Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00778 ATGATTATAGAAATTTTGGGTTACAATAGTATTATTAGTTGTTTTATTATTGGATTATTGTTTCCTAAAGAAGGTAAAACAGCTAGAACATTGATACATAAACTTGGTTAttcaatttacaattttgtcCTTCCTGTATACTTTGGTTATTTGGGTTTACAATGTGACCTCATAAATGTGTTTAGAAGCTTGGATAGAACAACCAATGTAGCCATATTGATTTTGTTGAGTATTGGTAGCAAACTTGGTGGCACTCTTTTGGCTTGTCGTTACCTTCATATTTCTACAAATGAAGGGATTTTTATTGGCTTCATATTGAACACTAGAGGTTATGCTGATTTATTGTTCTTTGGTGCTGCAGCAAAACAAGTCATTAGTTTTGATACAGAAGCTTACAATGTGTTGTTAGTATCAATAGTATTCAACACAATAATATCAGGAATAATTGTGGCTTTTCTATCAAAGGGAGAAGATAAAATGTTTACAAACAATCATACTGCAATTGAACCACAACAAATGGAGAATGAGCTTCGGATTTTGGCTTGCGTATACGATCCGCGTCAAGTATCTACAATACTTTCAACAATACTAGCAATAAATGGATCTAAAACATCACCTTCTACAACTTATTTAATGCACCTAATAGAGCTTGTAAAGAAGATCAAGTCCAATTTGTTATatcatgaaaaagaaaatgacgAACTTAGTGACGAAGAAGATAGTTTTGGTGGCAATGATGTGGTTGACATTAATAATGCCTTAGATTCTTTCACTGCAGAGACAAAGATCTTGGTCTACCAAAAAAGGGCAGTATCTTCTTTTCCAATTTTGTATGAAGATGTGTGCAATGAAGCAGAAAATCTCCGAGTATCAATTATTCTTCTTCCTTTTCACAAGCATCAACGAATTGATGGAAAACTCGAAAGTGGCAAAGATGGTATAAGGACAACTAATCAAAAGATTCTTAGGCATGCCCCTTGTTCTGTTGGTGTTATTATAGAAAGAGGACTTAATATGTCGTTTGGTTTCTCGGAATTAATTCAATCCGATAACATGCAAAATGTGGCAACACTTTTCTTTGGTGGTGCAGATGACCGCGAAGCTATTGCTTGGAGCCTTCGTATTTCCAAATGTCCTTGCGTTAACATGACAATCATTAGATTTTTGTTGTCATCTTCTTCATCGGAAAATGAACAAATTGTCGAACGTGGTGTGCAAtatgaggaaaaagaaattttaatgtCATTGTCTGGGGAAGAATCCGTGAATGATGAAATTGACAATAACTTCATGGTCGATTTCTATAATCGGTATGTAGCTTCGGGAAACATTGGATATGTGGAAAATTTTGTGAaggatggaaaacaaacattgCAATGTTTGAAAGAGATTGGAGATACATACTCTTTGTTTATAGTAGGAAAGGGTAATAGAAGAAATAGTTCAATAACAATAGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTATTGGCTTCTTCAGATTTTGATATACATGGATCTGTTTTGGTCATTCAACAACATAGAAATGTCAAGAAAGGACTAATACATTCTTAG 1593 0.3296 MIIEILGYNSIISCFIIGLLFPKEGKTARTLIHKLGYSIYNFVLPVYFGYLGLQCDLINVFRSLDRTTNVAILILLSIGSKLGGTLLACRYLHISTNEGIFIGFILNTRGYADLLFFGAAAKQVISFDTEAYNVLLVSIVFNTIISGIIVAFLSKGEDKMFTNNHTAIEPQQMENELRILACVYDPRQVSTILSTILAINGSKTSPSTTYLMHLIELVKKIKSNLLYHEKENDELSDEEDSFGGNDVVDINNALDSFTAETKILVYQKRAVSSFPILYEDVCNEAENLRVSIILLPFHKHQRIDGKLESGKDGIRTTNQKILRHAPCSVGVIIERGLNMSFGFSELIQSDNMQNVATLFFGGADDREAIAWSLRISKCPCVNMTIIRFLLSSSSSENEQIVERGVQYEEKEILMSLSGEESVNDEIDNNFMVDFYNRYVASGNIGYVENFVKDGKQTLQCLKEIGDTYSLFIVGKGNRRNSSITIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRNVKKGLIHS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00778 530 PANTHER CATION/H + ANTIPORTER 1 520 - -
Tsu06g00778 530 Coils Coil 218 238 - -
Tsu06g00778 530 Pfam Sodium/hydrogen exchanger family 2 153 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu06g00778 530 Gene3D - 1 161 IPR038770 -
Tsu06g00778 530 PANTHER CATION/H(+) ANTIPORTER 1 1 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00778 Tsu-Chr6 6920107 6922019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00778 9 522 Antiporter Super Family AT1G16380 41.905 1.47e-140 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00778 - - mtr:MTR_4g029520 883.248