Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00754 ATGAGGAATAACAAGTTTAAGCTCTCTGATATGATTCCAAATGCTTGGTTTTACAAGCTAAAGGAAATAGGTTGTAGTTGTCGAACAACGCTTGAATCAGTGTGGACAAAATCAGATTCTCCACACGAAAACTCTTCTTCATCTCCACTCGATAGTTTTACTGGGTCGGGGTCAGAATCCCCCGACCCAGAATTTAGAACAGACCGTGTTCTAATTCCAAACGAAACATCTTCGTTTGACGAAATGGTTTCATTGTCTACTTCTTCTTGTGCTTGTAACAAAATCTCCAACAACAACATTGATGATATTGTTATTGATGTTGACAAGAATTCACTAGCTAGAAAAGATGATAAACTTGAAAGGTATGATTATTCATATGATTCTTTTTCAAAGCTAGAACTTCCTCGTATCATTACAAAACCACCCATGAAAAAAGAACACAAACCCATCAAAGAAGAGTCTCTAAGgattaaaattttgaatcaaCAACTTCAAcatcaagagaagaaaaagaagaagaaaattggtTCATCAAATTCTCCTGGATTGAAACTTCGTTTAAAGTCACCAAGAATTGCTTCTACAAAGAAGGTTCAATTTCATCATGGCCGGAAAAGTACAACATCAATGGCAACTTCCGGCTACCGGAGAAGTTTCTCCGGTAGCCTGGCAATAGTGAAGTCATCTTTTAATCCTCAAAAGGATTTTAGAGAGTCAATGGTTGAGATGATTGTTGAGAATAACATAAGAGCATCTAAGGATTTGGAAGATCTTCTTGCTTGTTACCTTTCATTGAATTCAGATGAGTATCATGATCTTATTATCAAGGTTTTCAAGCAAATATGGTTTGATTTGACTGAAACAGGGTAG 870 0.346 MRNNKFKLSDMIPNAWFYKLKEIGCSCRTTLESVWTKSDSPHENSSSSPLDSFTGSGSESPDPEFRTDRVLIPNETSSFDEMVSLSTSSCACNKISNNNIDDIVIDVDKNSLARKDDKLERYDYSYDSFSKLELPRIITKPPMKKEHKPIKEESLRIKILNQQLQHQEKKKKKKIGSSNSPGLKLRLKSPRIASTKKVQFHHGRKSTTSMATSGYRRSFSGSLAIVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTETG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00754 289 Pfam Transcriptional repressor, ovate 229 285 IPR006458 -
Tsu06g00754 289 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 142 IPR038933 GO:0045892
Tsu06g00754 289 MobiDBLite consensus disorder prediction 37 61 - -
Tsu06g00754 289 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 171 287 - -
Tsu06g00754 289 Coils Coil 150 170 - -
Tsu06g00754 289 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 224 286 IPR006458 -
Tsu06g00754 289 MobiDBLite consensus disorder prediction 37 68 - -
Tsu06g00754 289 ProSiteProfiles OVATE domain profile. 225 284 IPR006458 -
Tsu06g00754 289 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 42 142 - -
Tsu06g00754 289 Pfam DNA-binding domain 1 35 IPR025830 GO:0003677
Tsu06g00754 289 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 171 287 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00754 Tsu-Chr6 6695772 6696929 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu06g00754 Ovate 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00754 - - cam:101506553 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00754 06 6695772 6696929 Tsu06g00754 06 6695772 6696929 ECH