAAGATATTGAAGAACTGCAAAGAAGCAATTTCAGGAAAAGGGAAAAAAGGAAAGATAATAATCATTGATATATCAATTGATGAAACAAGTGAAGATCGTGAATTAACTGAGCTACAATTGCACTTTGACTTGGTAATGATGACTCTACATAatggaaaagaaagaaacaagaaagaATGGATTAAACTCATATATGATGCAGGCTTCACCAACTATAATATTACTCCCATATGTGGCTTCAAGTCTCTCATAGAAGTTTATCCTTAA 1104 0.3361 MDLKSINSNEENHVYHAQMHLYKHIYSFLSSMALKSAVELGVIDVIHKHGKPMTLSELVSSLKLHPSKVSVFYRFLRLLTHNGFFAKTTVLKAKEDEEVEEETTYALTPPSMLLINGESPCFTTLFNVILHPSAMDMWHSSKKWFGEEKELGLYESATGETFFDFLNKDSETYILSMFQGFMAADSQMMKFALKDCNHVFEGLESLVDVAGGTGVVSKLILEAFPNIKCTVLDQPQVVANLSGTQNLNFVCGDMFKFIPPADAVLLKWVLHDWNDELCLKILKNCKEAISGKGKKGKIIIIDISIDETSEDRELTELQLHFDLVMMTLHNGKERNKKEWIKLIYDAGFTNYNITPICGFKSLIEVYP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00854 367 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 6 367 - -
Tsu06g00854 367 PANTHER O-METHYLTRANSFERASE 6 367 IPR016461 GO:0008168
Tsu06g00854 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 367 IPR016461 GO:0008168
Tsu06g00854 367 Pfam O-methyltransferase domain 138 348 IPR001077 GO:0008171
Tsu06g00854 367 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Tsu06g00854 367 Gene3D - 3 114 IPR036388 -
Tsu06g00854 367 PIRSF O-mtase 1 367 IPR016461 GO:0008168
Tsu06g00854 367 Gene3D Vaccinia Virus protein VP39 116 367 IPR029063 -
Tsu06g00854 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 366 IPR029063 -
Tsu06g00854 367 SUPERFAMILY "Winged helix" DNA-binding domain 12 118 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00854 Tsu-Chr6 7651206 7654399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00854 32 353 Monolignol Biosynthesis Gene Families AT5G54160 31.498 4.64e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00854 K22588 - gmx:106795493 508.449