Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00752 ATGTATAAGGGAAGAATAGGAGGCAAAGCTCAACCTGGATATGTTGAAACTGATCCTTCAGGTCGATATGGACGTTTTAGGGATGTCCTTGGCAAAGGAGCAACGAAGGTAGTGTATAAGGCATTTGATGAAATCCTAGGAATAGAAGTGGCTTGGAACCAAATCAAGCTTGATGAAGTTTTTCATTCACCAGACCAACTTCAACGCCTCTATTCAGAGGTTCATCTCCTAAAGAACTTGGATCATGACTCTATCATTACTTTCCATGGTACTTGGATTGATGCTGATTGTAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGAACCCTAAGAGAGTATAGAAAAAAGTACCCTCGTGTAGATATAAGAGCAATAAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAATATTTGCATAGCCATGATCCTCCTGTGATACATAGAGACCTAAAATGTGATAATATCTTTGTAAATGGCCATATGGGTAAAGTCAAGATTGGTGATTTAGGCCTTGCAGCAATTCTTCGTAGTTCACAACATGCACACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATATAATGAGCTGGTAGACATATACTCTTTTGGCATGTGTATGATTGAGTTGTTCACTTCTGAGTTTCCATATAGCGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTTACATCCGGGAAACTACCGGCTGCATTTTACAAGATCCAAGATTTAGAAGCCCAAAAGTTTGTTGGAAAATGTTTGGCAAATGTAACAGAGAGGTTGTCAGCACAAGAGCTCTTGTTGGACCCATTTTTAGCCACAGCCCAATGTGACTCACCATTGCCTAGTCCAACATTACCTAGCAAACATTCTCACAATTTCAATGCTACAATGGCCAAAGAGAAACCTTTACTCAATGATCAAACAAAGAGCACACATATGACAATTACAGGGACTGTGAATGAAGAGGATGACAATGTTTTCCTTAAagtcaaaatttcaaataaaaacgGTCACACAAGAAACATATACTTTCCATTTGACATAAGAAATGACACTGCAATTGAGGTTGCAAATGAAATGGTCAAAGAATTAGAAATTAGTGACTTGGAACCACTAGAGATTGCTGAAATGATTGAAGAAGAGATATCAACTATAGTTCCAACATGGAGGGGTTGTGACACTTCTAAGTATCAAAGACATCATAGTTTTAACTATGGAGAAGAGGATGATATGAGTAATCACAGTCCTTTTTTCTCACCATCTTCTCGTTCTTCATCTCATGGATCTCTTCCTATGTTTTATGCTTCATTCAACAACAATACACACCTTTGTGGGAACCATTATCCTTTTCCTCAAGATTGGTCACAAGATGATCATCAATTTATGAATGATGATGTAAGCTCTCAAAGCTCAATCAATTCCTACAAGTGTTTCAATTTCCATTGCAATGACTCATGCAATGAAGATGAACAAGGTTCAACTCATCATATAGTAGGAGAAGAAACCTTTTGTTGCAATCAAAAGGGTAACAACAAATCAACAAGATTTTGTCCTCCAGAAGAAATGGTGGAAGCTGGTTTCATCAAACAATTTTGCAACATGAGAATGAATTCTCACACTCACACTCATAAGAATCATCATGGACCAATCAATAGATGTCCAAGTCCAAGGTTGACAAGGATTAATTCATGTCTTGATGTGAGGAAACAGCAACTACAACGATCATTGATGGAAGAGATGCAAAAGAGAAGGATGTTCAATACAGTTAGTGCTATTGAGAATATTGGATTTCAAAATCCAGAAGGAGATGGATGTTTTTCTTGTTGA 1860 0.3763 MYKGRIGGKAQPGYVETDPSGRYGRFRDVLGKGATKVVYKAFDEILGIEVAWNQIKLDEVFHSPDQLQRLYSEVHLLKNLDHDSIITFHGTWIDADCRTFNFITELFTSGTLREYRKKYPRVDIRAIKNWARQILSGLEYLHSHDPPVIHRDLKCDNIFVNGHMGKVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPAAFYKIQDLEAQKFVGKCLANVTERLSAQELLLDPFLATAQCDSPLPSPTLPSKHSHNFNATMAKEKPLLNDQTKSTHMTITGTVNEEDDNVFLKVKISNKNGHTRNIYFPFDIRNDTAIEVANEMVKELEISDLEPLEIAEMIEEEISTIVPTWRGCDTSKYQRHHSFNYGEEDDMSNHSPFFSPSSRSSSHGSLPMFYASFNNNTHLCGNHYPFPQDWSQDDHQFMNDDVSSQSSINSYKCFNFHCNDSCNEDEQGSTHHIVGEETFCCNQKGNNKSTRFCPPEEMVEAGFIKQFCNMRMNSHTHTHKNHHGPINRCPSPRLTRINSCLDVRKQQLQRSLMEEMQKRRMFNTVSAIENIGFQNPEGDGCFSC 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00752 619 CDD STKc_WNK 22 282 - -
Tsu06g00752 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tsu06g00752 619 Gene3D - 333 401 - -
Tsu06g00752 619 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00752 619 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Tsu06g00752 619 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Tsu06g00752 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 611 - -
Tsu06g00752 619 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Tsu06g00752 619 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00752 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 7 611 - -
Tsu06g00752 619 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00752 Tsu-Chr6 6673188 6678748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00752 13 424 MAP Kinase Kinase Kinase AT3G51630 68.916 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tsu06g00752 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00752 K08867 - gmx:100816187 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00752 06 6673188 6678748 Tsu06g00752 06 6673188 6678748 ECH
Tsu04g01533 04 16133147 16138508 Tsu06g00752 06 6673188 6678748 PCT