Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00712 atgattgaaaaaatttcaaGGCATGCAACTTCTTCAAGTGTTACAAATTTGAGTGAGTTATTGATTTCACTCTCAAGTACTATAATATGTAGGATTGCTTTTGGAAAAAGCTATGAGAGTGATGGAGTTGAGAAAAGTAGGTTTCATGAAATGTTGCAAGAGTTTCAAGCTTTGTTGGCTGAATTCTTTGTTTCTGATTATATTCCATTTATGGGTTGGATTGATAAGCTTAGAGGATTGCATGGTCGTGTTGATAGAAATTTCAAGGAGTTTGATAAGTTTTATCAAGAGATTATTGATGAACATTTGGATCCAAATAGACAACAAATTGTAGATGAAGAGGATATTGTTGATGTCTTACTCCAATTGAAGAGAAatcattcattttcttttgatttcacTTTTGATCACATCAAAGCAGTCCTCGTGGATATGCTTGTAGCCGCAACAGATACCACATCAGCCGCGGCAGTTTGGACTATGACTACGCTAATAAAAAATCCAAGGGTAATGAGGAAAGTGCAAGAAGAAATTAGGAACACTGGAGTTAAAAAAGACTTTTTAGATGAAGATGatattcaaaattttctttatttgaagGCAGTAATTAAAGAGACGCTAAGATTGTACCTACCAGCCCCACTTCTTGTGCCAAGAGAATCAAGGGAAAAATGTATTATAAGTGGCTACGACATTGCAGCCAAGACAATAGTTTATGTGAATGCTTGGGCTATTCAGAGAGACCATAATATTTGGAAAAACCCAGAAGAATTTTATCCCGAGagatttttagaaagttctaTAAATTTTATTGGACAAGATTTTGAACTAATACCCTTTGGAGCTGGTCCAAGAATTTGCCCGGGCATGCCTATGGCAGTTGCATCATTGGAACTTATGCTTGCAAATCTTCTctattattttgattggaaatTGCCACATGGATTAGTAAATGAAGATATTGATACAGAAATGCTGCCTGGGATCACTCAACACAAGAAGAACCATCTTTGTCTTGTTGCAAATATCCATACATAG 1038 0.3333 MIEKISRHATSSSVTNLSELLISLSSTIICRIAFGKSYESDGVEKSRFHEMLQEFQALLAEFFVSDYIPFMGWIDKLRGLHGRVDRNFKEFDKFYQEIIDEHLDPNRQQIVDEEDIVDVLLQLKRNHSFSFDFTFDHIKAVLVDMLVAATDTTSAAAVWTMTTLIKNPRVMRKVQEEIRNTGVKKDFLDEDDIQNFLYLKAVIKETLRLYLPAPLLVPRESREKCIISGYDIAAKTIVYVNAWAIQRDHNIWKNPEEFYPERFLESSINFIGQDFELIPFGAGPRICPGMPMAVASLELMLANLLYYFDWKLPHGLVNEDIDTEMLPGITQHKKNHLCLVANIHT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00712 345 Gene3D Cytochrome P450 1 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS P450 superfamily signature 278 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS P450 superfamily signature 148 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS P450 superfamily signature 201 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 Pfam Cytochrome P450 1 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 287 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 137 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 241 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 277 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 157 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PANTHER CYTOCHROME P450 71B11-RELATED 1 343 - -
Tsu06g00712 345 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 280 289 IPR017972 GO:0005506|GO:0016705
Tsu06g00712 345 SUPERFAMILY Cytochrome P450 2 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00712 345 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00712 Tsu-Chr6 6208800 6210200 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00712 1 344 Cytochrome P450 AT4G31500 47.262 9.91e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00712 - - mtr:MTR_4g026030 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00712 06 6208800 6210200 Tsu06g00712 06 6208800 6210200 ECH