Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00622 ATGATGGAGGGTGTTTTTGTTGCCGCTTATGCATCTTATCTTGGGCTCTtattttatagggacaaaaGTGAAGTTATTAATGACATAGTGCAACATTTGACTCATTTGATAGAAGACAAATTATTTTCCGTTGCTACACACCCGGTGGGAATAGAAGCTCGGATGCAAGATGTTATTCAACTATTGAGCAATGAACAACCAGAAAATACCATAATCATAGGGATATGGGGGATAAATGGGGTTGGTAAAACAACAATTGCAAAAGCCACTTATAATCAAATGGGTTGCAGTTTTGAGGGAAAAAGCTTCCTCCTAAATGTTAATGAAGTTTGGGAGCAGAGTAATGGCCAAGTTTCTTTACAGCAACAACTTCTTTCAGACATCTACAAATCAACAAAGATACAAATAGATACCATTGAATCAGGAAAGGTGGTATTACGTGAAAGGCTTCGCCGTAAGAAGATATATCTTGTACTTGACAATGTGAATAAATTGGAACAGTTGAATGTTTTGTGCGGTAGTCATGAATGGTTTGGTCATGGAAGTAGAATAATTATCACAACAAGTGATAAACATATACTGCGTAGCCTTCAAGTTGACCATGTATATAGAATGAAATATATGGACACTACTGAATCTCTTGAGCTTTTTAGTTGGCACGCATTCAAAATTCCGAGTCCTATAGAAAGTTACGCGGACCTTTGTAGAGATGTTGTTGAGTACTGTGGGGGATTGCCGCTAGCTCTTGAAGAAATTGGGTCTTTTTTTTCTGGTAAATCTTTAGCGGAGTCAAAGTTTTTGCTGGAGAAACTCAAAACCAATCCCAGCGATATGATAATCAGAAAGCTAAGAACAAATTTTGATGATTTACATGtttatgacaaaaaaatcttCCTTGATTTAGCTACTTTATTTATTGAGATGGACAAAGATGATTTAATTCAGACATTAAATTACTTTGTGCGTTTCCCAGAAGATGGAATAACAGTCCTTGAAGATAAATGCCTTGTAACTATAGATAGCAATAACAGGATTGGAATGCATACTTTGGTACGAGCAATGGGAAAAGAAATCATAAGGCAGCAGGGTATGGCCGAGACAAAGTTGTACGATGTATTCTTGAGTTTCAAAGGGGAAGACAGTCGTGCGAAATTCATTTCACATCTCGATTCCTCTCTTCAAAATGCTGGGATTTATGTTTTCAAAGACGATGATGGGATTCGACGAGGAGATCGGATCTCAGTTTCATTGTTGCAAGCAATCAATCAGTCTAGAATTTCTATTGTAGTTTTGTCTAGAAATTTTGCTAATTCAAAATGGTGTATGCTGGAGTTGGAGAGAATTGTGGAAATCAGTAGAACCAAGGATATGGTGGTTGTGCCAGTGTTCTATCAGGTAGATCCCTCAGAAGTACGTCATCAGACAGGAGAGTTTGGAAAAGCTTTTGAATGTCTTATATCAACAATATCAGTGGATGAATACACAAAGAGGAACTGGAAAACAGCTCTCATTGAAGTTGGTGGAAGAGCAGGGGTTGTCATCATAAATTCCAAGAATGAAAGCGAGGATATCAAGAAAATAGTTAAACTTGTTACTCATTTGCTAGACAAGACAGAATTATTTGTTGCTGATCATCCAGTAGGAGTAGAATCACGTGTACAAGACGTTATTCAACTACTGAACAGCCACAAATCAAAAGTTCCTCTAATGCTAGGGATATGGGGCATGGGAGGGATCGGAAAAACAACCATTGCTAAAGctgtttataataaaattcgTCATGATTTTGAGGCAAAGAGTTTCCTATTGAATGTCAGGGAAGTTTGGAAACTTGATAATGGCAAAGTTTCTCTACAGCAAAGACTTCTTACTGACATCTACAGAACTACAAAGATAAAGATAGATACAGTTGAATCaggaaaaattatattacaGGAAAGACTTTGTGAGAAAAGGATATTTCTTGTAATTGATGATGTGAGTAATGTGGATCAATTGAATGCTTTGTGTGGAAATCGAAAATGGTTTGCTGAGGGAAGTAGAATAATCATCACAACAAGAGATGATGATTTACTTAGTAGGCTTGAAGTTGACCAAGTATACAGAATGAAGGAAATGGATGACAGTGAATCTCTCGAACTTTTCAATTGGCATGCATTCAAGCAACCAATTCCTAGAGAAGGTTTTACCGACCTTTCTAGAGATGTTGTTAAGTACTCGGGAGGACTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTTGACTAGGAGAAGGGAAGCGGAGTGGAAGAGTGTACTGGAGAAACTCAAACTGATTCCCAATGATGAAGTGTCAGAGAAGCTCAGAATAAGCTTTGATGGTTtaagtgatgatgatgtgaaAGATATATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGACCGGGAAGACGTAACTGAGATATTAAAAGACTGTGGGCATTTTCCAGAAATTGGAATAAGTATTCTGGTACAACAAAGCCTTATAACTGTTGATAGGAAAAACAAGATTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAGATCGTCCGCAAGAAATCTAAAGAGAGGGGCAAGGAGCCTAGTAGAATATGGCGTTATGAGGATGTGCATGAGTTGTCAAAAGATACTTGTACTTTAGATGTTAAGGGATTGACTTTAACGATGTTAAGAATGGACTCAACAACTTTGGAAACCAAAGCATTTGAGAAGATGGACAAGCTTAGATTGCTTCAACTTTCTGGCGTACAACTTGATGGGGATTTTAAAAATCTTTCAAGACATCTTAGGTGGCTTAGTTGGCATGGATTCCCCTTAAAATTTACACCTGCAGACTTTCATCAAGATAATCTGGTTGCTATCCACTTGAAATATTCCAATCTGGAACGAGTGTGGAGGAAGTCTCAGTTGCTGGTGAAGTTGAAAATTCTTAATCTTAGTCATTCTCATAACTTGAGACATACCCCAGACTTTTCGAACTTGCCAAATCTTGAAAAGTTAATACTTAAGGATTGTCCAAGTTTGTCTTCAGTTTCGTCTAGTATAGGACATCTCAAAAAAATTCTCTTAATAAATTTGAAAGATTGTACAGGCCTTCGTGAACTTCCCAGGAGCATCTATAAGTTAGAATCGGTGAAAACTCTTATTCTGTCTGGATGTACAAAAATTGTCAAGTTGGAAGAGGATATAGAACAAATGAAATCTTTAACCACACTGGTTGCGGATAACACTGCTATAACAAGAGTTCCCTTTGCAGTAGTAAGATCAAAAAGCATCGCATATATTTCCCTTTGTGGCTATGAAGGATTCACACGTAAAGTGTTTCCTTCTATTATCCAGTCTTGGTTGTCTCCAAAAAATAGTCTCCTATCCTTAGTTCAAACATTTGCAGGAACTTCATGTCTCGATATCACTGATGAACAGAATAATAGTTTCTATTGTCTATCATCCATTTTTGAAGAATTTCAGAATCTTCAACGTCTTTGGTTGAAATGTGATTCAGAAGCTCAACTAAATCAAACTGTAGCAAGTATTTTGGATAGCTCCAACACACGAAATTGCAAGGGATTCTCAAACATCGGGACTTCAGCATCAATTCATTCCCGTAGTCAAGTTAATATTTCAAGCTCTAAAAATTCCTTGACATCCCTTTTGATTCAAATGGGAGTGGGTTGCAATGTCGCCAACATTcttagagaaaatattttgcAGAAAATTCCTCCCATTGGGTCTGGTTTACTCCCGGGGAACAACTATCCCGATTGGCTAACCTTCAATAGCAACGGTTCTTCTGTAACTTTCGAAGTACCTCAAGTAGGCGGGCGTTCTTTGAAGACAATCATGTGCATTGCCTATTCTTCCCCAGACAATACAACAACAGAAGGTTTTAAAGTTGTGTTGGTAATAAATTGCACAAAGAACACCATTCAGGTCTATAAGATAGGTGCATTATTAACATCTTTTGGTGAGGATGAGTGGAAGAGTGTAATATCAAATATAGAACCCGGAAACGAAATTAAGGTGATTGTTGTTTTTACAAATGAATTCATTGTGAAGAAAACAGCCATTTATCTTGTATATGATCAACCAAATGAGGAAAAGACGAATCATTGCCATGAGACAGATGAGAATGGAATTGTTTCTAGTGGTGATGaaaatATATTTGGTAGATTCATCTTCGCTATTCCTTCCCTTGCTCGGACTGTTCTGACTTCACGGCCTTTCTGGTTCTGTTTGGCTGGTATTATGGTTTGGTCGTCTCGCCGCCGTTCTGAAAAACGAAGAAGAGACAACCCTATTCTAAGGGAAGTAGCATCCATGAGCTCTCAAGGATTCAATATTCCAGAACCTCTGGAGAAAACCCCTTTGGTTGATGTCAAGAAGTGA 4413 0.3714 MMEGVFVAAYASYLGLLFYRDKSEVINDIVQHLTHLIEDKLFSVATHPVGIEARMQDVIQLLSNEQPENTIIIGIWGINGVGKTTIAKATYNQMGCSFEGKSFLLNVNEVWEQSNGQVSLQQQLLSDIYKSTKIQIDTIESGKVVLRERLRRKKIYLVLDNVNKLEQLNVLCGSHEWFGHGSRIIITTSDKHILRSLQVDHVYRMKYMDTTESLELFSWHAFKIPSPIESYADLCRDVVEYCGGLPLALEEIGSFFSGKSLAESKFLLEKLKTNPSDMIIRKLRTNFDDLHVYDKKIFLDLATLFIEMDKDDLIQTLNYFVRFPEDGITVLEDKCLVTIDSNNRIGMHTLVRAMGKEIIRQQGMAETKLYDVFLSFKGEDSRAKFISHLDSSLQNAGIYVFKDDDGIRRGDRISVSLLQAINQSRISIVVLSRNFANSKWCMLELERIVEISRTKDMVVVPVFYQVDPSEVRHQTGEFGKAFECLISTISVDEYTKRNWKTALIEVGGRAGVVIINSKNESEDIKKIVKLVTHLLDKTELFVADHPVGVESRVQDVIQLLNSHKSKVPLMLGIWGMGGIGKTTIAKAVYNKIRHDFEAKSFLLNVREVWKLDNGKVSLQQRLLTDIYRTTKIKIDTVESGKIILQERLCEKRIFLVIDDVSNVDQLNALCGNRKWFAEGSRIIITTRDDDLLSRLEVDQVYRMKEMDDSESLELFNWHAFKQPIPREGFTDLSRDVVKYSGGLPLALQVIGSFLLTRRREAEWKSVLEKLKLIPNDEVSEKLRISFDGLSDDDVKDIFLDIAFFFIGMDREDVTEILKDCGHFPEIGISILVQQSLITVDRKNKIGMHDLLRDMGREIVRKKSKERGKEPSRIWRYEDVHELSKDTCTLDVKGLTLTMLRMDSTTLETKAFEKMDKLRLLQLSGVQLDGDFKNLSRHLRWLSWHGFPLKFTPADFHQDNLVAIHLKYSNLERVWRKSQLLVKLKILNLSHSHNLRHTPDFSNLPNLEKLILKDCPSLSSVSSSIGHLKKILLINLKDCTGLRELPRSIYKLESVKTLILSGCTKIVKLEEDIEQMKSLTTLVADNTAITRVPFAVVRSKSIAYISLCGYEGFTRKVFPSIIQSWLSPKNSLLSLVQTFAGTSCLDITDEQNNSFYCLSSIFEEFQNLQRLWLKCDSEAQLNQTVASILDSSNTRNCKGFSNIGTSASIHSRSQVNISSSKNSLTSLLIQMGVGCNVANILRENILQKIPPIGSGLLPGNNYPDWLTFNSNGSSVTFEVPQVGGRSLKTIMCIAYSSPDNTTTEGFKVVLVINCTKNTIQVYKIGALLTSFGEDEWKSVISNIEPGNEIKVIVVFTNEFIVKKTAIYLVYDQPNEEKTNHCHETDENGIVSSGDENIFGRFIFAIPSLARTVLTSRPFWFCLAGIMVWSSRRRSEKRRRDNPILREVASMSSQGFNIPEPLEKTPLVDVKK 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00622 1470 SMART till_3 369 509 IPR000157 GO:0007165
Tsu06g00622 1470 PRINTS Disease resistance protein signature 740 754 - -
Tsu06g00622 1470 PRINTS Disease resistance protein signature 647 661 - -
Tsu06g00622 1470 PRINTS Disease resistance protein signature 978 994 - -
Tsu06g00622 1470 PRINTS Disease resistance protein signature 570 585 - -
Tsu06g00622 1470 ProSiteProfiles TIR domain profile. 368 535 IPR000157 GO:0007165
Tsu06g00622 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 532 801 IPR027417 -
Tsu06g00622 1470 SUPERFAMILY L domain-like 847 1174 - -
Tsu06g00622 1470 SMART AAA_5 567 707 IPR003593 -
Tsu06g00622 1470 SMART AAA_5 69 206 IPR003593 -
Tsu06g00622 1470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 301 IPR027417 -
Tsu06g00622 1470 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 14 365 - -
Tsu06g00622 1470 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 378 1368 IPR044974 GO:0006952
Tsu06g00622 1470 Gene3D - 208 291 IPR042197 -
Tsu06g00622 1470 Gene3D - 705 790 IPR042197 -
Tsu06g00622 1470 Gene3D Ribonuclease Inhibitor 878 1252 IPR032675 -
Tsu06g00622 1470 Pfam NB-ARC domain 52 274 IPR002182 GO:0043531
Tsu06g00622 1470 Pfam NB-ARC domain 550 771 IPR002182 GO:0043531
Tsu06g00622 1470 Gene3D - 543 701 IPR027417 -
Tsu06g00622 1470 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 365 IPR044974 GO:0006952
Tsu06g00622 1470 Pfam TIR domain 370 531 IPR000157 GO:0007165
Tsu06g00622 1470 Gene3D - 364 542 IPR035897 -
Tsu06g00622 1470 Gene3D - 28 202 IPR027417 -
Tsu06g00622 1470 SUPERFAMILY Toll/Interleukin receptor TIR domain 365 510 IPR035897 -
Tsu06g00622 1470 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 378 1368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00622 Tsu-Chr6 5365498 5373515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00622 20 362 WRKY Transcription Factor Family AT4G12020 29.395 1.32e-32 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00622 - - mtr:MTR_7g088950 1813.12