Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00702 ATGGCACAAAAACTCATTCTCCCATCACTAGTCATTTTCCTATCACTCTTCTTAGAGTCCTCCCTAGCCAAACATAACTCTCAAACAATAACCTACATAGAATCCTCTTGCAATGGTACCCTCTACCCTAAACTTTGCATTCGTTGTCTTAACAAATATTCCAATTCCATCATAAATGGACCTCAACACTTAGCTCAAGTTGCCTTATCCGTGAGCCTATCTAGAGCCCTACAAACAAGAGGGTACCTTTTGAATGTTGCTAAAGAACTCAACGCAATTgatcataaaaacaaaaggatGTATCTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTTGACCAACTTAGCCAAGCCATCAAAGAATTAAAAAGGTTGAATAACTTTAACACCGTCATCAATGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTGAGCACGGCATTAACCGATgcgagtagttgtgtacaatcGTTTCCCGGTCATAGGATGAGCAAAAGGGTTGCGACGATTAAGATTAAGGCGAAGAATGTTGCGGAAGTTACTAGTAATGCACTTGCTTTGTTTCATAGTTATGCTTCTAGCTACAAGCAAGCAGCAGCTATCAAGAAGccttga 633 0.3681 MAQKLILPSLVIFLSLFLESSLAKHNSQTITYIESSCNGTLYPKLCIRCLNKYSNSIINGPQHLAQVALSVSLSRALQTRGYLLNVAKELNAIDHKNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNNFNTVINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKIKAKNVAEVTSNALALFHSYASSYKQAAAIKKP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00702 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Tsu06g00702 210 SMART PMEI_2 28 193 IPR006501 GO:0004857
Tsu06g00702 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 197 IPR006501 GO:0004857
Tsu06g00702 210 PANTHER BNAANNG18590D PROTEIN 4 201 - -
Tsu06g00702 210 Coils Coil 108 128 - -
Tsu06g00702 210 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Tsu06g00702 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
Tsu06g00702 210 CDD PMEI-like_3 35 199 - -
Tsu06g00702 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00702 Tsu-Chr6 6043677 6044309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00702 3 194 Carbohydrate Esterase AT3G49220 24.883 2.39e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00702 - - mtr:MTR_4g025590 324.709