Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00726 ATGTACCCAACAAACCTTGTTGTTCTTTCATCTCAGAACTTGAAAGAATGTACAAACAATTTCAATCTAAGCAATCTCATTGGGTTGACACAATTTGGAAGATTGTTTAGAGGAAACTTTCAAGGTCAACATGTATTAGTGAAGATATTGGATGATGAAAAATTGAAGCACATAAGTTCTAAATATAATGATGAACATTTCATTATCAAAGAGGAAATAAAGTTTTGGACAAATCCAAATTTGAAAGATTGTCCTAACTTGACTACTTTCATTGGTTATACTTGTGAGAGAGATATAAAAGGGGTTGTGTATGATATTAATCCTATTGATACTTTGGACAATGTAATCAAGAAAGATGGAATGAATTGGGTTCAGAGAATAAATGTAATTCATGAGGTTGCTAAGCTCTTGAAGTTCATTCATGACAAAGAGAAACAAAACATGGTGTTGAATATTAGTGCATCTCATATACTTCTTGATAAGGATTTAAAGCCAAAATTATTCGACTTGCAGTTGCTTAGTGAAGTGAAAATGCTAAAGGAACAATCAACAATGTCAACTAGCTATATTGATCCTTGTTTAAGGGGTGGTGAATGGGATAGAAGCTGTGAAGTGTATTCATTTGGCATACTTTTGCTTCAACTAATAACAAAGAGAATTTCAAACATTGggaacaaagaaaaacatacAAGCTTAAATATGGATAATAATCTAATACATATTTGGGCTAAGAAAGAGTTCAAGCCAAATTGTTCTCTTGTTCATAAACATTTACAAGAAGATTGGCTTTATTGTTCTGAAGATGGTGTTGCAATAACTCTATTGGCTTTGCATTGCATTGAATATTTTCCAACAAATCGTCCTTCAATGAGGGGTGTGTTGCAAAATCTTGAAAATCTTTCAGTGTTAGAACATTTGTCTGATGCTAGATCAactaaaaggaaaaagaaattattttcatCTTGA 966 0.3075 MYPTNLVVLSSQNLKECTNNFNLSNLIGLTQFGRLFRGNFQGQHVLVKILDDEKLKHISSKYNDEHFIIKEEIKFWTNPNLKDCPNLTTFIGYTCERDIKGVVYDINPIDTLDNVIKKDGMNWVQRINVIHEVAKLLKFIHDKEKQNMVLNISASHILLDKDLKPKLFDLQLLSEVKMLKEQSTMSTSYIDPCLRGGEWDRSCEVYSFGILLLQLITKRISNIGNKEKHTSLNMDNNLIHIWAKKEFKPNCSLVHKHLQEDWLYCSEDGVAITLLALHCIEYFPTNRPSMRGVLQNLENLSVLEHLSDARSTKRKKKLFSS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00726 321 Gene3D Phosphorylase Kinase; domain 1 3 106 - -
Tsu06g00726 321 Gene3D Transferase(Phosphotransferase) domain 1 108 309 - -
Tsu06g00726 321 ProSiteProfiles Protein kinase domain profile. 21 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00726 321 PANTHER RECEPTOR-LIKE KINASE 4 307 - -
Tsu06g00726 321 PANTHER OS01G0588500 PROTEIN-RELATED 4 307 - -
Tsu06g00726 321 SMART serkin_6 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00726 321 Pfam Protein kinase domain 24 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00726 321 SUPERFAMILY Protein kinase-like (PK-like) 13 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00726 Tsu-Chr6 6383709 6386164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00726 14 306 Receptor kinase-like Gene Family AT4G23320 25.574 1.32e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu06g00726 Pkinase 1.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00726 - - gmx:102662076 459.529