Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00623 CACTCGTTGGAGGATGTGATTGGTTTGGTTCCGGTAGCAGGATCATCATAACAACAAGGGACAAATCATTGGTAGATAAGCATGTGATGGATGGTGCTATcgttgaaaaatataaaatggaagaGTTGAATGCTCATGACTCTCTGGAACTCTTTTGCTGGCATGCCTTTAATACCAGTAATCCTGAAGAAAACTTTGAAGGTGTTTCTAGTCTTGCCGTGAGTTATGCAAAGGGCGTTCCATTGGCTTTGAAAGTAATAGCCTCCAATTTGAAGGGTGGGAGCCCAATGGACTGGGAAATGGAATTGgacaaatataagaaaattccAAATGCTGAGATTCAAGGAGTACTCGAAATAAGCTATATTAGTTTATTTGAGTTGGACCAGAAAACTTTCTTGGACATTGCTTGTTTCTTTAAAGGGGAGAGATGGGAGTATGTTGAAAGGATACTAAAGGCTTGTGGTTTCTTCCCAAGTATTCGACCATTTGTTACGAAATGTCTCATAAATATTGATGAAAATGGCTGCTTGGATATGCATGATCTAATACAAAACATGGGCAAAGAGGTTATCAGAAAGGAGTCTCCGCTAAACCTTGGTGACCGTAGCAGATTATGGTCTCATAAGGAAGTTCTTGAAGTACTCAAAGAAAACAAGGGAAGTATAAAAATTGAAGGAATAATGCTCGACTCCCCTTCTCATGAAGAAGTGTATAATTGGAGTGATAATGCCTTCAAGAAGATGGAAAATCTTAGAATTCTAATTGTTCGGAATACATCATTCCAAACAGCTCCTAGTTGTTTGCCAAATAGTTTACGGTTACTTGATTGGAAGGGGTACCCATCAATGTCTTTTCCAGCTGGTTTTTATCCCGAAAGAATTGTTGATTTTAAGTTACCTCATAGCTCTCTGATGTTGGAGAGGCCATTTCAGATATTTGAGGATTTGACATTCATGAATCTCTCTCAGTGTCAATCCATAACTCAAATACCTGATATCTCAGGAGCCATAAATTTAAGAGTATTGACACTTGATAGATGTCATAAAGTGGTAAGGTTTGCTGAATCCGTTGGATTTATGCCAAAACTTGCGTGTTTAAGTGCTTCAGAGTGTACAATGCTCAAATGTTTTGTCCCAAGTATGTACTTGCCATCTCTCGAGGTTCTCTCCTTTAACTTGTGCAAAAGACTTCAACACTTCCCTGATGTAATGCAAAAGATGGATAAACCATTAAAGATTTGGATGATAGGTACTGCTGTTAAGAGGCTTCCTAATTCCATTGGTAATCTTACGGGGCTTGAATACATAGACATGTCATTTTGCAAAGGACTTGGTGATCTATCCTGTAGCTTCTTCTTATTGCCAAAACTTGTCACCTTAAGAATTGATGGATGTTCTCAACTTGGAAATTCATTTAAAAGGTTTAGAGAGAGGCACTCAGCAGAAAACGGCTACTCGAATTTGGTGAAACTGTATTTAAGTGATGCTGATCTATCAGATGCAGATCTTCACATAATTCTTGAAAGTTTTCCAAAATTGGAAGACTTGAATGTGTCGCACAATAAATTTGCAGCTCTCCCAAAATCAATCAAAGCATCTTTGCATTTGAAAAGTCTTGATGTGAGTTATTGCAGGAATCTTATAGAAATTCCAGAACTTCCATTAAGCATTCAAAAAGTTGATGCAAGATATTGCGGAAGCTTAACTTCAAAGGCATCAAGCGTGCTATGGTCCAAGGTTCCACAAGAGATCCAAAGAATACAAGTTGCCATGCCGATGCTGAAAAGGGAGATTCCAGAATGGTTTGACTGTAGTTACTCTCAAGGGATTCCGATTTTTTGGGCTCGCAGGAAGTTTCCCATTGTTGCTTTAGCATTAGTTTTCCAGGAAGTAAAAAAACCGACTGAcaattttccttcatttagtGATGAAATAAGATTGTTGACTGGAATCAAGAGATTTTACATTATTAGCCTCCATTTGTTTATTGATGGCCAAGAAATTTGTAGCAGGGATTTCCATTATTTCAATGTTGGGGAAGATCATGTGCTATTGTGTGATCTCCGAGTTTTGTTTAGTGATGAAGAGTGGCAGAACCTTGATGCAAGTCTTGGAGATGACTGGAagacaattcaaattcaatgtGTTCCAAACTTGGAGCAAGACTTGAGTCTGACTACTTGGGGAGTTTATGTGTACAATCAAGAAACAAGCATGAATAATATACAATTCATACCTCCCAATCTGATCAACTCGTTTTCCCATATGCTATCATCATATTTGGTTCAACATAGATCTTATGAGCAGTACATGAAACATATTTTGAACAGTTTCAAATTTACAGACATTTTGAATGCAGATTCCATTTATCGACCATCAGATGTTGAAGACATTTTTTTCAAAGTGATTCGCCGCTGTTTGAGAAATACCAACGCTGAAATTACAGATGAGGTATTAGAGATGCTAAAAGAGAATGCACCACAACATATTGATGAACATGAATGTTATCAATTGGAAGACAGATTTGTGGAGAATTTATTGACGGCATATTTAGAATTGGAAAACACCTTGAACATCAGAATGTCTATTGTTTTAGTGTACACTAGTAATATGCTGGGAACAAGCCATCGCTATTGGGGAAACATAGACATAAAATTGGGAGATCCAGTTTTCGAATCAGTGTTGAGTAGGTTTAACGATTTTCCGTTTCGAGTTGGGACAACCACTGAAACCTCATCCACTATCCTTGTATTGAAATGCCATCCTGAGTTTGAGGAGGAAGCTTCGAGCTCTAGCATGGAAGAATCCTTCGAGGAAGGATTCCATGAGCCTGAATTTGAAGAGTTAATGAGGAGGATAGAGCAAGATGCTATGAGCTTCAATAAACATTATGggaaaatgaaggcatctaTTGTTCAAATTGATGGGCCATTATTTTCTGGATTTTATGAAACAGAAGCGTTCATCTTCACACTTATGAGAAATCGTTTAATGAGATTGGCAATGTTCGGATCACCATTCAAGGTTAAGATCACACCTTATGGGACGATTAGGTCAGAGGACGAATCTTTACCTATTCTCAGGACACATTTCTGGTTATTGTACTCGGTTCTTCTTGTTCTAATGATACTGTCATTTTGTTATACTCATAAGATATTAGTGTGGGGTTGGGGGCTTGTCAAGCAATTTGTTGTTGTGTCTTGTAAAAAATCGTTTCTGGCTTCTCCTCTTGCGATGCAACCTCGTCCTATGGCTTCAGGAATTTGA 3269 0.3717 LVGGCDWFGSGSRIIITTRDKSLVDKHVMDGAIVEKYKMEELNAHDSLELFCWHAFNTSNPEENFEGVSSLAVSYAKGVPLALKVIASNLKGGSPMDWEMELDKYKKIPNAEIQGVLEISYISLFELDQKTFLDIACFFKGERWEYVERILKACGFFPSIRPFVTKCLINIDENGCLDMHDLIQNMGKEVIRKESPLNLGDRSRLWSHKEVLEVLKENKGSIKIEGIMLDSPSHEEVYNWSDNAFKKMENLRILIVRNTSFQTAPSCLPNSLRLLDWKGYPSMSFPAGFYPERIVDFKLPHSSLMLERPFQIFEDLTFMNLSQCQSITQIPDISGAINLRVLTLDRCHKVVRFAESVGFMPKLACLSASECTMLKCFVPSMYLPSLEVLSFNLCKRLQHFPDVMQKMDKPLKIWMIGTAVKRLPNSIGNLTGLEYIDMSFCKGLGDLSCSFFLLPKLVTLRIDGCSQLGNSFKRFRERHSAENGYSNLVKLYLSDADLSDADLHIILESFPKLEDLNVSHNKFAALPKSIKASLHLKSLDVSYCRNLIEIPELPLSIQKVDARYCGSLTSKASSVLWSKVPQEIQRIQVAMPMLKREIPEWFDCSYSQGIPIFWARRKFPIVALALVFQEVKKPTDNFPSFSDEIRLLTGIKRFYIISLHLFIDGQEICSRDFHYFNVGEDHVLLCDLRVLFSDEEWQNLDASLGDDWKTIQIQCVPNLEQDLSLTTWGVYVYNQETSMNNIQFIPPNLINSFSHMLSSYLVQHRSYEQYMKHILNSFKFTDILNADSIYRPSDVEDIFFKVIRRCLRNTNAEITDEVLEMLKENAPQHIDEHECYQLEDRFVENLLTAYLELENTLNIRMSIVLVYTSNMLGTSHRYWGNIDIKLGDPVFESVLSRFNDFPFRVGTTTETSSTILVLKCHPEFEEEASSSSMEESFEEGFHEPEFEELMRRIEQDAMSFNKHYGKMKASIVQIDGPLFSGFYETEAFIFTLMRNRLMRLAMFGSPFKVKITPYGTIRSEDESLPILRTHFWLLYSVLLVLMILSFCYTHKILVWGWGLVKQFVVVSCKKSFLASPLAMQPRPMASGI 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00623 1088 Pfam NB-ARC domain 10 91 IPR002182 GO:0043531
Tsu06g00623 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 135 IPR027417 -
Tsu06g00623 1088 Gene3D Ribonuclease Inhibitor 233 414 IPR032675 -
Tsu06g00623 1088 Gene3D Ribonuclease Inhibitor 415 594 IPR032675 -
Tsu06g00623 1088 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 822 - -
Tsu06g00623 1088 SUPERFAMILY "Winged helix" DNA-binding domain 112 216 IPR036390 -
Tsu06g00623 1088 SUPERFAMILY L domain-like 232 574 - -
Tsu06g00623 1088 Gene3D - 41 124 IPR042197 -
Tsu06g00623 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 822 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00623 Tsu-Chr6 5373013 5406060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00623 1 468 WRKY Transcription Factor Family AT4G12020 31.762 1.49e-52 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00623 - - mtr:MTR_4g023040 1170.99