Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00785 ATGGGGAAGAAATCACTTGCTGCCTTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATTGTGGTGACAGAGGCACAAAACAAATGTGAGCATTTGGCTGATACATATAGAGGACCATGCTTCACTAATGCTAGCTGTGATGATCACTGCAAGAACAAAGAGCATTTTCGTAGTGGCACTTGCCATAACCTTCAATGTTGGTGCACTCatcaaaaatgttaa 228 0.4123 MGKKSLAALSFLFLVLFVAQEIVVTEAQNKCEHLADTYRGPCFTNASCDDHCKNKEHFRSGTCHNLQCWCTHQKC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00785 75 CDD Knot1 40 71 IPR003614 GO:0006952
Tsu06g00785 75 SMART gth_4 30 75 IPR003614 GO:0006952
Tsu06g00785 75 PANTHER DEFENSIN 1 73 - -
Tsu06g00785 75 Pfam Gamma-thionin family 31 72 - -
Tsu06g00785 75 Gene3D - 29 75 IPR036574 -
Tsu06g00785 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Tsu06g00785 75 SUPERFAMILY Scorpion toxin-like 30 72 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00785 Tsu-Chr6 7027779 7028878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00785 4 64 Plant Defensins Gene Families AT2G26010 40.625 3.45e-08 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00785 - K16669 gmx:100779239 103.219