Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00758 ATGGAACGAAGCGGAAGTGTGCTTATGCAACGATACGAAATAGGGAAATTATTAGGTCAAGGAACCTTTGCAAAGGTCTATCATGCAAGGAACCTCAAAACCAGCATGAATGTTGCGATCAAAGTTATTGATAAGGAGAAGGTTCTGAGGGTTGGGATGATCGATCAAATTAAGCGTGAAATTTCAGTGATGAGACTCGTCAGGCATCCACATGTTGTCGAGCTTTACGAGGTAATGGCGAGCAAATCCAAAATTTACGTTGTTATGGAGTATGTAAAAGGTGGTGAACTCTTCGACAAGGTATCGAAAGGAAAACTAAAGCATGATGATGCAAGGAGATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGTCATAGCAGAGGTGTGTGTCATCGCGATTTAAAACCAGAAAATCTTCTGTTGGATGAAAATGGAAATTTGAAGGTCTCGGATTTCGGGTTAAGTGCACTTGCCGAGACTAAGCACCAAGATGGATTACTCCATACTACATGTGGCACTCCTGCGTATGTCGCTCCGGAAGTGATACACCGCAAGGGATATGATGGGATGAAAGCTGATATATGGTCGTGTGGTGTGATCCTTTATGTTCTCTTGGCCGGTTATCTTCCGTTTAGAGATCCAAATCTGATGGAGATGTATAGGAAAATCGGCAAGGCTGATTTCAAGTTTCCTAACTGGTTTGCATCGGATGTACGCAGATTGTTGTCGAAAATTCTGGATCCAAATCCAAAGACCAGGATATCAATTGCCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAGCCTATTGTTACTGACACGGACAAAACAGAACTAGCTCCTCTCGATGCTGATGGAGTATTCGGAGCTTGTGAGAATAGTGATCATGTGGATCTGTTGAAACCTTGTAACAATTTAAACGCTTTCGATATCATCTCCTTTTCATCAGGTTTTGACTTGTCTGGTTTGTTTgaggagaaagaaaaaaagaaagaaatacgATTTACGTCTAACAAGCCAGCTTCAATCATCATCTCcaaatttgaagaaatttgcAAGTGTCTCGGGctaaaactaaagaaaaaaGACGGAGGTTTGTTCAAGTTAGAAGGTTTGAAGGAAGGAAGAAAAGGACATTTGGGTATAGATGCAGAGATTTTCGAGATCACGCCAATGTTCCATTTAGTTGAGTTGAAAAAGTCGAATGGTGACACGTTGGAGTACCAAAAGCTGTTGAAAGATAATGTTAGGCCTTCACTTAAGGATATTGTTTGGACATGGCAAGGAGAACAGCCACAGCAATTGCAACATGGGATGGTGCAGAAAGAGGAACAACCATCTTCCTAA 1359 0.3966 MERSGSVLMQRYEIGKLLGQGTFAKVYHARNLKTSMNVAIKVIDKEKVLRVGMIDQIKREISVMRLVRHPHVVELYEVMASKSKIYVVMEYVKGGELFDKVSKGKLKHDDARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVIHRKGYDGMKADIWSCGVILYVLLAGYLPFRDPNLMEMYRKIGKADFKFPNWFASDVRRLLSKILDPNPKTRISIAKIMESSWFKKGLEKPIVTDTDKTELAPLDADGVFGACENSDHVDLLKPCNNLNAFDIISFSSGFDLSGLFEEKEKKKEIRFTSNKPASIIISKFEEICKCLGLKLKKKDGGLFKLEGLKEGRKGHLGIDAEIFEITPMFHLVELKKSNGDTLEYQKLLKDNVRPSLKDIVWTWQGEQPQQLQHGMVQKEEQPSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00758 452 Gene3D Kinase associated domain 1, KA1 308 430 - -
Tsu06g00758 452 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 441 - -
Tsu06g00758 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Tsu06g00758 452 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00758 452 SUPERFAMILY Protein kinase-like (PK-like) 8 275 IPR011009 -
Tsu06g00758 452 PANTHER - 2 441 - -
Tsu06g00758 452 CDD CIPK_C 311 425 - -
Tsu06g00758 452 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00758 452 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Tsu06g00758 452 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00758 452 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Tsu06g00758 452 CDD STKc_SnRK3 11 265 - -
Tsu06g00758 452 Pfam NAF domain 308 365 IPR004041 GO:0007165
Tsu06g00758 452 Gene3D Transferase(Phosphotransferase) domain 1 3 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00758 Tsu-Chr6 6763209 6764567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00758 1 437 CBL-interacting serine-threonine protein kinases AT5G58380 65.351 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu06g00758 Pkinase 1.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00758 K07198 - gmx:100815651 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00758 06 6763209 6764567 Tsu06g00758 06 6763209 6764567 ECH
Tsu06g00758 06 6763209 6764567 Tsu05g02989 05 40231889 40233283 ECH
Tsu06g00758 06 6763209 6764567 Tsu03g00784 03 7136311 7138994 ECH