Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00709 atgtcCTCTTCATCATCAACTTCCTTTTCACCGGACcagcaacaacagcaacaactcTCTCCTTCCGACCAGCTCTGTTATGTTCATTGCAATTTTTGTGACACTGTTCTCGCGgtgAGTGTTCCGTCCTCAAGTTTGTTCAAGACTGTGACAGTGAGATGTGGTCATTGCACTAATCTTCTCTCAGTTAACATGCGTGCTTTGCTCCTTCCTGCTCCTAATCAGCTTCACCTTGGACACAACTTCTTCAATCCTCAAAATTTTATGGAGGAGATTAGAAATGCGCCTTCGACAAACATGATGATGAATCAACTTCCAAATCCAAATGATTTGATGATGAGTGCCATGAGAGGAGGGCATCATGAAGAAATCCCTAAACCTCCAGCTGCAAACAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATACAACGTATCAAAGCTGGGAATCCTGATATAAGCCATAGAGAGGCTTTTAGTGCAGCTGCAAAGAATtGGGCCCATTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGACTCAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACAAGCAAATGTAGGGTCGGCTCCTCTTTGTGACATTTTTCCGCGATTGTTTAAAGTATCTCTTCAATTGGAACTTACAATTAAAGAAATGGGTGTGGCTTGTGGGGAAGTTAGTGAATCGGAAAATCATTTGTTAGAGACGTGTCCTTCAGCTTGGGTGGATTGGCAATGGTCCATAAGTGATTTGGTGTTACTATGTTTGAGGATTGCATTTGGGAGGAGGTATGAAGATGAAGGAGTAGAGAGAAGTAAATTCCAAGGAATGTTGCATGAGTTGGAGGCAATGCTAACATCTTTCTTTGTTTGTGATTATATTCCATTCATGGGTTGGATCGATAAACTATCTGGACTTCGTTCGCGCCTCGAACGAAGTTTCAAGGAGATGGATGAGTTTTACGAAGAAGTTATTGATGAACATTTGGATCCAAATAGACAAAATACAGATGAAGAAGACATTGTTGATGTCTTACTCCAATTGAAGAAACAACATTTGTTTTCATTTGATCTCACTTTTGATCACATCAAAGGAGTTCTCATGGATATGCTTGTAGCCGCAACTGATACCACGTCAGCCACATCAGTTTGGGCTATGACCACCCTGATAAAAAATCCAAGAGTAATGAGGAAAGTACAAGAAGAAATTTGGAACACTGGAGTTAAAAAAGGCTTTTTAGGTGAAGATGATATTCAAAATTTCCCTTATTTGAAGGCAGTAATTAAAGAGACACTAAGATTGTACCTACCTGCCCCACTTCTTGTGCCAAGAGAATCAAGGGAAAAATGTATTATAAGTGGCTATGACATTCCAGCCAAGACAATAGTTTATGTGAATGCTTGGGCTATTCAAAGAGACCGTAATGTTTGGAAAAATTCAGAAGAATTTTATCCTGAAagatttttagaaagttctaTAAATTTTATTGGGCAAGATTTTGAACTAATACCCTTTGGAGCTGGTCGTAGAATTTGCCCTGGCATGTCTATGGCAGTTGCATCATTGGAACTTATCCTTGCAAATCTTCTCAATTCTTTTGATTGGAAATTACCACATGGATCAGTAAAAGAAGATATTGATACAGAAATGCTACCTGGGATCACTCAACACAAGAAGAATCCTCTTTGTCTTGTTGCAAATATCCATATATAG 1782 0.3889 MSSSSSTSFSPDQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHNFFNPQNFMEEIRNAPSTNMMMNQLPNPNDLMMSAMRGGHHEEIPKPPAANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDVLMKDGFFTQANVGSAPLCDIFPRLFKVSLQLELTIKEMGVACGEVSESENHLLETCPSAWVDWQWSISDLVLLCLRIAFGRRYEDEGVERSKFQGMLHELEAMLTSFFVCDYIPFMGWIDKLSGLRSRLERSFKEMDEFYEEVIDEHLDPNRQNTDEEDIVDVLLQLKKQHLFSFDLTFDHIKGVLMDMLVAATDTTSATSVWAMTTLIKNPRVMRKVQEEIWNTGVKKGFLGEDDIQNFPYLKAVIKETLRLYLPAPLLVPRESREKCIISGYDIPAKTIVYVNAWAIQRDRNVWKNSEEFYPERFLESSINFIGQDFELIPFGAGRRICPGMSMAVASLELILANLLNSFDWKLPHGSVKEDIDTEMLPGITQHKKNPLCLVANIHI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00709 593 SUPERFAMILY Cytochrome P450 278 588 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 MobiDBLite consensus disorder prediction 119 139 - -
Tsu06g00709 593 Gene3D Cytochrome P450 241 590 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 Pfam Cytochrome P450 278 583 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 Gene3D High mobility group box domain 125 181 IPR036910 -
Tsu06g00709 593 Pfam YABBY protein 21 185 IPR006780 GO:0007275
Tsu06g00709 593 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 528 537 IPR017972 GO:0005506|GO:0016705
Tsu06g00709 593 MobiDBLite consensus disorder prediction 119 133 - -
Tsu06g00709 593 PRINTS E-class P450 group I signature 535 558 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 489 513 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 273 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 405 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 448 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 385 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS E-class P450 group I signature 525 535 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS P450 superfamily signature 526 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS P450 superfamily signature 396 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 PRINTS P450 superfamily signature 535 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00709 593 SUPERFAMILY HMG-box 130 178 IPR036910 -
Tsu06g00709 593 PANTHER CYTOCHROME P450 71B11-RELATED 277 591 - -
Tsu06g00709 593 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 277 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00709 Tsu-Chr6 6142857 6199304 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00709 280 593 Cytochrome P450 AT4G31500 47.003 2.11e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Tsu06g00709 p450 1.6e-76 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00709 - - mtr:MTR_4g026030 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00709 06 6142857 6199304 Tsu06g00709 06 6142857 6199304 ECH