Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00639 ATGTCTTATGGCCACTACGATGTGTATTTGACTTACAATGGCAAACACGCCTGTAAATCTTTTGCGTTGGATCTCGATTCTGCTCTCAGACAGGCTGGACTCAATGTTTACCTCAATCATGACAATCTTATGGCCAGAGGAGATTACACAGTCACAGACACAAACTTCTCAGAAATCGAAGGTTCTAGAACTTGTATCATCATTTTCTCAATTAACTTTGATGCTTCAACAGGGTTTCTACAAGAGTTGGAGAAGATATTGGAGCGTCGTAAAACCAGAGGGCTCACGGTTGTGCCTGTTTTTTATGACGTAGATCGCTCTGAATTACGTCATCAGGAAGGAGTGTTTGCACGAAAAAGTTGGTTCAGTGAAGACAAGGCAATGCGTTATAGAGCCGCACTTATTGAAGTTGCCAACATCATGCCAGGATTTCGTGTGTGGGATTCTATGTGGGATTTCAGGAACAGAAGTAAAGGTATTAATGACATGGTGCAACagctcatcaaaacaaaaaatgacatAGTGCAACATTTGGCTAGTTTGATAGAAGACAAATTCTCTTCACCTGTTGTTAAACACCTAGTGGGAGTAGAAGCTCGGATGCAAGATGTTATTCAACTATTGAACAAGGAACAACAAAAAAGTACCATAATTGTAGGGATATGGGGAATAAACGGGGTTGGTAAAGGAACAATTGCAAAAGCCACTTATAATCAAATGGGTTGCAGTTTTGAGGGGCAGAGCTTCCTCCCAAATATTAATGAAACTTGTGAAAGTAAAAAAGGTTTAATTTCATTACAGAGACAACTTCTTTCAGACATCTACAAAAGAACAAAGATACAGATAAATGCAGTTGAATCAGGGAAAATTGTATTACGTGAAAGACTTAGCTGTAAGAAGATATTTCTTGTACTTCACAATGTGAATAAATTGGAACATTTGAATGCTTTGTGTGGTAGTCATGAATGGTTTGGTCTCGGAAGTAAAATAATCATCACAACAAGTGATAGACGTTTACTTCGTAGCCCTCAAGTTGACCATATATATAGAATGAAATATATGGACATTAATGAATCTCTTGAGCTTTTTAGTTGGCACGCATTTAAAACTCCAAGTCCTATAGAAAGTTACGCTGGCCTTTGTAGAGATGTTGTTGAGTACTGTGGGGGATTGCCTCTAGCTCTTGAAGTCATTGGGTCTTTTTTGTTTGATAGATCTGTATTGGAGTCCAAGTTTTTACTGGAGAAACTCAAAACCATTCCCAACGATATGATAATGAAAAATCTCAGAACAAATTTTGATGATTTAGATattaatgagaaaaatatattCCTTGATGTGGCTACTTTATTTATTGGGATGGACAAAGATGATGTAGTTCAGACATTAAATTCCTCCGTGGATTTCCCGGAAAATGGAATAACAATCCTTGAAGAGAAGAGCCTTGTAACTATAGATAGCAAGAACAGGATTGGAATGCATACTTTGCTACAAGCAATGGGAAGAGAAATCCTAAGGCAAGAGTCGTCGTATATTGTTGAGAAAAAGACAGAGACGTACGATGTGTTCTTGAGCTTCAGAGGGGAAGACAGTCGCGTCAAATTCATTTCACATCTTGATTCCTCTCTTCAAAATGCTGGAATTTATGTTTTCAAAGACGACGATGGGATTAAACGAGGAGATCAGATCTCAGTATCATTATTGCAAGCAATTGGTCAGTCTAGAATTTGTATTGTTGTTCTGTCTACAAATTATGGTAATTCAAAATGGTGTATGATGGAGTTGGAAAGAATTGTGGAAATCAGTAGAACAGAGGGTATGGTGGTTGTGCCGGTGTTCTATGAGGTAGATCCTTCGGAAGTACGCAATCAGACAGGAGAGTTTGGAAAAGCTTTCGATTCTCTTATATCAAAAAAAGAAGTGGATAAATCTACAGATGTTCCAAAAGAAGTGGATGAATGTACAGATGTTCCAAAAGAAGTGGATGAAAACAGAAAGAGGAATTGGAAAACAGCACTCCATGAAGTTGGTAGCAGAGCAGGGGTTGTCATCATAAATCCCAaGAATGAAAGCGAGGATATCAAGAAAATAGTTGAACTTGTTACTCGTTTGCTAGACAAGACAGAATTGTTTGTTGCTGACTATCCGGTGGGAGTAGAATCACGCGTACAAGATGTTATTCAACTATTGAACAGCCAAAAATCAAAAGATCCTCTACTACTAGGGATATGGGGTATGGGAGGGATCGGGAAAACAACCCTTGCTAAAGCCGTATACAATAAGATTCGTCATGATTTTGATGGGAAGAGCTTCCTGTTCAATGTCAGGGAAGTTTGGAAACTAGATAATGACAAAGTTTCATTGCAGCAACGACTTCTTTCTGACATCTACAAAACTACACGAATAAAGATAAACACAGTTGAATCAGGAAAAAAGATATTAATGGAAAGACTTTGTGTAAAAAAGATATTTCTTGTAATTGATGATGTGAATAAACTTGATCAATTGAATGCTTTGTGCGGAAATCGAACATGGTTTGGTAAGGGAAGTAGAATAATCATCACAACAAGAGATGAGGATTTACTTAGTAGGCTTGAGGTTGACCATGTATACAGAATGCATGAAATGGATGACAGGGAATCTCTCGAACTTTTTAATTGGCATGCATTCAAACAACCAATTCCCGGTGAAGGTTTTACTAGCCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGACTGCCACTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTCACTAAGAGAAGGGAAGCAGAATGGAAAAGTGTACTGGAGAAACTCAAACTGATTCCTAATGAGGAAGTGTCAGAAAAGCTCAAAATAAGTTTTGATGGTTTAAGTGATGATGATATGAAAGATCTATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGACCGGGAAGATGTAAATGAGATATTAAAAGACTGTGGCCATTTTCCAGAAATTGGAATAAGTGTCCTCGTACGACAAAGCCTTGTTACTGTTGATAGGAAAAACAAGATCGGAATGCATGATTTGCTACGAGATATGGGAAGAGAGATCGTCCACAAGAAATCTAAAGAGAAGGGCAAGGAGCCTAGTAGATTATGGCGTTACAAGGATGTGCATGAGTTGTCAAAAGATGCTATTTCTCTATATGTCAAGGGATTGACTTTAAAGATGTCAACACTGGAGTCAACAACTTGTTTAGAAACCAAAGCATTTGAGAAGATGGACAGACTTAAATTGCTTCAATTTGCTGGCGTACAGCTTGATGGAGAATACAAGTATCTTTCAAAAGAACTCAGGTGGCTTTGTTGGCATGGATTCCCTTTAAAATTTACACCTGAGGACTTTCATCAAGGAAGCTTAGTTGCTCTTGACTTACAATATTCTAATCTAGAACAAGTGTGGAGGAAGGCTCAGTTGCTGGTGAAGCTGAAAATTCTTAATCTCAGTCATTCTCACAACTTGAGACATACCCCAAACTTTTCAAAGTTGCCAAATCTTGAAAAGTTAATACTTAAGGATTGTCCAAGCCTTTGCGAACTTCCAAGGAGCATCTATAAGTTAGACTCAGTCAAAACTCTCATTCTGTCTGGATGTACAAAAATTGACAAGCTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACCCTGGTTGCGGATAGCACTGCTATAACAAGAGTTCCCTTTGCAGTAGTGAGATCAAAAAGCATCGCGTATATTTCCCTCTGTGGCTATGAAGGATTTGCGCGTAAAGTGTTTCCTTCTATTATCCAGTCTTGGTTGTCGCCAACAAATAATGTTCTATCTCTAGTTCAAATATCTGCAGGAACTCCATGTCTTGATTTCACTGATGAACAAAATAAGAGTTTCTATTGTCTACCGTCCACTTTTGAAGACCTTCAGGATCTTCAACGTCTTTGGTTGAAATGCGATTCAGAAGCTCAACTAAATCAAATTGTGGCAAGTATTTTGTATAGCTTTAACACTCAAAATTCTGAGGGATTATCTAATATCGGGACTACAGCATCAATTCTTTGCCGCAGTCAAGTTGGTATTTCAAGCTCAAAAAATTCCTTGACATCACTTTTGATTCAAATGGGAATGAGCTGCAATGTCACTGACATTCTCACAGATAATATTTTGCAGAAAATTCCTCCCACTGGGTCTGGTTTACTCCCCGGTGACAACTCTCCCAATTGGCTAACCTTCAATAGCAACGACTCTTCTGTAACTTTTGAAGTACCTGAAGTAGATGGGCGTAATTTGAAGACAATCATGTGCATTGTCTATTCTTCTTCTGCAGATAATGCAACTACAGAAGGTTTTAAAGTTGTGTTGGTAATAAATTACACAAAGAACACCATTCAGGTCTACAAGAGAGATGGATTGCTAGCCACCTCTGATGAGGAGGAGTGGCAGAGAGTAATATCAAATATAGAACCTGGAAACAAAATTAAGGTGATTGTTGGTTTTACAAATGAATTCATTGTGAAGAAGACAACAATTTATCTTGTATATGATGATCAACCAATTGACGTAAAGATGAAGCACTGCCAGGAGCCAGATAAGAATGGCATTGTTTCTAGTGTTGATGAAAATcGTGTACTTGAGCGAAGTGTTGAAGAAACCCATCTTTCATCTGAAACAACTGTATCTGTGGGTCAGCAAATCAGCCAAGTCCAACCTTTGCGAACTTCTGACCTCCCCGAAGTAGTCACATCTTTTGGTAGCTGTGTTTCTGGGTCTGTTAAATCTCAAACTAGGCCTAAATATGATCCTTCTTTACCAAAGGAAACTTCTCCAATCTTATCTTACACTGACCCACCACAAGAAAAGGAAGGAGAGAATCAATCTGAGAGTAGAGGTTATTCACCTCATCATTTGGAAAATGATGAAGACAACCAAGATATTACTGACAGTGAATCATCTCATGCTTCATCTTCTCCTAAGGAAACTATGAATGAAACAGAATTTCCTAGTGCGATACAAGATGATCATGAAGTCCCTATTACTGGTATTCAAATTTCGAATGTTGCGATTCCTCCCAATATTCCTATTGATGATGAGCTTCAAACTGGATTAGCAGCTTTCAACATTGACTTGGAAAACAATGCTACTGCTGCGATAGAGAGTTTCCTATCATCACTTGGTTATTCGAGTGACCCAATAGTTTCAACTTCACAATGTGGTGCCTCATCTCAACTAACCACTACTGTTGAGTCTCTGGTTCAAGAACTTCGAAGTTTAGCTTTTGATGGACCTCCATTTGATAGCCTCTCTTCGATACTGGCTTTGGATCAGTCTCTTGACTCATTCAAGCAAAAACTTAGAATTCATCAACACCTTCTGCCTGCTTCACAACTTGAAGGCTTTACCACAGTCTTGACTAATCTTGAAGATATTGTAAATACTTATCGTGGTTATGAGCAAGAGAGGACACTCAAAGAACATTCTGAATCTGAAGTTGCAAAGTTCGCAATTGCTATGAATGAATCCAAAAACAAGTTTAATAAGTATCAAAGTCTTATAAGTGACTGTGAGAATCGTGACAAAGAGATTATTACAAAAGTTGAGGCATTGAAGAGAGAAATCAAAGGGTTGGAGATGGAGCAGGGAAATTTGAATGTTAAAAAAGAATCTGCTATAGAAAAGATGAATTCTGAAAAGAGAGTCTTACATTCACAAGCGGCCAGTCTAACTGCCCATCAATCTCAACTTCGAGCCTCACGAGACAAGCTTTCTACTCTAGATAATAACCTTCAGCAATGCAAAGCTACTTATGCTAGGTTTAAGGAGCATCCTCCGTTTTAG 5844 0.3802 MSYGHYDVYLTYNGKHACKSFALDLDSALRQAGLNVYLNHDNLMARGDYTVTDTNFSEIEGSRTCIIIFSINFDASTGFLQELEKILERRKTRGLTVVPVFYDVDRSELRHQEGVFARKSWFSEDKAMRYRAALIEVANIMPGFRVWDSMWDFRNRSKGINDMVQQLIKTKNDIVQHLASLIEDKFSSPVVKHLVGVEARMQDVIQLLNKEQQKSTIIVGIWGINGVGKGTIAKATYNQMGCSFEGQSFLPNINETCESKKGLISLQRQLLSDIYKRTKIQINAVESGKIVLRERLSCKKIFLVLHNVNKLEHLNALCGSHEWFGLGSKIIITTSDRRLLRSPQVDHIYRMKYMDINESLELFSWHAFKTPSPIESYAGLCRDVVEYCGGLPLALEVIGSFLFDRSVLESKFLLEKLKTIPNDMIMKNLRTNFDDLDINEKNIFLDVATLFIGMDKDDVVQTLNSSVDFPENGITILEEKSLVTIDSKNRIGMHTLLQAMGREILRQESSYIVEKKTETYDVFLSFRGEDSRVKFISHLDSSLQNAGIYVFKDDDGIKRGDQISVSLLQAIGQSRICIVVLSTNYGNSKWCMMELERIVEISRTEGMVVVPVFYEVDPSEVRNQTGEFGKAFDSLISKKEVDKSTDVPKEVDECTDVPKEVDENRKRNWKTALHEVGSRAGVVIINPKNESEDIKKIVELVTRLLDKTELFVADYPVGVESRVQDVIQLLNSQKSKDPLLLGIWGMGGIGKTTLAKAVYNKIRHDFDGKSFLFNVREVWKLDNDKVSLQQRLLSDIYKTTRIKINTVESGKKILMERLCVKKIFLVIDDVNKLDQLNALCGNRTWFGKGSRIIITTRDEDLLSRLEVDHVYRMHEMDDRESLELFNWHAFKQPIPGEGFTSLSRDVVKYSGGLPLALQVIGSFLFTKRREAEWKSVLEKLKLIPNEEVSEKLKISFDGLSDDDMKDLFLDIAFFFIGMDREDVNEILKDCGHFPEIGISVLVRQSLVTVDRKNKIGMHDLLRDMGREIVHKKSKEKGKEPSRLWRYKDVHELSKDAISLYVKGLTLKMSTLESTTCLETKAFEKMDRLKLLQFAGVQLDGEYKYLSKELRWLCWHGFPLKFTPEDFHQGSLVALDLQYSNLEQVWRKAQLLVKLKILNLSHSHNLRHTPNFSKLPNLEKLILKDCPSLCELPRSIYKLDSVKTLILSGCTKIDKLEEDIEQMKSLTTLVADSTAITRVPFAVVRSKSIAYISLCGYEGFARKVFPSIIQSWLSPTNNVLSLVQISAGTPCLDFTDEQNKSFYCLPSTFEDLQDLQRLWLKCDSEAQLNQIVASILYSFNTQNSEGLSNIGTTASILCRSQVGISSSKNSLTSLLIQMGMSCNVTDILTDNILQKIPPTGSGLLPGDNSPNWLTFNSNDSSVTFEVPEVDGRNLKTIMCIVYSSSADNATTEGFKVVLVINYTKNTIQVYKRDGLLATSDEEEWQRVISNIEPGNKIKVIVGFTNEFIVKKTTIYLVYDDQPIDVKMKHCQEPDKNGIVSSVDENRVLERSVEETHLSSETTVSVGQQISQVQPLRTSDLPEVVTSFGSCVSGSVKSQTRPKYDPSLPKETSPILSYTDPPQEKEGENQSESRGYSPHHLENDEDNQDITDSESSHASSSPKETMNETEFPSAIQDDHEVPITGIQISNVAIPPNIPIDDELQTGLAAFNIDLENNATAAIESFLSSLGYSSDPIVSTSQCGASSQLTTTVESLVQELRSLAFDGPPFDSLSSILALDQSLDSFKQKLRIHQHLLPASQLEGFTTVLTNLEDIVNTYRGYEQERTLKEHSESEVAKFAIAMNESKNKFNKYQSLISDCENRDKEIITKVEALKREIKGLEMEQGNLNVKKESAIEKMNSEKRVLHSQAASLTAHQSQLRASRDKLSTLDNNLQQCKATYARFKEHPPF 1947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00639 1947 Coils Coil 1840 1888 - -
Tsu06g00639 1947 Pfam TIR domain 6 175 IPR000157 GO:0007165
Tsu06g00639 1947 Pfam TIR domain 520 642 IPR000157 GO:0007165
Tsu06g00639 1947 ProSiteProfiles TIR domain profile. 518 705 IPR000157 GO:0007165
Tsu06g00639 1947 SUPERFAMILY L domain-like 1073 1397 - -
Tsu06g00639 1947 Gene3D Ribonuclease Inhibitor 1050 1257 IPR032675 -
Tsu06g00639 1947 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 17 515 - -
Tsu06g00639 1947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 528 1517 IPR044974 GO:0006952
Tsu06g00639 1947 MobiDBLite consensus disorder prediction 1591 1617 - -
