Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00717 ATGAAGGACATGCCCTTACCTTTTGAGGAATTTCAAGTGAAGGGAGGAGTGTTAGATTATTTCTCTTCAACTTCAAATTCAGCTTCAGATTCATTTTCATTGCTTTTGAATCAACCACAAGagcaacaaaatcaacaaaattggaCATTAGATAAAGAAGATTATTGCTATGTGGAGCCCACTTCTGTTCTTGATTCAAGAAGAAGCCCTAGTCCTCCAATTTCATCTTCAACAATGTCATCTTCTCATGGTAGTGGTTCAAACAATAACAACACTTCAATGGTAGTTGTTTCTGAGAATCTTGCTCCTAATCTTTCAAATGAAGAAGGTTTGGAGAATAGTGGTGAAAAATGTGGTGGTATGAGAATGGAAGATTGGGAGGGACAAGATCAGTCACTTTTAAGGTTAATTATGGGAGATGTTGAAGACCCTTCTGTTGGTTTGAACAAAATCTTGCAAAATAGTGGTGTTGGTTCTCAAAATGTTGATTTTCATGGTGGTTTTGGTGTTTTGGAACATCAACAAGGTTTGAATAATAACATGGAAGGTTCTGTTCAACAAGGGAATTACAATGTTTTTCCTTTCATGGCTGAAAACATAGATAGTCATAATGCTAAATCTGGTCCTGAATCTATGTTTGGTAACTATCCTATGTTGACATCATCGTCGACTTCTGGTGTGTTTTGTTCTCAGCAGCAACAGAATCAAGAGTTTGGTGTTGTTGATGATAAGCCTCAAGttattaaccctaattttatgATGAATCATAATCAAGTTCAATTCTCGGAGAATCCTTCGTTCTTTGTTCCATTGCCATATCCTCAAGTGCAAGAGCAACAAGTTTTCGCTCAGAATCAGTTGAAACGACCGCATTTCGATATGGTTGGGAACAATTATTCTGTGCCGAGGTTACCGCTTTTGGATTCTGGCCAAGAAATGTTTGCTAGGAGGCATCAGCAACAAACACAGCTTCCATTGTTTCCTCATCATCATCTGCAGCAGCATGAACAACAATCATCGGTTGTTCCATTTGCGAAGCAGCAGAAGGTGAGTTCTACTATTGCCGGAGACGACGCAAGCAACCAGCTTCAGCAGAGTATATTTGATCAACTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTCAAAGGGCTTCTTTCTATGTGAAGGAAGCCTTACAGTTAATGCTTCATTCGAACGGTAACAATCTCAATGTTTTTTCACCGATTAGTTTCATATTCAAAATTGGAGCTTACAAGTCTTTTTCCGAGATATCACCTGTTCTTCAGTTCGCCAACTTTACTTGTAATCAAGTCCTAATTGAAGCTTTGGAAAGGTTCGACCGAATTCACATTGTTGATTTCGATATAGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAACGGTACACCTTCACTTAAGATTACTGCTGTTGTATCGCCCTCGTCTTGCAACGAGATTGAGCTCAATTTCACTCAAGAAAATCTGATTCAGTACGCGAAAGACCTCAACATACCGTTTGAGTTCAGTATTTTGAACATGGAATTCTTGAACTCTCCGTCGTTTCCTCAACCAGCTCATTTCTTTGATAGTAACGAGGCGATTGGTGTGAACTTGCCTGTTTCAAGTTTCATAAGTTATCCATCATCTTTCCCTTTGGCCCTTCACTTTGTCAAGCAGTTAAAGCCCAAAGTGGTtgtcactttggacaaaaattgTGACCGACTCGATGTTCCGCTTCCAACCAACGTTGTTCATGTTCTTCAATGTTACTCATCCTTGCTCGAATCACTTGATGCTGTAAACGTGAACCTCGACGTACTCCAAAAGATTGAGAGGCATTTCATCCAACCAAACATCAACAAAATCATCCTCGGTCACCACCACCGTTCGCACGAGAAATTACCTCCGTGGAGGAACATGTTTCTTCAATCCGGTTTCTCTCCTTTCACATTCAGTAACTTCACTGAAGCTCAAGCTGAGTGTTTGGTTCAAAGGGCACCTGTGAGAGGATTTCAAGTGGAAAGAAAGTCTACATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCACAATTTCAACTTGGAGATGCTGA 2184 0.3947 MKDMPLPFEEFQVKGGVLDYFSSTSNSASDSFSLLLNQPQEQQNQQNWTLDKEDYCYVEPTSVLDSRRSPSPPISSSTMSSSHGSGSNNNNTSMVVVSENLAPNLSNEEGLENSGEKCGGMRMEDWEGQDQSLLRLIMGDVEDPSVGLNKILQNSGVGSQNVDFHGGFGVLEHQQGLNNNMEGSVQQGNYNVFPFMAENIDSHNAKSGPESMFGNYPMLTSSSTSGVFCSQQQQNQEFGVVDDKPQVINPNFMMNHNQVQFSENPSFFVPLPYPQVQEQQVFAQNQLKRPHFDMVGNNYSVPRLPLLDSGQEMFARRHQQQTQLPLFPHHHLQQHEQQSSVVPFAKQQKVSSTIAGDDASNQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFQRASFYVKEALQLMLHSNGNNLNVFSPISFIFKIGAYKSFSEISPVLQFANFTCNQVLIEALERFDRIHIVDFDIGFGVQWSSFMQELVLRGNGTPSLKITAVVSPSSCNEIELNFTQENLIQYAKDLNIPFEFSILNMEFLNSPSFPQPAHFFDSNEAIGVNLPVSSFISYPSSFPLALHFVKQLKPKVVVTLDKNCDRLDVPLPTNVVHVLQCYSSLLESLDAVNVNLDVLQKIERHFIQPNINKIILGHHHRSHEKLPPWRNMFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFQVERKSTSLVLCWQRKELITISTWRC 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00717 727 ProSiteProfiles GRAS family profile. 358 726 IPR005202 -
Tsu06g00717 727 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 10 726 - -
Tsu06g00717 727 MobiDBLite consensus disorder prediction 61 92 - -
Tsu06g00717 727 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 726 IPR005202 -
Tsu06g00717 727 MobiDBLite consensus disorder prediction 64 92 - -
Tsu06g00717 727 Pfam GRAS domain family 369 726 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00717 Tsu-Chr6 6252152 6255283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00717 367 727 GRAS Transcription Factor Family AT4G00150 54.270 2.57e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu06g00717 GRAS 1.1e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00717 - - gmx:100801785 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g00528 04 4905533 4908253 Tsu06g00717 06 6252152 6255283 PCT