Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00812 atGGCGAGCTTTTTGACTGATTTGGCGAAGCCATATGTGGAGAAATTGACAAATGGGGCAATTGCAGAAGCAAGTTATATATGTTGCTTCACGTGCATTGCTAaggattttgaagaagaaaaaattaggtTGGAAGTAGAAAGGAAAACTGTCAAGCAACGTGTTGATGTGGCAACCAGAAGTGGAGAAGATGTTCAAGGTAATGTTCTTTTTTGGGAAGAAGAAGCTGAAAAGCTCATTCAAGAAGacaccaaaacaacaaaaagatgtttttttggattttgttccCATTGCATATGGCGATATAGAAAGGGAAAGGAACTTGCAAATAAGAAGAAGCAAATTAAGATATTGATGGAAACTGGAAAAGAACTTGCAATTGGACTCCCAGCTCGTCTTCCAGATGTTGAGCGTTATTCATCCCAACACTATATTCCTTTTAAAAGCAGGGAATCCAAATACAAAGAGCTTTTGGATGCACTGACAGATGAGAACAATTATATAATTGGGTTGAAAGGGATGGGGGGCACGGGAAAAACTACATTGGCCAAAGCAATAGGTAAAGAACTCAAGCAGTCCAAACAATTTACGCATGTTATTGATACGACAGTGTCATGTTCTcctgatattaaaaaaattcaagatgATATTGCTGGACCCTTGGGGTTGAAATTGGATGACTGTAGTGAATCTGACCGTCCCAAAAAAATATGGAGCAGATTAACCAAAGGTGAGAAGATTCTTCTAATAATGGATGATGTGTGGGGAGATATCGATTTTGATGAAATAGGGATTCCATATATTGACAATCACAAAGGCAGTAGAATTCTTGTAACCACACGCAATATGTTGGTTTGCAACAGATTAGGATGCAGTAAGACAATCCAACTGGATCTCTTATCTGAAAAAGACACATGGATCATGTTCAAAAGCTATGCTGGGCTAAGCGACAAATCAACTAAAAATTTGCTTGACAAGGGTCGTAAAATTGCAAATGAATGCAAAAGGTTACCAATTGCAATTGCTGCTATCGCCAGTAGTTTGAAGGGCGAACAACGTCAGGAAGAGTGGGATGCGGCCTTAAACTCCTTGCAGAAACATATGCCCATGCACGGTGTTGATGCTGAACtggttaaaatttataaatgctTGAAGTTTAGCTACGATAATTTGAAGAATGAAAAGGCCAAGAGACTATTCCTCATGTGTTCTGTATTtcgagaagatgaagaaattccTATCGAAGGGCTAACTAGACTTGGCATAGGAGCAGGCCTTTTTGGGGAAGATTATGGAAGCTACGAAGATGCTCGAAGTCAAGTATTGACATCCAAAAATAAACTCATAGATTCTTGTTTATTGTTGGAGGCCGGTCGAAGTGGAGTGAAAATGCATGACTTGGTTCGTGATGCAGCCCAATGGTTAGCGAACAAAGAGATTCAAACGATAAAGCTATCTGATAAAAATCAAAGGGCAATGGTTGAAAgggagaaaaatattaaatatttgttatGTGAAGGCAAGCTAAAGGATGTTTTTTCCTGTAAGATTGATGGTTCCAAGCTTGAGATTCTAACTCTCACTGTGCATAACGATGAAGACTGCCACGATGTGAAAATCGAAGTACCAAattcattttttgaaaataatgttgGCCTTCAAGTTTTTCATTTATTCTGTAGTCATTATCCTGGGCTAGCTCTATCATTACCTCAATCAATTCAGTCGTTGAAGAATATTCGATCTCTTCTCTTTAAGGGTGTCATCAATTTGGGTGATATCTCTATTGTGGGAAATTTGCAAAGTCTTGAGACACTTGATTTGGACGATTGTATAATTGATGAATTGCCACATGGAATTACAAAACTGGAGAAATTTAGATTGTTGAACTTGGACACTTGTAAAATTGTAAGGAATGATCCATTTAAAGTGATTGAAAGATGTTCATCACTTCAAGAGTTATATTTCAGGGACAGTTTTAATGAATTTTGCCTAGAAATAACTTTTCCTAAACTGCAAAGGTTTTGTATCGATGAAAATTGGGATTCGGTCaatggttcatcatcaaagTATGTGTATTTTGAACACAACGATGAGGTTTTCCTATCTGAAACAACACTCAAGTACTGTATGCAAACAGCTGAGATTCTTAGATTAAGAAGAATCGAGAAGGGATGGAGAAATCTCATACCCGAGATTGTTCCTGTAGATCAAGGTATGAATGATCTAGTTGAGCTTAATTTGAGTTTCATTTCACAACTACGGTGCCTCATTAACTCTACGCATACTGATTCTCAAGTACCAAATATGTTCTCCAAGTTGGTTGTGCTAAAGctcaaaaaaatggaaaatttggAAGAGTTGTGCAACGGTCCACTTTCATTTGACTCTCTAAAGAGTTTAGAGAAGCTATCAATCAAAGGTTGTGAACATTTGCATAGCTTATTTAAGTGCAACCTAAACCTCTGCAATCTAAATAGGGTGTCATTGAAGGAATGCCCGATTTTGATCTCCCTGTTTCAAGTGTCAACTGTTCGTTGTCTAGTGTTGTTGGAGATTTTGGAAATAAGTGACTGTAGGTGTCTTGAATACATAGTAATAGATGAAAGGAAAAGGGAGGAATCAAGAGGTGAAatagttgatgatgatgatagcaAAAGTCGCGACTCAATGTTTCCAAAACTGAAAGTTCTTAAAATTGAGGAGTGTCCAGGACTTGAATTAATACTACCATTTCTATCTACTCATGATGATCTTCCGGCACTAGAATCCATTATATTGAAAAGATGTGATAAGCTGAAATACATATTTGGCCAATATGTCAAACTTGGTTCCCTAAAAATTATGGAGCTTGATGGTTTATCAAATTTGATCGACATTTACCCAGAATGTTATGGTACCATATCTTCATCGATTAAGGGGCCTTCTTCCATCTCTAGAGATGCTTCCAAGCCACAAAAACAATCTGACCCTATCAAATGCAATATCTTTTCATGGACAATCAGTACTGCATGTACTAAAACCCCATTGGTTTCTGAGGATCAACCACATCAAAACTTAATTCCAACGGAATCAAATTCATATTGCCTTAACATATGGGAACGAGCTCAATGTCTTTCAAGACAACCACATAACCTGTGCAATATTAAAGAGATTATATTGTGCAATATTTCGAAGATAAAATCAGTGTTTATCTTGTCTATTGCTCCAATAATGTTGTTGGAAACTTTGACAATTAAAGGTTGTGATGAACTGAAGCACATAATAATAGACACTGGAGATCATGACAGTGGTAGCAAAAACTTGGGCAATGTCTTTCCAAAATTGAAATCAGTCTACATTAATTATTGTGTGCAACTGGAATACATATTTGGACACTACACTGATTGTCATCAAAACCAATGTGAGATTCACCTTCATGTTTCATCTTTAGAATGTCTCAGTCTTTGCAATCTGCCAAATTTTGCCGCCATGAGTTCCAAACAATATTACATAACATTTCCAACTTTGAAAAAACTTGCACTCGAAAAATGCTCCCGGGTTGCTAATGTCAAATCTATTGGTGATTTCATATCTCATCGTTTGGTAGCAAGATCTGTGGACAGTACAATCATGAAGGAATTGAGTGGCAACACGGAGCATTTTCTCGGCTTAGAAAGTCTCAAGGTATATAACTCCAAAGTAGAAAGTATATTTTTCCTCAATGAAGAAAATGGACAGCAGATGAACTTGGGGTTGCAATACATAGTGTTGTGTGATCTGCTCATGATGAAGTGTCTTTTTGTGGGTGCCAACAATGCTTTTGCCCTCAAAAACCTTACAAGGATAGAAATCGTGCGTTGTGAAAAATTGGAAATTGTATTCTCCACTTCTATTTTAAGATCTCTGCCACAGTTGCTTGATCTAAGAATAGAAGAATGCAAAGAGTTGAAGCATATTGTCGAAGATGATGATTCAGagaataaaaaatcatcaaatacAAAGACATGCTTCCTAAAACTAAATACACTTGTTGTAATAAAGTGCAACAAGTTGAAATATGTTTTTCCAATCTCCATATGTAAAGAGCTTCCTGAGCTAGCTGTTCTAGTGATAAGAGAAGCAGATGAGCTAGAGAAAATAGTTGCAGGTGAAGGTGATGATCAGAAAGTGGAGATTCCAGAGCTGAAATTTCTTGCATTGCTCAACCTACCAAGCCTCTGTCAGACACAAGAAATTCAATTTGAGGCTGTAAAAGACCGTTTTgtacaaaattgtaaaaaactCTCTCTGACTACCGCGTTAACTCCCAAGAACATTTTCATTTCTTATGTTGGTTATTTAGGGGAGCTTGATAGGGATGTGCGTAGTCTATATTGCCTATTTATAAAAGAGTCCAAATGCCATGATACTGGTAATGAACATCCAAGTAATTCAAAAACCACCAAACATTTTGCCGCTGTGATTGAAGTTCAAGTAGCATCAGAACCCGAGTTGACATCTTCACAGGAGTTGATGAATGAAAAATCACTGGATCAACAGTGTATGATGGACCAACAACATTCACTTGAAGAAACTGATTGTAGAACATCTTCACAGGAAGATTGCGATGGCCAAATAGCCGCAACTTCATTTTCCATTGCTACTACAGAGTCAAATGATCAAGTTTCGTTAAACGATGATGTTGCCTTGAGAGTAAGCTCAGTTGTTGAGCCACAGTTTCCTAAGGAGGACGAAATTGTAGTGTCCAAATCAAGACCATCTTCTATTGCATCTCAGTGTCCTTCAAAGCCTTCTGAAGGTGATTCTTCTCATATAGTAGAAGATTCAAATTCTTTACTTGTCACAAGGGAGCTTGAGCAACTAGTCTTCAAGAAGCATTTGGATTATGAGAACATGTCTTTGTTGACCGATTTCTTTACCAAGCATCCTTATGTTCTTCTAAAGGATGCTTCACTTAGTAACAGATACAAGGGTTATGCCTACAACTGTCTTTCTGAGCTATTGAAATTTCTCCAAAGGCATAGTGTGTCGGATGTGGTAGGTTCAAGCCACTCTGAATTTATTGAGTTATTACAAGACGTGCGcaaattttcctttgataataAATGGTTGGATGGTATCGAAAAACACGCTTTGTTTCCTGGTTTACAAGTCTCTGAAGCTGCATTGCAAAAATTGTTGGACTCAAAACAGATGTTGACTCAACATGTAGAGGATCTTAAGCATCAATTGGCTTCCACTGAAGCTGTTTTGGAGAGTATCATTCAACAGGAGGCACAGATTTTAGAAACTCGGGCTGCTTTAACCGATCCTATTGGCTTTTAG 5307 0.3593 MASFLTDLAKPYVEKLTNGAIAEASYICCFTCIAKDFEEEKIRLEVERKTVKQRVDVATRSGEDVQGNVLFWEEEAEKLIQEDTKTTKRCFFGFCSHCIWRYRKGKELANKKKQIKILMETGKELAIGLPARLPDVERYSSQHYIPFKSRESKYKELLDALTDENNYIIGLKGMGGTGKTTLAKAIGKELKQSKQFTHVIDTTVSCSPDIKKIQDDIAGPLGLKLDDCSESDRPKKIWSRLTKGEKILLIMDDVWGDIDFDEIGIPYIDNHKGSRILVTTRNMLVCNRLGCSKTIQLDLLSEKDTWIMFKSYAGLSDKSTKNLLDKGRKIANECKRLPIAIAAIASSLKGEQRQEEWDAALNSLQKHMPMHGVDAELVKIYKCLKFSYDNLKNEKAKRLFLMCSVFREDEEIPIEGLTRLGIGAGLFGEDYGSYEDARSQVLTSKNKLIDSCLLLEAGRSGVKMHDLVRDAAQWLANKEIQTIKLSDKNQRAMVEREKNIKYLLCEGKLKDVFSCKIDGSKLEILTLTVHNDEDCHDVKIEVPNSFFENNVGLQVFHLFCSHYPGLALSLPQSIQSLKNIRSLLFKGVINLGDISIVGNLQSLETLDLDDCIIDELPHGITKLEKFRLLNLDTCKIVRNDPFKVIERCSSLQELYFRDSFNEFCLEITFPKLQRFCIDENWDSVNGSSSKYVYFEHNDEVFLSETTLKYCMQTAEILRLRRIEKGWRNLIPEIVPVDQGMNDLVELNLSFISQLRCLINSTHTDSQVPNMFSKLVVLKLKKMENLEELCNGPLSFDSLKSLEKLSIKGCEHLHSLFKCNLNLCNLNRVSLKECPILISLFQVSTVRCLVLLEILEISDCRCLEYIVIDERKREESRGEIVDDDDSKSRDSMFPKLKVLKIEECPGLELILPFLSTHDDLPALESIILKRCDKLKYIFGQYVKLGSLKIMELDGLSNLIDIYPECYGTISSSIKGPSSISRDASKPQKQSDPIKCNIFSWTISTACTKTPLVSEDQPHQNLIPTESNSYCLNIWERAQCLSRQPHNLCNIKEIILCNISKIKSVFILSIAPIMLLETLTIKGCDELKHIIIDTGDHDSGSKNLGNVFPKLKSVYINYCVQLEYIFGHYTDCHQNQCEIHLHVSSLECLSLCNLPNFAAMSSKQYYITFPTLKKLALEKCSRVANVKSIGDFISHRLVARSVDSTIMKELSGNTEHFLGLESLKVYNSKVESIFFLNEENGQQMNLGLQYIVLCDLLMMKCLFVGANNAFALKNLTRIEIVRCEKLEIVFSTSILRSLPQLLDLRIEECKELKHIVEDDDSENKKSSNTKTCFLKLNTLVVIKCNKLKYVFPISICKELPELAVLVIREADELEKIVAGEGDDQKVEIPELKFLALLNLPSLCQTQEIQFEAVKDRFVQNCKKLSLTTALTPKNIFISYVGYLGELDRDVRSLYCLFIKESKCHDTGNEHPSNSKTTKHFAAVIEVQVASEPELTSSQELMNEKSLDQQCMMDQQHSLEETDCRTSSQEDCDGQIAATSFSIATTESNDQVSLNDDVALRVSSVVEPQFPKEDEIVVSKSRPSSIASQCPSKPSEGDSSHIVEDSNSLLVTRELEQLVFKKHLDYENMSLLTDFFTKHPYVLLKDASLSNRYKGYAYNCLSELLKFLQRHSVSDVVGSSHSEFIELLQDVRKFSFDNKWLDGIEKHALFPGLQVSEAALQKLLDSKQMLTQHVEDLKHQLASTEAVLESIIQQEAQILETRAALTDPIGF 1768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00812 1768 PANTHER - 1144 1325 - -
Tsu06g00812 1768 Gene3D Ribonuclease Inhibitor 468 715 IPR032675 -
Tsu06g00812 1768 PANTHER - 60 964 - -
Tsu06g00812 1768 Gene3D Ribonuclease Inhibitor 716 979 IPR032675 -
Tsu06g00812 1768 Gene3D - 134 296 IPR027417 -
Tsu06g00812 1768 Gene3D - 299 392 IPR042197 -
Tsu06g00812 1768 MobiDBLite consensus disorder prediction 1578 1598 - -
Tsu06g00812 1768 PRINTS Disease resistance protein signature 241 255 - -
Tsu06g00812 1768 PRINTS Disease resistance protein signature 334 348 - -
Tsu06g00812 1768 PRINTS Disease resistance protein signature 168 183 - -
Tsu06g00812 1768 PRINTS Disease resistance protein signature 796 812 - -
Tsu06g00812 1768 Coils Coil 1717 1751 - -
Tsu06g00812 1768 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 60 964 - -
Tsu06g00812 1768 Pfam NB-ARC domain 153 390 IPR002182 GO:0043531
Tsu06g00812 1768 Gene3D Ribonuclease Inhibitor 1166 1377 IPR032675 -
Tsu06g00812 1768 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1144 1325 - -
Tsu06g00812 1768 SUPERFAMILY L domain-like 463 962 - -
Tsu06g00812 1768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Tsu06g00812 1768 Coils Coil 34 54 - -
Tsu06g00812 1768 CDD SIMIBI 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00812 Tsu-Chr6 7263576 7271400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00812 169 584 WRKY Transcription Factor Family AT5G45050 23.095 5.07e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00812 - - mtr:MTR_3g062420 1982.61