Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00609 ATGGATCATCAGAGTAGCAATGGCAATGATAAAAGTGAACTATATTATGCTCAACTCCATTtgtacaaacatatatacaGCTTTATAAGTTCCATGGCACTCAAATCTGCAGTGGAGTTAGGCATAGCAGATATAATCCACAACCATGGAAAACCAATGACTCTTAATGAACTAGCTTCATCTTTGAAACTCCACCCTTCTAAAATTAATGTCCTATATCGCTTCATGCGATTGTTAACACACAATGGTTTGTTCGCCTctataaagaagaagaaaacaggAGGAGATCAAGATCAGGATCaagcagaagaagaagaagaagaagaagaagaagaagaaacaacatATTATGCTCTCACACCTCCTTCAAAGCTTCTCGTCCGTGGTGCATCAATATGTTTAGCATCCCTTACGGGCCGTCATCCACGTTGTATGGACATGTGGCATTCCTCGAAGAAATGGTTCACTGAGGACAAGGATCTCAGCTTGTTTGAAAGTGCAAATGGGGATAATTTTTGGAACATGCTGAACAAAGATCCTGAATCTCATAAACGGATGAGTTTGTTTCAAGAGGCTATGGAAGGTGATTCTCAAATATTGTTTAAGCTTGCACTCAAAGACTGCAAGCATGTGTTCGAGGGCTTGGAAACTTTGGTTGATGTGGGAGGTGGGACTGGAGTTGTGGCAAAACTCATTCATGAAGCATTTCCTGATATTAAATGCACTGTTTTGGATCAACCACAGGTTGTTGGTAACTTAATtggaaacaaaaatttgaactttgttGCTGGAGATATGTTCAAATCTATCCCTCAGGCAGATGCTGTTTTACTCAAGTGGGTTCTACATGATTGGAATGATGAGCTAGCCTTAAAGATATTGAAGAATAGCAAAGAAGCTATTTCTGGAAAAGGCAAAGATGGAAAGGTTATAATCATTGACATATCAATTGATGAAACAAGTAATGATCGTGACTTAACTGAGTTGCAATTGAACTTTGACATGCTAATGCTTACTTTGTACAatggaaaagaaagaggaaaaaaagaatGGGAGAAACTCATATATGATGCAGGCTTCAGCAGCTATAAGATTACTCCTATATGTGACTTCAAGTCTCTCATTGAAGTTTatccttaa 1140 0.3447 MDHQSSNGNDKSELYYAQLHLYKHIYSFISSMALKSAVELGIADIIHNHGKPMTLNELASSLKLHPSKINVLYRFMRLLTHNGLFASIKKKKTGGDQDQDQAEEEEEEEEEEETTYYALTPPSKLLVRGASICLASLTGRHPRCMDMWHSSKKWFTEDKDLSLFESANGDNFWNMLNKDPESHKRMSLFQEAMEGDSQILFKLALKDCKHVFEGLETLVDVGGGTGVVAKLIHEAFPDIKCTVLDQPQVVGNLIGNKNLNFVAGDMFKSIPQADAVLLKWVLHDWNDELALKILKNSKEAISGKGKDGKVIIIDISIDETSNDRDLTELQLNFDMLMLTLYNGKERGKKEWEKLIYDAGFSSYKITPICDFKSLIEVYP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00609 379 Gene3D - 3 126 IPR036388 -
Tsu06g00609 379 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 7 379 - -
Tsu06g00609 379 Pfam O-methyltransferase domain 148 361 IPR001077 GO:0008171
Tsu06g00609 379 MobiDBLite consensus disorder prediction 90 115 - -
Tsu06g00609 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 378 IPR029063 -
Tsu06g00609 379 SUPERFAMILY "Winged helix" DNA-binding domain 12 129 IPR036390 -
Tsu06g00609 379 MobiDBLite consensus disorder prediction 99 115 - -
Tsu06g00609 379 PIRSF O-mtase 1 379 IPR016461 GO:0008168
Tsu06g00609 379 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Tsu06g00609 379 Gene3D Vaccinia Virus protein VP39 130 379 IPR029063 -
Tsu06g00609 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 379 IPR016461 GO:0008168
Tsu06g00609 379 PANTHER O-METHYLTRANSFERASE 7 379 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00609 Tsu-Chr6 5245728 5246966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00609 9 370 Monolignol Biosynthesis Gene Families AT5G54160 32.880 4.42e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00609 - K22588 ag:AAC49856 502.671