Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00636 ATGGGTCGCCGTTTTCAAGGCAAGAGCTTCCTCTCAGATATTAATCAAATCTGGGAACAAAGTGATGGCCAAGTTTCTTTATTACAGGGAAAACTTCTTTCAGACATCTACAAAATAAAGATAGATAGAGTTCAATTAGAAGAAATGAGATTTCAAGTTGACCATGTATACAGAATGAAATATTTGGACACTGCTGAATCTCTTAAGCTTTTTAGTTGGCATGCATTCAGAATTCCGAGTCCTAAAGAAAGTTATGCTGACCTTTGTATAGATGCTGTTGAGTACTGTGGAGGATTGCCTCTAGCTCTTGAAGTCATTGGGTCTTTTTTGCTGGATAGATCTGTAGCGGAGTGCAAGAGTGTATTGGAGAAACTCAAAACCATTCCCAATGATATGATAATGAGAAATCTAAGACCAAATTTTGATGATTTAGATATtgatgagaaaaaaatattccTTGATGTAGCTACTTTATTTATTGGGATGGACAAAGATGATGTAATTCAGACATTAAATTACTCTGTGCGTTTCCCTGAAAATGGAATCACAATCCTTGAAGAGAAAAGCCTTGTAACTATAGATAGCAATAACAGGATTGGAATGCATACTTTGGTACGAGCAATGGGAAGCGAAATCATTAGGGAACAGTCGATAGGTATGCCTGAGacAAAAATGTACGATGTGTTCTTGAGTTTCAGAGGAGAAGACAGTCGCGCAAAATTCATTTCACATCTCGATTCCTCTCTTCAAAATGCTGGAATTTATGTTTTCAAAGATGATGATGGGATTCCACGAGGAGATCAGATCTCAGTCTCATTGTTGCAAGCAATCGGTCAGTCTAGAATTTCTATAGTTATTTTGTCGAAAAATTTTGCTAATTCAAAATGGTGTATGCTGGAGTTGGAGAGAATTGTGGAAATCAGAAGTACCAATGGTATGGTAGTTGTACCAGTGTTCTATGAGGTAGACCCCTCAGAAGTACGTCATCAGACAGGAGAGTTTGGAAAAGCTTTCGATTCTcttatatcaacaaaaaaagtgGATGAATATACAAAGAGGAATTGGAAAACAGCACTCCATGAAGTTGGTGGCAGAGCAGGGGTTGTCATCATAAATTCCAGGAACGAAAGCGAGGATATCAAGAAAATAGTTGAACTTGTTACTCGTTTGCTAGACAAGACAGAATTGTTTGTAGCTGATCATCCAGTGGGAGTAGAATCACGTGTACAAGAAGTTATTCAACTACTGAACAGCCAAAAATCAAAAGATCCTCTACTACTAGGGATATGGGGCATGGGAGGGATCGGAAAGACAACCATTGCTAAAGCCGTTTATAATAAAATTCGTCATGATTTTGAGGCAAAGAGTTTCCTATTGAATGTCCGGGAGGTTTGGAAACTAGATAATGACAAAGTTTCTTTACAGCAACGACTTCTTTCTGACATCTACAAAACTACAAAGATAAAGATAGATACAGTTGAATCaggaaaaattatattacaGGAAAAACTACGCAAGAAAAGGATATTTCTTGTAATGGATGATGTGAATAAATTAGATCAGTTAAATGCTTTGTGTGGAAATCGAAAATGGTTTGGCGAGGGAAGTAGAATAATCATCACAACAAGAGATGATGATTTGCTTAGTAGGCTTGAAGTTGACCATGTATACAGAATGAAGGAAATGGATGAGAATGAATCTTGTGAGCTGTTTAATTGGCATGCATTCAAACAACCAATTCCTGGTGAAGGTTTCACTAGCCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGACTGCCGCTAGCTCTTCAAGTCATTGGATCCTTTTTGTTGACTAAGAGAAGGCAAAGAGAGTGGAATAGTGTACTGGAGAAACGTAAACTGATTCCTAATGATGAAGTGTTGGAGAAGCTCAAAATAAGTTTTGATGGTTTAAGTGATGATGATATGAAAGATATATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGACCGGGAAGACGTAACTGAGATATTAAAAGACTGTGGGCATTTTTCAGAAATTGGAATAAGTGTCCTCTTACAACAAAGCCTTGTAACTGTTGATAGGAAAAACAAGATCGGAATGCATGATTTGCTACGAGACATGGGGAGAGAGATCGTCCGCAAGAAATCTAAAGAGGGGGGCAAGGAGCCAAGTAGATTATGGCGGTATGAGGATGTTCATGAGTTGTCAAAAGATGCTATTTCTCTATATGTTAAGGGACTGACTTTAAAGATGTCAAGACTGGAGTCAACAACATGTTTAGAAACCAAAGAATTTGAGAAGATGGACAGGCTTAAATTGCTTCAATTTTCTGGAGTACAACTTGATGGAGATTATAAAGTTCTTTCAAAAGAACTTAGGTGGCTTTGTTGGCATGGATTCCCTTTAAAATTTACACCTGAAGACTTTTATCAAGGAAGTTTAGTTGCTCTTGACTTAAAATATTCCAATCTAGAATTAGTATGGAGGAAGGCTCAGAAAATTCCTCCCACTGGGTCTGGTTTACTCCCCGGTGACAACTCTCCTAATTGGTTAACCTTCAATAGCAACGATTCTTCTGTAACTTTTGAAGTACCTGAAGTAGATGGGCGTAATTTGAAGACAATCATGTGCATTGTCTATTCTTCTTCTGCAGACAAAACAACAACAGAAGGTTTTCAAGTTGTGTTGGTAATAAATTACACAAAGAACACCATTCAGGTCTGCAAGAGAGATGGATTACAAGCCACCTATGATGAGAAGGAGTGGCAGAGGGTAATATCAAATATAGAACCTGGAAACCAAATTAAGGTGATTGTTGGTTTTACAAATGAATTCATTGTGAAGATGACAACAATTTATCTTGTATATGATGATCAACCATTTGATGTAAAGACGAAGCACTGCCAGGTGCCAGATAAGAATGGCATTGTTTCTAGTGTTGATGAAATTCATGTACTTGAGCAAATTGTTGAAGAAACCCATCTTTCATCTCAAAAAACTGTATCTGTGGGTCGGCAAATCAGCCAAGTCCAACCTTTGCAAACTTCTGGCCTCCCCGAAGTAGTCACATCTTTCGGTAGCTGTGTTCCTGGGTCTGTTAAACCTCAAATTAGGCCTAAATCTGATCCAACGATCAATGGCATAGAACTTCCACAGATCACAATTGAGGAACATCTTCCTCCTATGCCTCAACTGGAGAATACTGGTCCGATAATGATCAATGGCATAGAACTTCCACAGATCACAATTGAGGAACATCTTCCTCCTGAAGCTCGACTCAAATATCAATTTGAtcaattttcttcaagtatCAGTCAAACTTTGGATTCTTTGCGCGAACAAAATGAACAAATTGCTGCACATCAACAAAGGCTTGAGGAAAAGATTGATGTTCAGGCTCAGAAGTTGGACTCCTTGATGACTTTGCTTCAACAACTCGTGCCTAGGAATCCTTATACACTGCCTTTATAA 3480 0.3744 MGRRFQGKSFLSDINQIWEQSDGQVSLLQGKLLSDIYKIKIDRVQLEEMRFQVDHVYRMKYLDTAESLKLFSWHAFRIPSPKESYADLCIDAVEYCGGLPLALEVIGSFLLDRSVAECKSVLEKLKTIPNDMIMRNLRPNFDDLDIDEKKIFLDVATLFIGMDKDDVIQTLNYSVRFPENGITILEEKSLVTIDSNNRIGMHTLVRAMGSEIIREQSIGMPETKMYDVFLSFRGEDSRAKFISHLDSSLQNAGIYVFKDDDGIPRGDQISVSLLQAIGQSRISIVILSKNFANSKWCMLELERIVEIRSTNGMVVVPVFYEVDPSEVRHQTGEFGKAFDSLISTKKVDEYTKRNWKTALHEVGGRAGVVIINSRNESEDIKKIVELVTRLLDKTELFVADHPVGVESRVQEVIQLLNSQKSKDPLLLGIWGMGGIGKTTIAKAVYNKIRHDFEAKSFLLNVREVWKLDNDKVSLQQRLLSDIYKTTKIKIDTVESGKIILQEKLRKKRIFLVMDDVNKLDQLNALCGNRKWFGEGSRIIITTRDDDLLSRLEVDHVYRMKEMDENESCELFNWHAFKQPIPGEGFTSLSRDVVKYSGGLPLALQVIGSFLLTKRRQREWNSVLEKRKLIPNDEVLEKLKISFDGLSDDDMKDIFLDIAFFFIGMDREDVTEILKDCGHFSEIGISVLLQQSLVTVDRKNKIGMHDLLRDMGREIVRKKSKEGGKEPSRLWRYEDVHELSKDAISLYVKGLTLKMSRLESTTCLETKEFEKMDRLKLLQFSGVQLDGDYKVLSKELRWLCWHGFPLKFTPEDFYQGSLVALDLKYSNLELVWRKAQKIPPTGSGLLPGDNSPNWLTFNSNDSSVTFEVPEVDGRNLKTIMCIVYSSSADKTTTEGFQVVLVINYTKNTIQVCKRDGLQATYDEKEWQRVISNIEPGNQIKVIVGFTNEFIVKMTTIYLVYDDQPFDVKTKHCQVPDKNGIVSSVDEIHVLEQIVEETHLSSQKTVSVGRQISQVQPLQTSGLPEVVTSFGSCVPGSVKPQIRPKSDPTINGIELPQITIEEHLPPMPQLENTGPIMINGIELPQITIEEHLPPEARLKYQFDQFSSSISQTLDSLREQNEQIAAHQQRLEEKIDVQAQKLDSLMTLLQQLVPRNPYTLPL 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00636 1159 Gene3D - 561 646 IPR042197 -
