Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00628 ATGTGTTCCTTAAGCTCCTCTTCAAGAAACAACAAGTCTGAAATTGATCTTCAAGGTTGGACTTACGATGTGGTTTTGAGTTACCATGACAAAGACTCCGGTAAATTATTTGCATCATATCTCTATTCCGGTCTCACACAGGCCGGATATCGCACACTTATAAGTGAAGATCATACAAGTTGCTCAGAAGTCGAACGTTCTAGAAGTTTTATCATCGTTTTCTCAAGTACTTTTGATGCTTCAACATGGTTTTTGGAACAATTGGAGAAGATATTGGAGTTTCATGGAACCACAGGGCAGGTGGTTCTGCCTGTGTTCTATGATGTAGATCCCACTGATGTATGTCAGCAGAAAGGAGTGTTTGCACAAAAAAGTTGGTTCAATGAACACAAGTCAAGGCGTTATAGAGCCGTGCTCTCTAAAGTTGCCAATATGTCAGGATTACGTGTTAAGGATTCTATTTCTCGCGACAgaagtaaaaatattaatgacatAGTGCAACATTTGACTCGTCTGATAGAAGGCAAATATTTATCCGTTGCTGAACACCCAGTTGGAGTAGAAGCTCGGGTGCAAGATGTGATTCAACTATTGAACAATGGACAACCAGAAAAGACCATAATTGTAGGGATATGGGGGATGAACGGGGTTGGCAAAACAACCATTGCAAAAGCCACTTATAATCAAATAGGTTTCAGTTTTGAGGGCCAAAGCTTCCTCGAAAATGTTAATGATATTTGGAAACAGAAAGATGGCCAAGTTTCTCTACAGGAAAAACTTTTTTTAGACATCTACACAAGAAAGCAACTGGGAGATAGAGATACAGTTGTATTTGGAGAAAGGGCATTTGATAAAAGACTTCCTCGTAAGAAGATATTTCTTGTACTCGACAATGTGAGTGAATTGGAACAGTTCAATACTTTGTATGGTAGTTGTGAAAGCATTGGTCACGGAAGTAGAATAATTATCACAACAAGAGATAGACATTTACTTCATTACCTTCGAGTTGACCATGTatacaaaatgaaatatatggACATCGCTGAATCTCTTGAACTGTTTAGTTGGCATGCATTCAAATTTCCAAGTCCTATAGAAAGTTATGCCGAACTTTGTAGAGATGTTGTTGAGTATTGTGGGGGACTGCCGCTAGCTCTTAAACTCATAGGGTCTTTTTTGTTTGATAGATCTGGAGGGGAGTCGAAGTTTGTACTGGAAAAACTCAAAATTCCCACCGATATGATAATGAGAAATCTAAGAACAGACTTTGATGATTTAGATGGTGATGAGAAAAAATTATTCCTTGATGTAGCTACTTTATATATAGGGATGGACAGAGATGATTTAATTCAGGCATTACAATACTCTGTGGAGTACCTGGAAGTTGGAATAACAATACTTGAACAGAAAAACCTTATAACTATAGATAGCAAGAACAGGATTGGAATGCATAGTTTGGTACAAGCAATGGGGAGAGAAATCGAAAGGCAACATGGTATAGCTGAGACAAAGATGTATGATGTGTTCTTGAGTTTTAGAGGCGAAGACAGTCGCGCAAAATTCATTTCACATCTGTATTCCTCTCTTCAAAATGCTGGGATTTATGTTTTCAAAGACGACGATGGGATTCAGAGAGGAGATCAGATCTCAGTCTCATTGTTGCAAGCAATTGGTCAGTCTAGAATTTGTATTGTTGTTTTGTCTAAAAATTATGCTAATTCAAAATGGTGTATGCTGGAGTTGGAGAGAATTGTGGAAATCAGTAGAACCAAGGATATGGTTGTTGTACCAGTGTTCTATGAGGTAGATCCCTCGGACGTACGCAATCAGACAGGAGAGTTTGGACAAAAATTCAATTCTCTTTTATCAACAATATCAGTGGATGAATACACAAAGCAGAATTGGAAAACAGCACTCCATGAAGTTGGTGGCAGAGCAGGGGTTGTCATCATAAATTCCAGGAATGAAAGCGAAGATATCAAGAACATAATTGAACTTGTTACTCATTTGCTAGACAAGACAAAATTCTTTGTTGCTGATCATCCAGTAGGACTAGAGTCACGGGTACAAGATGTTATTCAACTACTGAACAGCCAAAAAACATGCAATCCTCTACTACTAGGGATATGGGGCATGGGAGGGATCGGGAAAACAACCCTTGCTAAAGCCGTTTATAACGAAATTTGTCATGATTTTGACGGAAAGAGCTTCCTGTTCAATGTCAGGGAAGTTTGGAAGCAAGAGAATGGTAAAGTTTCTTTACAGCAACGACTTTTTTCTGACATCTACAAAACTACACAAATAAAGATAGACACAGTTGAATCTGGAACAATGATATTACAGGAAAGACTTCGTGAGAAAAAGATATTTCTTGTAATTGATGATGTGAATAAGGTGGACCAATTGAATGCTCTGTGTGGAAATCGAAAATGGTTTGGCGAGGGAAGTAGAATAATCATCACAACAAGAGATGATGATTTGCTTAGTAGGCTTGAAGTTGACCACGTATACAGAATAAAGGAAATGGATGAAAATGAATCTCTAGAACTTTTTAATTGGCATGCATTCAAACAACCAATTCCTGGTGAAGGTTTCACTAGCCTTTCTAGAGACGTTGTTAAATACTCTGGAGGACTGCCCCTAGCTCTTCAAGTCATTGGATCCTTTTTGTTGACTAAGAGAAGGGAAGCTGAGTGGAATGGTGTACTGGAGAAACTCAAACTGATTCCCAATGTTGAAGTGTCGGAGAAGCTTAGAATAAGTTTTGATGGTTTAAGTGATGATGATATGAAAGATATATTCCTTGATATTGCCTTTTTCTTTATCGGTATGGATCAGGAAGATGTGACCATGATATTAAAAGACTGTGGTCATTTTCCAGAAATTGGAATAAGTGTCCTTGTACAACAAAGCCTTATAACTGTTGATAGGAAAAACAAGATTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAGATCATCCGCAAGAAATCTAAAGTGGGAGGCAAGGAGCCAATTAGATTATGGCGATACGAGGATGTGCATGAGTTATCAAAAGATCCTATTTCTCTATATGTTAAGGGACTGACTTTAAAGATGTCAAGACTGGAGGCACCAATTTGTTTACAAACCAAAGAATTTGAGAAGATGAACAGGCTTAAATTGCTTCAATTTGCTGGCATACAACTTGATGGAGATTACAAATATCTTTCAAAAGATCTCAGGTGGCTTTGTTGGCATGGATTCCATTTAAAATATACACCTAAAGACCTTAATCAAGAAAGTTTAGTTGCTCTTGACTTACAATATTCCAATCTAGAACGAGTGTGGAGGAAGGATCAGTTGCTGGTGAAGCTGAAAATTCTTAATCTTAGTCATTCTCACAACTTGAGACATACCCCAAACTTTTCAAACTTGCCAAATCTTGAAAAGTTAATACTTAAAGATTGTCCAAGTTTATCTTCAGTTTCTTCTAGTATAGGACATCTCAGAAAAATTCTGTTGATAAATTTGAAAGATTGTACAGGCCTTTGCGAACTTCCGAGGAGCATCTATAAGTTAGACTCGGTCAAAACTCTCATTCTGTCTGGATGTACAAAAATTGACAAGCTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACCCTGGTTGCGGATAGCACTGCTATAGCAAGAGTTCCCTTTGCAGTAGTAAGATCAAAAAGCATCGCATATATTTCCCTCTGTGGGTATGAAGGATTTGCTCGTAAAGTGTTTCCTTCTATTATCCAGTCTTGGTTGTCGCCAACAAATAATGTTCTATCTCTAGTTCAAATATCTGCAGGAACTCCATGTCTTGATTTCACTGATGAACAAAATAAGAGTTTCTATTGTCTACCGTCCACTTTTGAAGACCTACAGAATCTTCAACGTCTCTGGTTGAAATGTGACTCAGAAGCCCAATTAAATCAAACTGTGGCAAGTATTTTGTATAGCTTTAACACTCAAAATTGTGAGGGGTTCTCAAATATCTGGACTACATCAATTCATCGGCGCAGTCAAGACGGTGTTTCAAGCTTAAAAAATTCCTTGACATCCCTTTTGATCCAAATGGGAATGAGCTGCAATGTGACCGACATtctcacaaaaaatattttgcagAAAATACCTCCCACCGGGTCTGGTTTACTCCCCGGTGACAACTCTCCGAATTGGCTAACCTTCAATAAAAATGGTTCTTCTGTAACATTTGAAGTACCTGATGTAGATGGGCGTAATTTGAAGACTATCATGTGCATTGTCAATTCTTCTTCTGCTGACAATGCAACAACAGAAGGTTTTAAAGTTGTGTTGGTTATAAATTACACAAAGAACACCATTCAGGTCTACAAGAGAGATGGATTACTAGCCACCTCTGATGTGGAGGAGTGGCAGAGGGTAATATCAAATATAGAACCTGGAAACAAAATTAAGGTGATTGTTGGTTTTACAAATGAATTCACTGTGAAGAATACAACAATTTATCTTGTATACGATGATCAACCAATTGACATAAAGAAGAAGCACTGCCATGAGCCAGATAAGAATGGCATTGTTTCTAGTGGTGATGAAAATcttgtgcttgagcaaattgttgAAGAAACCCATCTTTCATCTCAAACAACTGTACCTGTGGGTCCGCAAATCAGGCAAGTCCAACTTTTGCAAACTTCTGACCTCCCCGAAGTAGTCACATCTTTCGATAGTTGTGTTTCTGTGTCTGTTAAGTCTCAAACTAGGCCTTTTAAACCTGAACCTCCTATCACTTATACTTACAATCAAGAACGGAAGTCCTTCATCCAAATACCTGCTAATGAGTTTGTCAAACTTCTACCTACAATAGAACCCATTGATAGTACTCTTCACACTGTAGCCTCTGATACTGACTCTGATGAGCTGTTGCCTCGAGTCAAACCAAGAAAGGCTGGATGGCAGTATGAATGCAGATGGGAATTTGTGAACCCTGTGGCTGATCTGCACACTCCATCGCCTTTAGCATTACCCTGGTATGACACACCTGAAACTGAGCCTCAAATAGAAATATCAAATACTCAAACAGTTTCTTCTCAATCTCTAGACATAGCCAATGACATCATCTCTGATACTGAAACAACTATAACTTTAGATGTACCTCAACCTCCACCTCTAGCCTTCCAAGGTCTTGAGGAATTTCACTCAACATTTATCAAAAAGGCAAAGGACTTACAAGAGCAAAGTCTTGTCTCTGTGGATCCTGAGGATATTAAGTCCAAATGGGATGATTTTATGGCTTGGGTATCTGAATGGATGATGAAAACCAGAGATGCTGGAATCATCTGCGCTAAAGAGAATTTTCGATTGGCAGTAGCTTCACTCTTTGAATGGTTTTATTATGTTGCTGAAGCAATGAAGATTTCTGTGCAAAAGAATAATTTGAGGATGTTGCCGGCTCCTGGACCTCAAACTCTGGTTGAAGTGGTCTTAGCCTCTATGCCTCTACTCGAGAATATTGGTCCGATAACAATCAATGGCATAGAACTTCCACAGATCACAATTGAGGAACATCTTCCTCCTATGCCTCAACTGGAGAATACTGGTCCGATAATGATCAATGGCATAGAACTTCCACAGATCACAATTGAGGAACATCTTCCTCCTGAAGCTCGACTCAAATATCAATTTGATCAATTTTCTTCGAGTATCAGTCAAACTTTGGATTCTTTGCGTGAACAAAATGAACAAATTGCTGCACATCAACAAAAGCTTGAAGAAAAGATTGATGTTCAGGCTCAGAAGTTGGACTCCTTGATGACTTTACTTCAACAACTCGTGCCTAGGAGTCCTTAG 5850 0.3817 MCSLSSSSRNNKSEIDLQGWTYDVVLSYHDKDSGKLFASYLYSGLTQAGYRTLISEDHTSCSEVERSRSFIIVFSSTFDASTWFLEQLEKILEFHGTTGQVVLPVFYDVDPTDVCQQKGVFAQKSWFNEHKSRRYRAVLSKVANMSGLRVKDSISRDRSKNINDIVQHLTRLIEGKYLSVAEHPVGVEARVQDVIQLLNNGQPEKTIIVGIWGMNGVGKTTIAKATYNQIGFSFEGQSFLENVNDIWKQKDGQVSLQEKLFLDIYTRKQLGDRDTVVFGERAFDKRLPRKKIFLVLDNVSELEQFNTLYGSCESIGHGSRIIITTRDRHLLHYLRVDHVYKMKYMDIAESLELFSWHAFKFPSPIESYAELCRDVVEYCGGLPLALKLIGSFLFDRSGGESKFVLEKLKIPTDMIMRNLRTDFDDLDGDEKKLFLDVATLYIGMDRDDLIQALQYSVEYLEVGITILEQKNLITIDSKNRIGMHSLVQAMGREIERQHGIAETKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDGIQRGDQISVSLLQAIGQSRICIVVLSKNYANSKWCMLELERIVEISRTKDMVVVPVFYEVDPSDVRNQTGEFGQKFNSLLSTISVDEYTKQNWKTALHEVGGRAGVVIINSRNESEDIKNIIELVTHLLDKTKFFVADHPVGLESRVQDVIQLLNSQKTCNPLLLGIWGMGGIGKTTLAKAVYNEICHDFDGKSFLFNVREVWKQENGKVSLQQRLFSDIYKTTQIKIDTVESGTMILQERLREKKIFLVIDDVNKVDQLNALCGNRKWFGEGSRIIITTRDDDLLSRLEVDHVYRIKEMDENESLELFNWHAFKQPIPGEGFTSLSRDVVKYSGGLPLALQVIGSFLLTKRREAEWNGVLEKLKLIPNVEVSEKLRISFDGLSDDDMKDIFLDIAFFFIGMDQEDVTMILKDCGHFPEIGISVLVQQSLITVDRKNKIGMHDLLRDMGREIIRKKSKVGGKEPIRLWRYEDVHELSKDPISLYVKGLTLKMSRLEAPICLQTKEFEKMNRLKLLQFAGIQLDGDYKYLSKDLRWLCWHGFHLKYTPKDLNQESLVALDLQYSNLERVWRKDQLLVKLKILNLSHSHNLRHTPNFSNLPNLEKLILKDCPSLSSVSSSIGHLRKILLINLKDCTGLCELPRSIYKLDSVKTLILSGCTKIDKLEEDIEQMKSLTTLVADSTAIARVPFAVVRSKSIAYISLCGYEGFARKVFPSIIQSWLSPTNNVLSLVQISAGTPCLDFTDEQNKSFYCLPSTFEDLQNLQRLWLKCDSEAQLNQTVASILYSFNTQNCEGFSNIWTTSIHRRSQDGVSSLKNSLTSLLIQMGMSCNVTDILTKNILQKIPPTGSGLLPGDNSPNWLTFNKNGSSVTFEVPDVDGRNLKTIMCIVNSSSADNATTEGFKVVLVINYTKNTIQVYKRDGLLATSDVEEWQRVISNIEPGNKIKVIVGFTNEFTVKNTTIYLVYDDQPIDIKKKHCHEPDKNGIVSSGDENLVLEQIVEETHLSSQTTVPVGPQIRQVQLLQTSDLPEVVTSFDSCVSVSVKSQTRPFKPEPPITYTYNQERKSFIQIPANEFVKLLPTIEPIDSTLHTVASDTDSDELLPRVKPRKAGWQYECRWEFVNPVADLHTPSPLALPWYDTPETEPQIEISNTQTVSSQSLDIANDIISDTETTITLDVPQPPPLAFQGLEEFHSTFIKKAKDLQEQSLVSVDPEDIKSKWDDFMAWVSEWMMKTRDAGIICAKENFRLAVASLFEWFYYVAEAMKISVQKNNLRMLPAPGPQTLVEVVLASMPLLENIGPITINGIELPQITIEEHLPPMPQLENTGPIMINGIELPQITIEEHLPPEARLKYQFDQFSSSISQTLDSLREQNEQIAAHQQKLEEKIDVQAQKLDSLMTLLQQLVPRSP 1949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00628 1949 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 34 498 - -
Tsu06g00628 1949 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 514 1503 - -
Tsu06g00628 1949 PRINTS Disease resistance protein signature 1115 1131 - -
Tsu06g00628 1949 PRINTS Disease resistance protein signature 706 721 - -
