Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00631 ATGCATGATTTGCTACGAGACATGGGAAGAGACATAAAAGAGGGGGGGAAGGAGCCAAGTAGATTATGGGGTTACAAGGATGTGCTTGATGCGTTGTCAAAAGATACCAGTACTTTAGATGTCAAGGGATTGGCTTTAATGTCAAAAATGGACTCACCAACTTCTTTGCAAACCAACAAATTTGAGAAGATGGACAAGCTTAGATTGCTTCAACTTTCTGACGTACAACTTGATGGAGATTACAAATATCTTTCAAGACATCTTAGGTGGCTTAGTTGGCATAGATTCCCTTTCCAATTTATACCTGCAGACTTTCATCAAGATAATCTAGTTGCTGTTGACTTGAAATATTCCAGTCTTGAAGGAGTGTGGATGAAGTCTCAGTTGTTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCACAACTTGAGACATACTCCAGACTTTTCAAACTTGCCAAATCTCGAAAAGTTAATACTTCAGGATTGTCCAAATTTGTCTTCAATTTCTTCTAGTATAGAACATCTCAGAAAAATTCTGTTAATAAATTTGAGAGATTGTACTGGCCTTCCTGAATTTCCAAGCAGCATCTATAAGTTAGACTCGCTCAAAACTCTCATTCTGTCTGGATGTATAAAAATTGGCAAGTTGGGAAAAGATATACGACAAATGAAATCTTTAACCACCTTGCTTTGTGATAACACTGCTATAATGCGAAAGATGTACTACGTGTACTTGAGTTTCAGAGGGGAAAACAGTAACCAAAAATTCATTTCACATCTCAATTCCTCTTTTGAATATGCTCATATTCATGTTTGCAAAGACAACGATGGGATTCATCAAGGGGATAAGATCTCAGTCTCATTGCAAGCAATCGGTCAGTCTAaaatttctattgttttttttactagaaaTTATGCTAATTCAAAATGGTGCATGATGGAGTTGGAAAGAATTGTGGAAATGAGTAGAACCAATGGTATAGTGATTGTGCCAGTGTTCTATGAGGTAGATCCTTCGGATGTACGCAATCAGACAGGAAAGTTTGGACAAGAATTCGATTCTCTTATAACAACAGAAAAAGTGGATGAAAACACAAAGATGAATTGGAAAACAGCACTCCATGAAGTTGGTGGCAGAGCAGGGGTTGTCATCGAAAATTCCAGGAATGAAAGCGAGGATATCAAGAAAATAGTTGAAATTGTTACTCGTTTTTTACGAGACATGCTAGAAATGTTTGTTGCTGACTATCCAGTGGAATTAGAATCACGGGTACAAGATGTTATTCAACTATTCAACagtcaaaaatcaaaagaaCCTCTACTGGTAGGGATATGGGGCATGGGAGGGATCGGGAAAACAACCCTTGCTAAAGCCGTTTATAACGAAATTGGTCATGATTTTTATGGAAAGAGCTTCCTGTTAAATGTCAGGGAAGTTTGGAAACTAGATAATCACAAAGTTTATTTACAGAAACAACTTCTTTCTGGCATCTACAAAAGTAAAAAGATAGAGATAGACACAGTTGAATCAGGAAAAATGATATTACAGAGAAGACTTTGTCAGAAAAGGATATTTCTTGTAATTGATGATGTGAATGATTTGGATCAATTGAATGCTCTATGTGGAAGTCCAAAATGGTTTGGTGAGGGAAGTATAATAATCATCACAACAAGAGATTATGATTTACTAAGTAGGCTTGAAGTTGACCATGTATACAGAATGAAGGAAATGGATGACGGTGACTCTCTCGAGCTTTTTTGTTGGCATGCATTCAAGCAACCGATTCCTAGAGAAGGTTTCGCTTACCTTTCTAGAGAGTTTGTCAGGTACTCTGGAGGACTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTCGCTAGAAGGGAAGAAGTGTGGCGTAGTGAATGGGAGAAACTCAAATGGATTCCTCATAATAAAGTGTCAGCAAAGctcaaaataagttttaatgCTTTAAGGGATGATGATCTGAAAGATATATTCCTTGGAATCGCTTTATTCTTTATTGGTATGGACCGGGCAGATGTAACTGAGATATTAAAAGACTGCGGGCATTTTTCAGAAATTGGAATAGCTATTCTCATAGAACAAAGCCTTGTAACTGTTGATAGGAAAAACAAGATTAGAATGCATACTTTGCTACAAGACATGGGAAGAGAGATCGCCCGGATGAAATCAAATGGGTATGTATTACTGCATCAGAAGGCCGTACACTACGTTACGAGTACTTTAGATGTCAAGGGATTGGCTTTAAAAACGCCATTTCTGTATCCAATTAATTTGCATACGACAAAATTTAAGAAGATGGACAAGCTTAGATTGCTTCAACTTTCAAGCATACAACTTAATGGAGATTACAAATATCTTTCAAAAGAAATCAGGTGGTTAAGTTGGAATGGATTCCCTTTAAAATTTATACCTGCAGACTTTTATCAAGATAATCTAGTTGCTCTTGACTTGAAATATTCCAATCTGGCACGAGTGTGGAGGAAGTCTCAGTTGCTGGTGAAACTGAAATTTCTTAATCTTAGTCATTCTTGCTACTTGAGACATACTCCAGACTTTTCAAACTTGCCAAATCTTGAAAAGTTAATACTTAAAGATTGTCCAAGTCTGTCTTCAGTTTCATCTAATATAGGACAGCTGAAAAAAATTCTGTTAATAAATTTGAAAGATTGTACTGGCCTTCATGAACTTCCAAGGAGCATCTATAAGTTAGACACGGTGAAAACTCTCATTCTTTCTGGATGTACAAAAATTGACAAGTTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACCCTGGTTGCGGATAATACTGCTATAGCAAGAGTTCCATTTGCAGTAGTAAGATCAAAAAGCCTTGCATATATTTCCCTCTGTGGCTATGAAGGATTGACGCGTAAAGTGTTTCCTTCTATTATCCAGTCTTGGTTGTCTCCAACAAATAGCATCCCATCCTTGGTTCAAATATTTGCAGGAACTTCGTTTCTTGATATCacacatgaacaaaataatAGTTCCTATTCATATGGCCTATCATCCATTTTTGAAGACCTTCAAAATCTTCAACGTCTTTGGTTGAAATGTGATTCAGAAGCTCAATTAAATCAAACTGTGGCAAGTATTTTGTATAGCTTTAACACTCAAAACTGTGAGGAATTCTCAAATATGGGGACTTCAGAATCAACTCATTGTCAGAGTCAAGTTTGTATTTCAAGctcaaaaaatttattaacaTCCCATTTGATTCAAATGGGAATGAGCTGCGATGTCcttagagaaaatattttgcAGAAAATGCCTCCCATTGGATCAGGTTTGCTCCCCAGTGACAACTATCCATATTGGCTAACCTTCAATAACAACTGTTCTTCTGTAACTTTTGAAGTACCCCAAGTGGACAGGCATTGTTTGAAGACAATCATGTGCATTGCCTATTCTTCTTCCCCAGACAATACAACAACAGAAGGTTTCAAAGTTTTGTCGGTAATAAATTACACAAAGAACACCATTCAGGTCTACAAGAGAGGTGGATTACTAGCCACCTCTGATGAGGAGGAGTGGCAGAGGGTAATATCAAATATAGAACCTGGAAACAAAATTAAGGTGATTGTTGGTTTTACAAATGAAATCACTGTGAAGAAGACAACAATTTATCTTGTATATGATGAGCCAGATGAAAATATATTTGGTAGGCTCTTCTTTGCTATTCCTTCCCTTGCTCGTACTGTTCTGACTTCACGGCCATTCTGGTTCTGTTTGGCTGGTATAATGGTTTGGTCATCTCGCCGCCGTTTTGAGAAGCGGAGAAGAGACAACCCTATTCTAAGGGAAGTAGCATCCACGAGCTCTCAAGGATTCAATGATCCAAAATCTTTGGACAAAAACCCTTCGGTTGATTTACAAGAACTGAAGAGAAAGGGTTGA 3960 0.3667 MHDLLRDMGRDIKEGGKEPSRLWGYKDVLDALSKDTSTLDVKGLALMSKMDSPTSLQTNKFEKMDKLRLLQLSDVQLDGDYKYLSRHLRWLSWHRFPFQFIPADFHQDNLVAVDLKYSSLEGVWMKSQLLVKLKILNLSHSHNLRHTPDFSNLPNLEKLILQDCPNLSSISSSIEHLRKILLINLRDCTGLPEFPSSIYKLDSLKTLILSGCIKIGKLGKDIRQMKSLTTLLCDNTAIMRKMYYVYLSFRGENSNQKFISHLNSSFEYAHIHVCKDNDGIHQGDKISVSLQAIGQSKISIVFFTRNYANSKWCMMELERIVEMSRTNGIVIVPVFYEVDPSDVRNQTGKFGQEFDSLITTEKVDENTKMNWKTALHEVGGRAGVVIENSRNESEDIKKIVEIVTRFLRDMLEMFVADYPVELESRVQDVIQLFNSQKSKEPLLVGIWGMGGIGKTTLAKAVYNEIGHDFYGKSFLLNVREVWKLDNHKVYLQKQLLSGIYKSKKIEIDTVESGKMILQRRLCQKRIFLVIDDVNDLDQLNALCGSPKWFGEGSIIIITTRDYDLLSRLEVDHVYRMKEMDDGDSLELFCWHAFKQPIPREGFAYLSREFVRYSGGLPLALQVIGSFLFARREEVWRSEWEKLKWIPHNKVSAKLKISFNALRDDDLKDIFLGIALFFIGMDRADVTEILKDCGHFSEIGIAILIEQSLVTVDRKNKIRMHTLLQDMGREIARMKSNGYVLLHQKAVHYVTSTLDVKGLALKTPFLYPINLHTTKFKKMDKLRLLQLSSIQLNGDYKYLSKEIRWLSWNGFPLKFIPADFYQDNLVALDLKYSNLARVWRKSQLLVKLKFLNLSHSCYLRHTPDFSNLPNLEKLILKDCPSLSSVSSNIGQLKKILLINLKDCTGLHELPRSIYKLDTVKTLILSGCTKIDKLEEDIEQMKSLTTLVADNTAIARVPFAVVRSKSLAYISLCGYEGLTRKVFPSIIQSWLSPTNSIPSLVQIFAGTSFLDITHEQNNSSYSYGLSSIFEDLQNLQRLWLKCDSEAQLNQTVASILYSFNTQNCEEFSNMGTSESTHCQSQVCISSSKNLLTSHLIQMGMSCDVLRENILQKMPPIGSGLLPSDNYPYWLTFNNNCSSVTFEVPQVDRHCLKTIMCIAYSSSPDNTTTEGFKVLSVINYTKNTIQVYKRGGLLATSDEEEWQRVISNIEPGNKIKVIVGFTNEITVKKTTIYLVYDEPDENIFGRLFFAIPSLARTVLTSRPFWFCLAGIMVWSSRRRFEKRRRDNPILREVASTSSQGFNDPKSLDKNPSVDLQELKRKG 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00631 1319 Gene3D Ribonuclease Inhibitor 749 1113 IPR032675 -
Tsu06g00631 1319 CDD AAA 436 572 - -
Tsu06g00631 1319 SMART till_3 242 381 IPR000157 GO:0007165
Tsu06g00631 1319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 240 IPR044974 GO:0006952
Tsu06g00631 1319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 252 1231 IPR044974 GO:0006952
Tsu06g00631 1319 MobiDBLite consensus disorder prediction 1288 1319 - -
Tsu06g00631 1319 SUPERFAMILY Toll/Interleukin receptor TIR domain 233 383 IPR035897 -
Tsu06g00631 1319 ProSiteProfiles TIR domain profile. 241 411 IPR000157 GO:0007165
Tsu06g00631 1319 Gene3D - 241 409 IPR035897 -
Tsu06g00631 1319 SUPERFAMILY "Winged helix" DNA-binding domain 649 736 IPR036390 -
Tsu06g00631 1319 PRINTS Disease resistance protein signature 443 458 - -
Tsu06g00631 1319 PRINTS Disease resistance protein signature 520 534 - -
Tsu06g00631 1319 PRINTS Disease resistance protein signature 865 881 - -
Tsu06g00631 1319 PRINTS Disease resistance protein signature 613 627 - -
Tsu06g00631 1319 Pfam TIR domain 243 403 IPR000157 GO:0007165
Tsu06g00631 1319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 671 IPR027417 -
Tsu06g00631 1319 SUPERFAMILY L domain-like 770 1112 - -
Tsu06g00631 1319 SMART AAA_5 440 583 IPR003593 -
Tsu06g00631 1319 MobiDBLite consensus disorder prediction 1288 1303 - -
Tsu06g00631 1319 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 240 - -
Tsu06g00631 1319 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 252 1231 - -
Tsu06g00631 1319 SUPERFAMILY L domain-like 51 240 - -
Tsu06g00631 1319 Pfam NB-ARC domain 424 642 IPR002182 GO:0043531
Tsu06g00631 1319 Gene3D - 415 574 IPR027417 -
Tsu06g00631 1319 Gene3D Ribonuclease Inhibitor 31 240 IPR032675 -
Tsu06g00631 1319 Gene3D - 579 662 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00631 Tsu-Chr6 5504578 5513420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00631 241 959 WRKY Transcription Factor Family AT4G12020 28.856 1.17e-64 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00631 - - mtr:MTR_7g088950 1265.75