Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00696 ATGGCACAAAAACTCATTCTCCCATCACTAGTCATTTTCCTATCACTCTTCTTAGAGTCCTCCCTAGCCAAACATAACTCTCAAACACTAACCTACATAGAATCCTCTTGCAATGGTACCCTCTACCCTAAACTTTGCATTCGTTGTCTTAACAAATATTCCAATTCCATCATAAATGGACCTCAACACTTAGCTCAAGTTGCCTTATCCGTGAGCCTATCTAGAGCCCTACAAACAAGAGGGTACCTTTTGAATGTTGCTAAAGAACTCAAAGCAATTgatcataaaaacaaaaggatGTATCTAACCGTGCAAGATTGTGTGAATCAAATCAATGATAGTGTTGACCAACTTAGCCAAGCCATCAAAGAATTAAAAAGGTTGAATAACTTTAACACTATCATCAATGATAAAGTGTTGTGGCATATAAGTAATGTTGAGACATGGGTTAGCACCGCCTTAACCGATgcgagtagttgtgtacaatcGTTTCCCGGTCATAGGATGAGCAAAAGGCTTGCAACGATTAAGGTTAAGGCGAAGAATGTTGCGGAAGTTACTAGTAATGCACTTGCTTTGTTTCATAGTTATGCTTCTAGTTATAAGCAAGCAGCAGCTAGAACTACCAAGAAGCcttga 639 0.3646 MAQKLILPSLVIFLSLFLESSLAKHNSQTLTYIESSCNGTLYPKLCIRCLNKYSNSIINGPQHLAQVALSVSLSRALQTRGYLLNVAKELKAIDHKNKRMYLTVQDCVNQINDSVDQLSQAIKELKRLNNFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRLATIKVKAKNVAEVTSNALALFHSYASSYKQAAARTTKKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00696 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 197 IPR006501 GO:0004857
Tsu06g00696 212 Coils Coil 108 128 - -
Tsu06g00696 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 197 IPR035513 -
Tsu06g00696 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Tsu06g00696 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Tsu06g00696 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Tsu06g00696 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
Tsu06g00696 212 CDD PMEI-like_3 35 199 - -
Tsu06g00696 212 PANTHER BNAANNG18590D PROTEIN 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00696 Tsu-Chr6 6008852 6009490 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00696 3 194 Carbohydrate Esterase AT3G49220 24.883 3.34e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00696 - - mtr:MTR_4g025590 334.339