Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00610 ATGGATGAGAGTAGCAATGGCAATGATAAAAGTGAACTATATTATGCTCAACTCCATTtgtacaaacatatatacaGCTTTATAAGTTCCAAGGCACTCAAATCTGCTGTGGAGTTAGGCATAGCAGATGTAATCCACAACCATGGAAAACCAATGACTCTTAATGAATTAGCTTCATCCTTGAAGCTCCCTCCTTCTAAAATCAGTGTCCTCTATCGCTTCATGCGATTGTTAACACACAATGGTTTCTTCGCCTCTATAAAGAAGAAAACAGGAGgagatcaagaagaagaagaagaaacagcaTATGCTCTCACACCACCATCAAAGCTTCTCGTCCGCAGTGCATCAACGTGTTTGGCATCCCTTGCCAGTGGACATCCACGTTGTATGGACATGTGGCATTCCTCGAAGAAATGGTTCGCAGAGGACAAAGAACTCAGCCTATTTGAAAGTGCAAATGGGGATAATTTTTGGAACATGCTGAACAAAGATCCTGAATCTCATAAACTGATGAGTTCGTTTCAAGAGGCTATGGAAGCTGATTCTCAAATGTTTAAGCTTGCACTTAAAGACTGCAAGCATGTGTTTGAAGGTTTGGAGACTTTGGTTGATGTTGGAGGTGGGACTGGAGTTGTGGCAAAACTCATTCAAGAAGCATTTCCTGATATTAAATGCACTGTTTTGGATCAACCACAGGTTGTTGGTAACTTAATtggaaacaaaaatttgaactttgttGCTGGAGATATGTTCAAATCTATCCCTCAGGCAGATGCTGTTTTACTCAAGtgGGTTCTACATGATTGGAATGATGAGCTAGCCTTAAAGATATTGAAGAATAGCAAAGAAGCTATTTctggaaaaggaaaagatggaAAGGTTATAATCATAGATATATCAATTGATGAAACAAGTAATGATCATGACTTAACTGAGTTGCAATTGAACTTTGACATGGTAATGCTTACTTTGTACaatggaaaagaaagagaaaaaaaagaatgggAGAAACTCATATATGATGCAGGATTCAGCAGCTATAAGATTACTCCTATATGCGACTTCAAGTCTCTCATTGAAGTTTATCCTTAG 1095 0.3479 MDESSNGNDKSELYYAQLHLYKHIYSFISSKALKSAVELGIADVIHNHGKPMTLNELASSLKLPPSKISVLYRFMRLLTHNGFFASIKKKTGGDQEEEEETAYALTPPSKLLVRSASTCLASLASGHPRCMDMWHSSKKWFAEDKELSLFESANGDNFWNMLNKDPESHKLMSSFQEAMEADSQMFKLALKDCKHVFEGLETLVDVGGGTGVVAKLIQEAFPDIKCTVLDQPQVVGNLIGNKNLNFVAGDMFKSIPQADAVLLKWVLHDWNDELALKILKNSKEAISGKGKDGKVIIIDISIDETSNDHDLTELQLNFDMVMLTLYNGKEREKKEWEKLIYDAGFSSYKITPICDFKSLIEVYP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00610 364 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Tsu06g00610 364 PANTHER O-METHYLTRANSFERASE 7 364 IPR016461 GO:0008168
Tsu06g00610 364 Gene3D - 1 112 IPR036388 -
Tsu06g00610 364 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Tsu06g00610 364 Gene3D Vaccinia Virus protein VP39 115 364 IPR029063 -
Tsu06g00610 364 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 7 364 - -
Tsu06g00610 364 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Tsu06g00610 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 363 IPR029063 -
Tsu06g00610 364 Pfam O-methyltransferase domain 134 346 IPR001077 GO:0008171
Tsu06g00610 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 364 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00610 Tsu-Chr6 5252491 5253683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00610 8 355 Monolignol Biosynthesis Gene Families AT5G54160 32.303 9.39e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00610 K22588 K21513 ag:AAC49856 517.309