Tsu06g00639 1947 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 528 1517 - -
Tsu06g00639 1947 MobiDBLite consensus disorder prediction 1591 1669 - -
Tsu06g00639 1947 SUPERFAMILY "Winged helix" DNA-binding domain 947 1052 IPR036390 -
Tsu06g00639 1947 Gene3D - 354 437 IPR042197 -
Tsu06g00639 1947 Gene3D - 875 960 IPR042197 -
Tsu06g00639 1947 Gene3D - 513 703 IPR035897 -
Tsu06g00639 1947 MobiDBLite consensus disorder prediction 1651 1669 - -
Tsu06g00639 1947 CDD AAA 717 866 - -
Tsu06g00639 1947 PRINTS Disease resistance protein signature 740 755 - -
Tsu06g00639 1947 PRINTS Disease resistance protein signature 910 924 - -
Tsu06g00639 1947 PRINTS Disease resistance protein signature 1149 1165 - -
Tsu06g00639 1947 PRINTS Disease resistance protein signature 817 831 - -
Tsu06g00639 1947 ProSiteProfiles TIR domain profile. 4 171 IPR000157 GO:0007165
Tsu06g00639 1947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 446 IPR027417 -
Tsu06g00639 1947 SUPERFAMILY Toll/Interleukin receptor TIR domain 518 635 IPR035897 -
Tsu06g00639 1947 Coils Coil 1917 1937 - -
Tsu06g00639 1947 Gene3D - 704 870 IPR027417 -
Tsu06g00639 1947 Gene3D - 178 348 IPR027417 -
Tsu06g00639 1947 Gene3D - 3 176 IPR035897 -
Tsu06g00639 1947 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 137 IPR035897 -
Tsu06g00639 1947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 515 IPR044974 GO:0006952
Tsu06g00639 1947 SMART till_3 5 140 IPR000157 GO:0007165
Tsu06g00639 1947 SMART till_3 519 679 IPR000157 GO:0007165
Tsu06g00639 1947 SUPERFAMILY "Winged helix" DNA-binding domain 425 510 IPR036390 -
Tsu06g00639 1947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 703 971 IPR027417 -
Tsu06g00639 1947 MobiDBLite consensus disorder prediction 1623 1650 - -
Tsu06g00639 1947 Pfam NB-ARC domain 720 943 IPR002182 GO:0043531
Tsu06g00639 1947 Pfam NB-ARC domain 198 410 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00639 Tsu-Chr6 5573346 5587323 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00639 195 509 WRKY Transcription Factor Family AT5G45050 34.472 1.66e-45 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00639 - - mtr:MTR_7g088950 1746.87