Tsu06g00628 1949 PRINTS Disease resistance protein signature 783 797 - -
Tsu06g00628 1949 PRINTS Disease resistance protein signature 876 890 - -
Tsu06g00628 1949 Coils Coil 1902 1929 - -
Tsu06g00628 1949 CDD AAA 683 835 - -
Tsu06g00628 1949 Gene3D - 500 674 IPR035897 -
Tsu06g00628 1949 Gene3D - 173 339 IPR027417 -
Tsu06g00628 1949 Gene3D - 675 837 IPR027417 -
Tsu06g00628 1949 ProSiteProfiles TIR domain profile. 20 169 IPR000157 GO:0007165
Tsu06g00628 1949 SUPERFAMILY L domain-like 983 1311 - -
Tsu06g00628 1949 SMART till_3 21 145 IPR000157 GO:0007165
Tsu06g00628 1949 SMART till_3 505 645 IPR000157 GO:0007165
Tsu06g00628 1949 Gene3D - 841 926 IPR042197 -
Tsu06g00628 1949 Gene3D - 345 427 IPR042197 -
Tsu06g00628 1949 SUPERFAMILY Toll/Interleukin receptor TIR domain 502 647 IPR035897 -
Tsu06g00628 1949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 436 IPR027417 -
Tsu06g00628 1949 ProSiteProfiles TIR domain profile. 504 671 IPR000157 GO:0007165
Tsu06g00628 1949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 669 937 IPR027417 -
Tsu06g00628 1949 Gene3D - 16 172 IPR035897 -
Tsu06g00628 1949 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 147 IPR035897 -
Tsu06g00628 1949 Pfam NB-ARC domain 686 907 IPR002182 GO:0043531
Tsu06g00628 1949 Pfam NB-ARC domain 188 395 IPR002182 GO:0043531
Tsu06g00628 1949 Pfam TIR domain 22 169 IPR000157 GO:0007165
Tsu06g00628 1949 Pfam TIR domain 506 667 IPR000157 GO:0007165
Tsu06g00628 1949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 498 IPR044974 GO:0006952
Tsu06g00628 1949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 514 1503 IPR044974 GO:0006952
Tsu06g00628 1949 SMART AAA_5 205 346 IPR003593 -
Tsu06g00628 1949 SMART AAA_5 703 846 IPR003593 -
Tsu06g00628 1949 Gene3D Ribonuclease Inhibitor 1023 1391 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00628 Tsu-Chr6 5469592 5477293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00628 22 497 WRKY Transcription Factor Family AT4G12020 28.660 1.03e-41 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00628 - - mtr:MTR_7g088950 1788.08