Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00617 ATGGCGAATGACGATGATTTCACACACGACGTTTTTCTTAGTTTCAGAGGCGCAACTCGCTACTCCTTCACTGATCATCTCTATCGTTCACTTCTACGTCACGGAATTAATGTTTTCAGAGACGATCAAAAACTCAAAATCGGAAATGAAATCGGTCCTTCACTTCTACAAGCAATTGAAGTTTCTAGAATCTCAATCGTTGTTCTTTGTGAAGACTATGCTTCTTCCAGTTGGTGCCTTGATGAACTTATTAAGATTGTTGACTGTTATGAAAATAATGGAAAATCgattattgttatattttataggGTTGAACCTTCAGATGTCAGGCATCAGAAAAATAGTTATGGAGAAGCTATGAGGAAACATGAAAAGAGATATGGAAGGGAATCAGAGAAGGTGAAAGCATGGAAGTTAGCTCTTAAAAGAGTGTGTGCTCTTAGTGGATTTCATTGCAAGGACAATATCTATGAATCTGagtttattgagaaaattgtCAAAGACATCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAACACCTAGTTGGACTCGATTCTCGTTTCGAACAAGTGAAATCTCTTTTTGATATTGATTCTGATGAAGTACGCATTTTGGGGATTTATGGAGGTGGTGGAATAGGAAAAACAACATTTGCCTTGGACATATATAACAAGATCAGACATCAATTTGAAGCTGCAAGTTTTCTTGCGAATATTAGAGAGAAATCAAATGAAAGCAATAGAGGCATGGAAGATCTCCAAAAAACACTTTTGTCTGAGATGGGTGAGGAAACACAGACTATGTTTGGAAGCACATTTAGAGGAAGCTCTGAAATAAAACATAGGCTTGCCCAAAAAAGAGTTCTTCTCATACTCGATGATGTTGATTCGGTAAAACAATTGGAATCACTAGCTGGAGGACATGATTGGTTTGGTTCAGGTAGCAGAATCATTGTAACAACAAGAGATATAGATGTTCTACAGAAGCATGATCtgaaaatcaaaacatataaaCTCGAAGAGCTAAATCATCATGAATCCATTGAACTCTTCTGTTGGTATGCCTTTAATATGAGAAGACCTCTAGAAAACTTTGCAAAAATCTCTTCTCATGCAATAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTAATAGGATCCAATTTGAAAGGTAAGAGCACAGAGGAGTGGGATATTGAACTGCATAAATATACAAAGGTTCCAGATGCTGAGATTCAAGGTGTACTTGAAATAAGCTACAAATGTCTATCTGACTTGCAACAGAAAGTTTTTCTAGACATTGCTTGTTTTTTCAAAGGGGAAAGATGGGATTATGTTAAAAGGATATTAGAAGCTTGTGGTTTCAACCCAGATATACGAGTATTTGTTAACAAATGTCTCATAACTGTTGATGAAAATGGTTGTTTAGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCTGTATCAAACCCTGGTGAACGTAGCAGACTATGGTTTCATAAAGATGTTCTTAATggAAGTACTACAATTGAAGGAATAATACTTCATCCCCCAAAACGTGAGACAGTAGATCAATGGGCTTGTACTGCCTTTGAGAAGATGAAAAACCTCAGAATTTTGATTGTTAGGAATACATTGTTTTCATCAGGACCTAGTCATTTGCCAAATAGTTTACGGCTACTTGATTGGAAGTGGTACCCATCAAAGAATTTTCCGCCAAATTTTTATCCATACAAAATTGTTGACTTCAAGTTACCTCATAGCTCGATGATATTGAAAAAGCCTTTTCAGACTTTCGAGGATTTAACATTCATTAATCTCTCCCATAATCAATCCATAACTCAAATTCCTGATTTGTCTGGAgctaaaagcttaagagtgttTACAGTCGATAGATGCCATAAACTAGTAAAGTTTAATATAACCGTTGGGTTTATGCCTAATTTGGTGTATTTAAGTGCTTCAGGGTGCACTGAGCTCAAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGCTTTCATTTAATTTCAGCAAAAAATTTGAACACTTCCCAGAAGTAATGCAAAAGATGAAAAACCCATTAAAGATTAACATGATAAGCACTGCCATTAAAGAGTTTCCAAAGTCTATTGGTAACCTTACAGGCCTTGAGTATATAGACATGTCAATTTGTAAAGGGCTTAAAGAACTATCAAGTAGCTTCTTATTGCTTCCAAATCTGATCACTTTAAAAATTGATGGATGCACTCAACTTGGAGAATCATTTCAAAGGTTTAAAGAGCACCATTCAGTGGCCAACGGGTATCCAAATTTAGAAACACTTCATTTTAGCGAAGCTAATCTATCATATGAAGATGTTAGTGCCATTCTAGAAAAATTTCCAGAACTAGAAGACTTGAAAGTTTCGCACAATGGGTTTGTCGGGCTCCCAAATTGCATCGGGGAATCTATGCACTTGAAAAGTCTTGATGTGAGCTTTTGCATAAATCTTACAGAAATTCCAGAACTTCCATCAAGTATTCACAAAATAGATGCAAGACACTGTCGATCCTTAACCTTGGAGGCATCAAGTTTTCTCTGGACCAAGGTTTCACAAGAGATCCAAAGAGTACAAGTTGTGATGCCGATGCTGAAAAGGAAAATTCCAGAATGGTTTGACCGCGGCACTCATGAGATTCCGCTTTTCTGGGCTCGTCGGAAGTTTCCTGTTGTTGCTATTGCATTAGTGTTCGGGGAAGTAAAAAGGGCTGACAATATTTCTGAATTTGTTGATGCTATAAAGTTGTTGAGTGGAGTCAATGACTGGAGCACTGTTAGTCTCCATTTGTTTATTGATGGCCAAGAAATTTGTAGCAAGGATTGCCATTATTTCAATGTTGGAGAAGATCACGTGCTACTTTGTGATCTACGAGTTTTGTTCAATGATGAAGAGTTGCAGAACCTTGATGCAAGTTTTGGTAATGAATGGAAGGTCTTTCAGGTTCAATATGATTCAGACTTGATTCTGACTAACTGGGGAGTTTACGTGTACAACAAGCAAGAAAAAAGCACGGATGATATTCAATTCGTACCTCCTAGTCACAATTTCTTTTCCTACATTCCATCATCACATTTAGTTCCAAAGAGATATCTAGACCTGCAAATCAAACATGTCGTCCAAAGTTTCAAGCCAAGAGACATGTTTAATGAATTTATGCCTCAAATAGAATCAGAAGAAAGTTCATTCTGGTCCTTAAACGTGCTTTTGCGGTCTTTGAGGAATGCCAAGGATGAACTTATAGAAATGACTTCTTCCTCTGTGTATGGTGCGAGTGTAAAGCAAGACCATGAAGATTCTGTAGAGGATGTGATTCAAGTATCAGAGATGCTAAAAGAGTGTTATTCAGAACATTTTACCGATTCATGTCCTGATAATCTTCAAATTGCATGTGGAGTAGCAGAAAGAATGTTGAGGGCACGGCTAGAGCTATTTAAAGAAAATTGCATGGACATTGGTATGCCTATTATTCTAGAGTATACTGATACATTAGGAGCTACAAATCGACGCTTTTGGGGAACCATGGATATAAAATTGGAAGATCCATTTTACAAACCAGTGATGAAGAGGTTAATCCAACTTTCCTTGGACCGTTCGATGGCTGACTCGAGGGAAACCTTTCTTCAATTGAAATGCAAACCTGCAGGTGAAGAGGAAGCTTCAGGCGCTCTCCTAGAAGAATCCTTGGAAGGATACTACAATCCTGAATTGGAAGAGTTAATGAAGATGATAGAGCAAAATGCTATGAGCTTTAATAAATCTTATGggaaaatgaaggcatctaTTGTTCAAACTGATGATCCATTTTCTGAAAATTATCAATTGGAATCATTAATCTTAGGAAGACTTATGATGTTAGGAAAATTGACAATGTTTGGATCAGTGACCAAGTTCAAGATCACACCTTACGGAAAGATGAGAACTGAGGACGGACCTTTTCGCTTTCTGAGGATATGTTTATGGGGTTTGATTTTGGTTGCACCTGATTCTTCACAGAAATTGTCAATTGCTCCCTATGATGCACTGACACCTCTCCTAAGTGTTGTGTCGGACACGTTTCGAACACAAACTCGCTTCAAATATGGTCACTTCTAG 4170 0.3671 MANDDDFTHDVFLSFRGATRYSFTDHLYRSLLRHGINVFRDDQKLKIGNEIGPSLLQAIEVSRISIVVLCEDYASSSWCLDELIKIVDCYENNGKSIIVIFYRVEPSDVRHQKNSYGEAMRKHEKRYGRESEKVKAWKLALKRVCALSGFHCKDNIYESEFIEKIVKDISAKLPPMPLQIKHLVGLDSRFEQVKSLFDIDSDEVRILGIYGGGGIGKTTFALDIYNKIRHQFEAASFLANIREKSNESNRGMEDLQKTLLSEMGEETQTMFGSTFRGSSEIKHRLAQKRVLLILDDVDSVKQLESLAGGHDWFGSGSRIIVTTRDIDVLQKHDLKIKTYKLEELNHHESIELFCWYAFNMRRPLENFAKISSHAISYAKGIPLALRVIGSNLKGKSTEEWDIELHKYTKVPDAEIQGVLEISYKCLSDLQQKVFLDIACFFKGERWDYVKRILEACGFNPDIRVFVNKCLITVDENGCLEMHDLIQDMGREIVRKESVSNPGERSRLWFHKDVLNGSTTIEGIILHPPKRETVDQWACTAFEKMKNLRILIVRNTLFSSGPSHLPNSLRLLDWKWYPSKNFPPNFYPYKIVDFKLPHSSMILKKPFQTFEDLTFINLSHNQSITQIPDLSGAKSLRVFTVDRCHKLVKFNITVGFMPNLVYLSASGCTELKSFVPKMYLPSLQVLSFNFSKKFEHFPEVMQKMKNPLKINMISTAIKEFPKSIGNLTGLEYIDMSICKGLKELSSSFLLLPNLITLKIDGCTQLGESFQRFKEHHSVANGYPNLETLHFSEANLSYEDVSAILEKFPELEDLKVSHNGFVGLPNCIGESMHLKSLDVSFCINLTEIPELPSSIHKIDARHCRSLTLEASSFLWTKVSQEIQRVQVVMPMLKRKIPEWFDRGTHEIPLFWARRKFPVVAIALVFGEVKRADNISEFVDAIKLLSGVNDWSTVSLHLFIDGQEICSKDCHYFNVGEDHVLLCDLRVLFNDEELQNLDASFGNEWKVFQVQYDSDLILTNWGVYVYNKQEKSTDDIQFVPPSHNFFSYIPSSHLVPKRYLDLQIKHVVQSFKPRDMFNEFMPQIESEESSFWSLNVLLRSLRNAKDELIEMTSSSVYGASVKQDHEDSVEDVIQVSEMLKECYSEHFTDSCPDNLQIACGVAERMLRARLELFKENCMDIGMPIILEYTDTLGATNRRFWGTMDIKLEDPFYKPVMKRLIQLSLDRSMADSRETFLQLKCKPAGEEEASGALLEESLEGYYNPELEELMKMIEQNAMSFNKSYGKMKASIVQTDDPFSENYQLESLILGRLMMLGKLTMFGSVTKFKITPYGKMRTEDGPFRFLRICLWGLILVAPDSSQKLSIAPYDALTPLLSVVSDTFRTQTRFKYGHF 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00617 1389 Coils Coil 238 258 - -
Tsu06g00617 1389 Pfam NB-ARC domain 196 401 IPR002182 GO:0043531
Tsu06g00617 1389 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Tsu06g00617 1389 Gene3D - 343 427 IPR042197 -
Tsu06g00617 1389 PRINTS Disease resistance protein signature 206 221 - -
Tsu06g00617 1389 PRINTS Disease resistance protein signature 378 392 - -
Tsu06g00617 1389 PRINTS Disease resistance protein signature 284 298 - -
Tsu06g00617 1389 PRINTS Disease resistance protein signature 724 740 - -
Tsu06g00617 1389 Gene3D Ribonuclease Inhibitor 523 690 IPR032675 -
Tsu06g00617 1389 Gene3D - 7 172 IPR035897 -
Tsu06g00617 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 437 IPR027417 -
Tsu06g00617 1389 Pfam TIR domain 9 181 IPR000157 GO:0007165
Tsu06g00617 1389 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 149 IPR035897 -
Tsu06g00617 1389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1111 IPR044974 GO:0006952
Tsu06g00617 1389 ProSiteProfiles Leucine-rich repeat profile. 611 633 IPR001611 GO:0005515
Tsu06g00617 1389 SUPERFAMILY L domain-like 481 865 - -
Tsu06g00617 1389 Gene3D - 173 340 IPR027417 -
Tsu06g00617 1389 Gene3D Ribonuclease Inhibitor 691 882 IPR032675 -
Tsu06g00617 1389 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1111 - -
Tsu06g00617 1389 SMART till_3 8 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00617 Tsu-Chr6 5335863 5342883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00617 9 764 WRKY Transcription Factor Family AT4G12020 31.338 4.95e-86 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00617 - - mtr:MTR_4g023040 1980.3