Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00844 ATGGCTTCCACAGCAACACCTTCTCTACAGATTCTATTATTCAATCCAATCTTAGGaaacatcaaaacaacaaaaggaaTAAGGTTTTTTAGGATAACAAAAACCACAAACACTCACACAAGTTTACAAGTTCATGCTTCTAAGGACTCTCAAGGACCCCAAAAAGTACCATCTGGAGTTGACACAAGAATTCATTgggataatgatgatgaaggttgGATTGGAGGTAGcactaaacaaaaacaaaccaatGAAGATGTGAAACCTAAGAAGCTTTTGGGTGAAGATTTTGCTGATTTGCTTAGTTTTCAAGGTTCTCATTATGAATTCTTAGGAGTACCACCAGAATCTAGTGCTGAAGAAATCAAAGTAGCATTCAGGAAACTATCAAAGGAGTATCATCCAGACACAACTTCCCTCCCTCTAAAAACAGCATCAgaaaaattcatgaaattaagAGAGGTTTACACTGTTCTCAGCAATGAAGAAAGTAGAAGATTTTATGATTGGACCCTAGCTCAAGAGGTTGCAAGTCGTCAAcaagagaaattgaaaattaaatttgaggATCCTTATGAGGTAGCATTGAAGAATTATGAACCTGTTCCAGATATGGTTGATAGACTTGGTGGAAAGAATATGAAGCTTAGTGATCAAGCTGTTTCTGCTATCACTATTGatgtttttatcattattttttctatatgtTGTATCACTTATGTAGTTTTATTTAAAGAATATTAG 744 0.2997 MASTATPSLQILLFNPILGNIKTTKGIRFFRITKTTNTHTSLQVHASKDSQGPQKVPSGVDTRIHWDNDDEGWIGGSTKQKQTNEDVKPKKLLGEDFADLLSFQGSHYEFLGVPPESSAEEIKVAFRKLSKEYHPDTTSLPLKTASEKFMKLREVYTVLSNEESRRFYDWTLAQEVASRQQEKLKIKFEDPYEVALKNYEPVPDMVDRLGGKNMKLSDQAVSAITIDVFIIIFSICCITYVVLFKEY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00844 247 SMART dnaj_3 105 164 IPR001623 -
Tsu06g00844 247 Pfam DnaJ domain 107 169 IPR001623 -
Tsu06g00844 247 ProSiteProfiles dnaJ domain profile. 106 172 IPR001623 -
Tsu06g00844 247 PRINTS DnaJ domain signature 108 126 IPR001623 -
Tsu06g00844 247 PRINTS DnaJ domain signature 126 141 IPR001623 -
Tsu06g00844 247 PRINTS DnaJ domain signature 144 164 IPR001623 -
Tsu06g00844 247 SUPERFAMILY Chaperone J-domain 106 175 IPR036869 -
Tsu06g00844 247 Gene3D DnaJ domain 100 193 IPR036869 -
Tsu06g00844 247 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 26 246 IPR044618 -
Tsu06g00844 247 CDD DnaJ 107 161 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00844 Tsu-Chr6 7578766 7581383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00844 107 174 C2H2 Transcription Factor Family AT1G74250 37.500 3.16e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00844 K23051 - gmx:100819309 289.656