Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00611 ATGGATCAGAGTAGCAATGGCAATGGTAAAAGTGAACTATACTATGCTCAACTCCATTtgtacaaacatatatacaGCTTTATAAGTTCCATGGCACTCAAATCTGCCGTGGAATTAGGGATAGCAGATGTAATCCACAACCATGGAAAACCAATGACTCTTAATCAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAATCAGTGTCCTCCATCGCTTCATGCGATTGTTAACACACAATGGTTTCTTCGCCGCTATAAAGAAGAAAACAGGAGgagatcaagaagaagaaacaacatATTATGCTCTCACACCACCATCAAAGCTTCTTGTCCGCGGTGCATCAACATGTTTGGCATCCTTTACGGACCGTTATCCACTTTGTATGGACATGTGGCATTCCTCGAAGAAATGGTTCACTGAGGACAAGGATCTCAGCTTGTTTGAAAGTGCAAATGGGGATAATTTCTGGAACATGCTGAATAAAGATCCTGAATCTCATAAATGGATGAGTTTGTTTCAAGAGGCTATGGAAGCTGATTCTCAAATGTTTAAGCTTGCACTCAAAGACTGCAAGCATGTGTTTGAAGGTTTGGAGACTTTGGTTGATGTGGGAGGTGGGACTGGAGTTGTGGCAAAACTCATTCAAGAAGCATTTCCTGATATTAAATGCACTGTTTTGGATCAACCAAAGGTTGTTGGTAACTTAACtggaaacaaaaatttgaactttgttGGTGGAGATATGTTCAAATCTATCCCTCATGCTGATGCTGTTTTACTCAAGtggGTTCTGCATGATTGGAATGATGAGTTAGCCTTGAAGATATTGAAGAATAGCAAAGAAGCTATTTCTGGAAAAGGCAAAGATGGAAAGGTTATAATAATTGACATATTAATTGATGAAACAAGTGATGATCATGACTTAACTGAGTTGCAATTGAACTTTGACATGTTAATGCTTACTGTGTTCAatggaaaagaaagaggaaaaaaagaatGGGAGAAACTTATATATGATGCAGGCTTCAGCAGCTATAAGATTACTCCTATATGTGACTTCAAGTCTCTCATTGAAGTTTATCCTTAA 1092 0.3562 MDQSSNGNGKSELYYAQLHLYKHIYSFISSMALKSAVELGIADVIHNHGKPMTLNQLASSLKLHPSKISVLHRFMRLLTHNGFFAAIKKKTGGDQEEETTYYALTPPSKLLVRGASTCLASFTDRYPLCMDMWHSSKKWFTEDKDLSLFESANGDNFWNMLNKDPESHKWMSLFQEAMEADSQMFKLALKDCKHVFEGLETLVDVGGGTGVVAKLIQEAFPDIKCTVLDQPKVVGNLTGNKNLNFVGGDMFKSIPHADAVLLKWVLHDWNDELALKILKNSKEAISGKGKDGKVIIIDILIDETSDDHDLTELQLNFDMLMLTVFNGKERGKKEWEKLIYDAGFSSYKITPICDFKSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00611 363 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 8 363 - -
Tsu06g00611 363 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Tsu06g00611 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Tsu06g00611 363 SUPERFAMILY "Winged helix" DNA-binding domain 11 114 IPR036390 -
Tsu06g00611 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 362 IPR029063 -
Tsu06g00611 363 PANTHER O-METHYLTRANSFERASE 8 363 IPR016461 GO:0008168
Tsu06g00611 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Tsu06g00611 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Tsu06g00611 363 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Tsu06g00611 363 Gene3D - 1 111 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00611 Tsu-Chr6 5269131 5270319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00611 31 354 Monolignol Biosynthesis Gene Families AT5G54160 33.435 2.54e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00611 K22588 K21513 ag:AAC49856 508.834