Tsu06g00636 1159 Gene3D - 61 145 IPR042197 -
Tsu06g00636 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 154 IPR027417 -
Tsu06g00636 1159 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 840 959 - -
Tsu06g00636 1159 Pfam TIR domain 226 387 IPR000157 GO:0007165
Tsu06g00636 1159 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 223 IPR044974 GO:0006952
Tsu06g00636 1159 PRINTS Disease resistance protein signature 503 517 - -
Tsu06g00636 1159 PRINTS Disease resistance protein signature 596 610 - -
Tsu06g00636 1159 PRINTS Disease resistance protein signature 426 441 - -
Tsu06g00636 1159 Gene3D - 368 556 IPR027417 -
Tsu06g00636 1159 Gene3D - 191 362 IPR035897 -
Tsu06g00636 1159 SUPERFAMILY "Winged helix" DNA-binding domain 632 738 IPR036390 -
Tsu06g00636 1159 SUPERFAMILY Toll/Interleukin receptor TIR domain 221 367 IPR035897 -
Tsu06g00636 1159 CDD AAA 403 555 - -
Tsu06g00636 1159 ProSiteProfiles TIR domain profile. 224 391 IPR000157 GO:0007165
Tsu06g00636 1159 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 234 827 IPR044974 GO:0006952
Tsu06g00636 1159 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 840 959 IPR044974 GO:0006952
Tsu06g00636 1159 Pfam NB-ARC domain 54 127 IPR002182 GO:0043531
Tsu06g00636 1159 Pfam NB-ARC domain 406 625 IPR002182 GO:0043531
Tsu06g00636 1159 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 234 827 - -
Tsu06g00636 1159 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 47 223 - -
Tsu06g00636 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 657 IPR027417 -
Tsu06g00636 1159 SMART till_3 225 365 IPR000157 GO:0007165
Tsu06g00636 1159 Coils Coil 1107 1134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00636 Tsu-Chr6 5556248 5565088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00636 223 844 WRKY Transcription Factor Family AT4G12020 29.641 1.15e-64 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00636 - - mtr:MTR_7g088950 1032.71