Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00707 ATGAAATTGAAGCTAGGCAAGAGGGTAACTCGGGTCACTCGATGGATTTTCCGAAGATTTCGGACCCGATCCAAATACCATCGTCTCGGTGGTTCACCGGAGAAGACTCACCTGAAGAAGCTTCTAACATGGGGTCGGAAGTTAACTACAAAAGCAAAGTCTCTATGCACCAAAAAAGGCTCGGTTGGGTCGGGTTATTCACCGGTTAGAACTGACCCGGTTAATGAAAACCGTCCACCGGTTCCGAAGGGTCATTTAGCGGTTTACGTGGGTCAAAAAGATGGTGAGTTTCGTCGGGTTTTGGTGCCGGTGGTTTATTTCAACCACCCTTTATTCAGTGAATTGTTGAAAGAAACTGAGAAGGAATATGGGTTTTGTCATCAAGGTGGAATCACGATTCCTTGTCGGGTTACGGAGTTTGAACAGGTTAAGACCCGGATTGCCTCTGGGTCGGGTTTAATGAAGTTGGGTCGGCGGAGGTATTTATAA 489 0.4683 MKLKLGKRVTRVTRWIFRRFRTRSKYHRLGGSPEKTHLKKLLTWGRKLTTKAKSLCTKKGSVGSGYSPVRTDPVNENRPPVPKGHLAVYVGQKDGEFRRVLVPVVYFNHPLFSELLKETEKEYGFCHQGGITIPCRVTEFEQVKTRIASGSGLMKLGRRRYL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00707 162 PANTHER SMALL AUXIN-UP RNA-RELATED 3 157 - -
Tsu06g00707 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 157 IPR003676 GO:0009733
Tsu06g00707 162 Pfam Auxin responsive protein 64 144 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00707 Tsu-Chr6 6106959 6108136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00707 76 140 Calmodulin-binding Proteins AT3G43120 52.308 4.74e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00707 K14488 - gmx:100808164 199.904