Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00701 ATGGGAACTTATGCCACCGTTTTGTTCCTCTTTTTTGCCATGTCCATAACCAAATCCTTTTGCCTCCAAGAAATGGAGGTACTCAAAATGGctcaaaaacaattttcacaAGCCATTAATTGGGTTGATAACTCTATGAAATTGCATGGCTTAGAAAGCATGACAATctcaacaaatcaaacaataagTAGCTTGGCTCTAAGAGATTGTGCTAAACTCTATGAGGAGAGTGAGTTTAGGCTTAATCAAATGATGTTTGAAAAGAGTTCTTACTCTAAAGAAGATGCTCTTATATGGATAAGTGCATTGATGACAAACCATAGGACTTGTTTGGATGGATTAAATGAAAAAGGATATTTTCAAGGTGATCAAATTTTGGGTAGAAACTTGACAAAGTTGCTTGGCCAAACACTTGCTTTTTATTCAAACAACAAAGTAAAAGGAAAAGaACAACCTCAAAGAAACACAATATTAGAAGAAAATGATGGAGTATTAGAATCATGGAGTCTAGCAAGCAATAAAGCAGATTTCACAGTAGCACAAGATGGTTCAGGAACTCATAGAACAATCAAAGAAGCAGTGGATGCACTTGCATCAATGGGACATAATCGTCCTTCAAGAGCAATTATACATGTAAAAGCAGGAGTGTACCATGAAAAGATTGAGATTGGAAGCAAGTTGCATAATGTTATGTTTGTTGGAGATGGCATTGATAAAACTATTGTCACTGGAAATAGGAATGTTGTTCGTGGTTCTACCACTCTTGACTCTGCCACATTTGATGTATCAGGGGATGGATTTTGGGCAAGAGACATGACATTTGAGAACACAGCAGGACCAGAAAATCACCAAGCAGTAGCACTAAAAGTAAGTTCAGACTTATCAGTCTTCTACAGATGCAGCTTCAAAGCCTACCAAGACACACTTTACGTCCACTCGAATCGACAATTCTACCGCGACTGCCACATCTACGGAACAATCGATTTCATATTCGGCGACGCAGCCGTAGTCTTACAAAACTGCGACATTTTCATTCGAAAACCAATGAGTCATCAATCAAATTTCATCACGGCACAAGGTCGAGACGATCCAAATAAACCAACCGGAATTTCGATACAAAATTGTAGGGTTAGGCCTGATTCTGAATTTTCTATGGTAAAGGATAATTTCAAGAGTTTTTTAGGTAGGCCTTGGAAAAAATATTCAAGAactgtttttataaaaagtgacTTAGATGGATTAATTCATCCTAAAGGTTGGGGTGAATGGGAGGGTAATTTTGCACTTTCAACTTTATATTATGGTGAATATATGAATTATGGAAATGGTGCATCTACACAAAATAGGGTTAATTGGCCTGGTTTTCATGTGTTGAATAGTGCTAATGAGGCTTCACAATTTACAGTTAGTAGATTTTTGCAAGGTGGATATTGGATTTCAGCTTCAGGGATTCCATTTTGGGCTGGAATTTAA 1473 0.3612 MGTYATVLFLFFAMSITKSFCLQEMEVLKMAQKQFSQAINWVDNSMKLHGLESMTISTNQTISSLALRDCAKLYEESEFRLNQMMFEKSSYSKEDALIWISALMTNHRTCLDGLNEKGYFQGDQILGRNLTKLLGQTLAFYSNNKVKGKEQPQRNTILEENDGVLESWSLASNKADFTVAQDGSGTHRTIKEAVDALASMGHNRPSRAIIHVKAGVYHEKIEIGSKLHNVMFVGDGIDKTIVTGNRNVVRGSTTLDSATFDVSGDGFWARDMTFENTAGPENHQAVALKVSSDLSVFYRCSFKAYQDTLYVHSNRQFYRDCHIYGTIDFIFGDAAVVLQNCDIFIRKPMSHQSNFITAQGRDDPNKPTGISIQNCRVRPDSEFSMVKDNFKSFLGRPWKKYSRTVFIKSDLDGLIHPKGWGEWEGNFALSTLYYGEYMNYGNGASTQNRVNWPGFHVLNSANEASQFTVSRFLQGGYWISASGIPFWAGI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00701 490 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 120 IPR035513 -
Tsu06g00701 490 SUPERFAMILY Pectin lyase-like 174 489 IPR011050 -
Tsu06g00701 490 Gene3D - 170 490 IPR012334 -
Tsu06g00701 490 SMART PMEI_2 12 140 IPR006501 GO:0004857
Tsu06g00701 490 Pfam Pectinesterase 176 475 IPR000070 GO:0030599|GO:0042545
Tsu06g00701 490 CDD PMEI-like_4 6 142 - -
Tsu06g00701 490 Pfam Plant invertase/pectin methylesterase inhibitor 29 122 IPR006501 GO:0004857
Tsu06g00701 490 ProSitePatterns Pectinesterase signature 2. 323 332 IPR033131 -
Tsu06g00701 490 PANTHER PECTINESTERASE 7 489 - -
Tsu06g00701 490 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 143 IPR035513 -
Tsu06g00701 490 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 7 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00701 Tsu-Chr6 6035660 6040045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00701 6 490 Carbohydrate Esterase AT3G60730 53.113 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00701 K01051 - gmx:100792852 749.969