Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00632 ATGGGGCATGGGGGGATCGGGAAAACAACCCTTGCTAAAGCTGTTTACAATAAAATTCGTCATGATTTTGATGGAAAGAGCTTCTTGCTCAATGTCGGGGAAGTTTGGAAACTCGATAATGGCAAAGTTTCTTTACAGCAACAACTTCTTTCTGACATCTACAAAACTACAACGATAAAGATACAAACAATTGAATCTGGAAAAACTATATTACCGACAAGACTTTGTGATAAAAGGATATTTCTTGTAATTGATGATGTGGATGAATTGGATCAATTGAAAGCTCTGTGTGGAAATCGAAATTGGTTTGGTGAGGGAAGTATAATAATCATCACCACAAGAAACAAGGATTTACTTGGGGGGATTGAAGATGACCGCGTACTCAGAATAAAGGAAATGGGTGAAAATGAATCTCTAGAACTTTTTAATTGGCACGCATTCAAGCAACCAATTCCTAGAGAAGGTTTTACTAACCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGATTGCCGCTAGCTCTTGAAGTCATTGGGTCCCTTTTGTTTACTCAAACAGAGGAAGCAGTGTGGAAGGATGTACTGAAGAAACTTAAAGTGATTCCCAATGAGAAAGTTTCAGAGCAGCTCAGAATAAGTTATGATGGTTTAAGTGATGAGGATGTGAAAGATATATTCCTTGACATTGCTTTTTTCTTTATTGGCATGGATCGGGAAGATGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGACATTGGAATAAATGTCCTCGTACAACGAAGCCTTATCACTGTTGATAGGAAAAACAAGATTGGAATGCATGATTTGCTACAAAAAATGGGAAGAGACATCATCGGGGAGAAATCAAAAGAGGAGAGGAAGGAGCCAAGTAGATTATGGGGTTACAAGGATGTGCTTGATGCGTTGTCAAAAGATACCACTTTAGATGTCAAGGGATTGACTTTAAAGATGTCAAGAATGGACTCACCAACTAATTTGAAAACCAAAGCATTTGAGAAGATGGACAAGCTTAGACTGCTTCAACTTTCTCGGGTAAAACTTGATGGAGATTACAAATATCTTTCAAGACATCTTAGCTGGCTTAGTTGGCATCGATTCCTTTTAGAATTTATACCGACAGGCTTTCATCAAGATAATCTAGTTGCCCTTGACATGAAATATTCCAATCTGGAACAAGTGTGGATGGAATCTCAGTTGTTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCACAACTTGAGACATACTCCAGACTTTTCAAACTTGCCAAATCTCGAAAAGTTAATACTTAAGGATTGTCCAAATTTGTCTTCAGTGTCTTCTAGCCTTCGTGAACTTCCAAGTAGCATCTATAAGTTATACTCGCTGAAAACTCTCATTCTATCTGGATGTACAATTGATACTGGGTTGAAAGAGGATATGGAACAAATGAAATCTTTAACCACCGTGCTTTTGGATACCACTAATATAACAAAGACAAAGATGTATGATGTGTTCTTGAGTTTTAGAGGCGTAGAAACTCACGCGAAATTCATTTCACATCTGTATTCCTCTCTTCAAAATTGTGGGATTTATGTTTTCAAAGACGACGGTGAGATTCAGGGAGGAGATGTGATCTCAGTCTCATTGTTGCAAGCAATTGGCCAGTCTAGAATTTGTATTGTTGTTTTGTCTAAAGATTATGCTATTTCAAAATGGTGTATGCTGGAGTTGGAGAGAATTGTGGAAATAAGTAGAACCAATGATATGATTGTTGTACCAGTGTTCTATGATGTAGATCCCTCAGAAGTACGTCGTCAGACAGGAGAGTTTGGACAAAatttcaattcttttttatcaacaatATCAGTGGATGAATACACAAAGCAGAATTGGAAAATAGCACTCCATGAAGTTAGTGTCAGATCAGGGATTGTCATTAACAATTCCAgGAATGAAAGCGAGGATATCAAGAATATTGTTGAACGAGTCATCCGTTTCCTAGAAGAAAAGGAAGGAGAGAATCAATCTGAGCGTAGAGGTTATTCACCTCCTTGTTCGGAAAATGATGAAGACAACCAAGATAGTACCGACAGTGAATCATCTCATGCTTCATCTCCTCCTAAGGAAACTATGAATGAAACAGAATTTCTGAATGCCATACAAGATGATCATGAAGTCCCTCCTACTGGTATTCAAATTTCGAATGTTGCGATTCCTTCCAATATTCCTATTGATGATGAGCTTCAAACTGTATTAGCTGCTTTCAACATTGACTTAGAAAACAATGCTACTGCTGCGATAGAGAGTTTCCTATCATCACATGGTTTTTCGAGTGACCCAATAGTTTCAACTTCACAAAGTGGTGCCTCATCTCAACTAACCACTACTGTTGAGTCTCTGGTTCAAGAACTTCGAAGGTTAGTTTCTGATGGACCTCCATTTGATAGCTTTTCTTCGATACTGGCTTTGGATCAGTCTCTTGACTCATTGAAGCAAAAACTTAGAGTTCATCAACACCTTTTTCCTGCTTCACAACTTGAAGGCTTTACCACAGTCTTGACTAATCTTGAAGATATTGTAAAGACTTATCGTGGTTATGAGCAAGAGAGGACACTCAAAGAACATTCTGAATCTGAAGTTGCAAAGTTCGCGATTGCTATGAATGAATCCAAAAACAAGTTTAATAAGTATCAAAATCTTATAAGTGACTGTGAGAATGGTGACAAAGAGATTATTACAAAAGTTGAGGCATTTAAGAGAAAAATCGAAGGCTTGGAGATGGAGCAGAGAAATTTGAAAGCTCGAAAAGAATCTGCTATAGAAAACATGAATTCTGAAAAGAGAGCTTTGCATTCACAAGCGGCCAGTCTAACTGCCCATCAATCTCAACTTCGAGCCTCACGAGACAAGCTTTCTACTCTAGATAGAAACCTTCAGCAATGTAAAGCTACTTATGCTAGGATATTTCTTGTAATTGATGATGTGGATGAATTGGATCAATTGAATGCTCTGTGTGGAAATCGAAATTGGTTTGGTGAGGGAAGTATAATAATCATCACCACAAGAAACAAGGATTTACTTGGGGGGATTGAAGTTGACCATGTACACAGAATAATGGAAATGGATTACCATGAATCTCTAAAGCTTTTTAATTGGCACGCATTCAAGCAACCAATTCCTAGAGAAGGTTTTACTAACCTTTCTAGAGATGTTGTTAAGTACTCTGGAGGATTGCCGCTAGCTCTTCAAGTCATTGGGTCCCTTTTGTTTACTCAAACAAAGGAAGCAGAGTGGAAGGATGTACTGGATAAACTTAAACTGATTCCCAATAAGAAAGTTTCAGAGAAGCTCAGAATAAGTTATGATGGTTTAAGTGATGATGCGAAAGACATATTCCTTGACATAGCTTTTTTCTTTATTGGCATGGACCGGGAAGATGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGTATTTGGAATAAGTGTCCTCGTACAActgttgaaataa 3522 0.3748 MGHGGIGKTTLAKAVYNKIRHDFDGKSFLLNVGEVWKLDNGKVSLQQQLLSDIYKTTTIKIQTIESGKTILPTRLCDKRIFLVIDDVDELDQLKALCGNRNWFGEGSIIIITTRNKDLLGGIEDDRVLRIKEMGENESLELFNWHAFKQPIPREGFTNLSRDVVKYSGGLPLALEVIGSLLFTQTEEAVWKDVLKKLKVIPNEKVSEQLRISYDGLSDEDVKDIFLDIAFFFIGMDREDVTEILKDCGHFPDIGINVLVQRSLITVDRKNKIGMHDLLQKMGRDIIGEKSKEERKEPSRLWGYKDVLDALSKDTTLDVKGLTLKMSRMDSPTNLKTKAFEKMDKLRLLQLSRVKLDGDYKYLSRHLSWLSWHRFLLEFIPTGFHQDNLVALDMKYSNLEQVWMESQLLVKLKILNLSHSHNLRHTPDFSNLPNLEKLILKDCPNLSSVSSSLRELPSSIYKLYSLKTLILSGCTIDTGLKEDMEQMKSLTTVLLDTTNITKTKMYDVFLSFRGVETHAKFISHLYSSLQNCGIYVFKDDGEIQGGDVISVSLLQAIGQSRICIVVLSKDYAISKWCMLELERIVEISRTNDMIVVPVFYDVDPSEVRRQTGEFGQNFNSFLSTISVDEYTKQNWKIALHEVSVRSGIVINNSRNESEDIKNIVERVIRFLEEKEGENQSERRGYSPPCSENDEDNQDSTDSESSHASSPPKETMNETEFLNAIQDDHEVPPTGIQISNVAIPSNIPIDDELQTVLAAFNIDLENNATAAIESFLSSHGFSSDPIVSTSQSGASSQLTTTVESLVQELRRLVSDGPPFDSFSSILALDQSLDSLKQKLRVHQHLFPASQLEGFTTVLTNLEDIVKTYRGYEQERTLKEHSESEVAKFAIAMNESKNKFNKYQNLISDCENGDKEIITKVEAFKRKIEGLEMEQRNLKARKESAIENMNSEKRALHSQAASLTAHQSQLRASRDKLSTLDRNLQQCKATYARIFLVIDDVDELDQLNALCGNRNWFGEGSIIIITTRNKDLLGGIEVDHVHRIMEMDYHESLKLFNWHAFKQPIPREGFTNLSRDVVKYSGGLPLALQVIGSLLFTQTKEAEWKDVLDKLKLIPNKKVSEKLRISYDGLSDDAKDIFLDIAFFFIGMDREDVTEILKDCGHFPVFGISVLVQLLK 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00632 1173 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 513 672 - -
Tsu06g00632 1173 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 987 1170 - -
Tsu06g00632 1173 SUPERFAMILY Toll/Interleukin receptor TIR domain 500 642 IPR035897 -
Tsu06g00632 1173 MobiDBLite consensus disorder prediction 674 714 - -
Tsu06g00632 1173 Pfam NB-ARC domain 960 1112 IPR002182 GO:0043531
Tsu06g00632 1173 Pfam NB-ARC domain 2 203 IPR002182 GO:0043531
Tsu06g00632 1173 Gene3D - 504 676 IPR035897 -
Tsu06g00632 1173 Gene3D Ribonuclease Inhibitor 289 503 IPR032675 -
Tsu06g00632 1173 Gene3D - 867 1038 IPR027417 -
Tsu06g00632 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 972 1138 IPR027417 -
Tsu06g00632 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 228 IPR027417 -
Tsu06g00632 1173 Gene3D - 1 126 IPR027417 -
Tsu06g00632 1173 PRINTS Disease resistance protein signature 406 422 - -
Tsu06g00632 1173 PRINTS Disease resistance protein signature 74 88 - -
Tsu06g00632 1173 PRINTS Disease resistance protein signature 167 181 - -
Tsu06g00632 1173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 501 IPR044974 GO:0006952
Tsu06g00632 1173 Gene3D - 133 217 IPR042197 -
Tsu06g00632 1173 Gene3D - 1044 1128 IPR042197 -
Tsu06g00632 1173 Pfam TIR domain 505 678 IPR000157 GO:0007165
Tsu06g00632 1173 ProSiteProfiles TIR domain profile. 503 670 IPR000157 GO:0007165
Tsu06g00632 1173 SUPERFAMILY "Winged helix" DNA-binding domain 204 310 IPR036390 -
Tsu06g00632 1173 SMART till_3 504 644 IPR000157 GO:0007165
Tsu06g00632 1173 SUPERFAMILY L domain-like 328 502 - -
Tsu06g00632 1173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 513 672 IPR044974 GO:0006952
Tsu06g00632 1173 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 987 1170 IPR044974 GO:0006952
Tsu06g00632 1173 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 501 - -
Tsu06g00632 1173 Coils Coil 918 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00632 Tsu-Chr6 5518365 5527652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00632 2 474 WRKY Transcription Factor Family AT5G45050 30.723 1.86e-59 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00632 - - mtr:MTR_4g020850 721.079