Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00603 ATGGGTGCATTTCAAGTCCTATCTGCCAATACAATCAAGTCACTAAAATCAAGTaatcaaaaaattgatttaactCCATGGGATCTTCAATTTCTACTTGCTTCAACCAACAAAAGGGGGCTTCTTTATCACCATCCTGTAGCATCAGACCAAATCCAACGGCTGAGACACTCTCTAACCTCTGCCCTTTCCATTTTCCAACCTCTTGCCGGCCGTCTTAAAATAACGGAACACAAAGACAACACCGTCTCGTGTTCCGTAACATGCAACAATGCAGGTGTAACCTTTATTCATGCCGCATCAAAGAATACTTATGTTGCTGACATTCTAGAATCCACATATGTTCCTTCAGTTGTCCGttcgtttttttcttttatcggAGTTAGAAACTATGAAGGCACATCAAAACCATTGTTGGCGGTTCAAGTCACGGAGTTAGATGACGGTATCTTCATTGGCTGCACGTTCAACCATGTGGTCGGTGATGGAAACGCCACATGGAATTTCATCAATTCTTGGGCTGAAATCTCACGTGGTTGTTGTCATCATCAAATATCTaaacctccaacactagagcgttGGTTTCCAAATGGTATTCAACGGCCCATACGATTTCCTTTCACTACGGAGCCACAAAAGAATTACTCTGATAGGTTGAGTTTTCCGTCATCTGATAACGAAAAACTCTGTCTATCAGAAAGAATATTTCGCTTCACAAAGAAAAATATCGAGCAACTGAAATCGAAAGTCAACACAGAGATTAATGGTaccataaaaatttcttcactACAAGCAGTTTTAACTCACCTTTGGCGCTCTGTGATCCGTTCCAAACACCTTGATCCACAAGAAGAAGTCTACAATATGTTCGTGATAGGAGTTAGACAAAGGTTCAATCCACGATTGCCAGAAGATTATTTTGGAAATGCGATTATAGGTTGTGGGGTTAAAATGAAAGCGGGGGATTTATTGAAGGAAGGTGGGCTTGGTAAAGGTGCTTGGGAGATGAACAAGTTGATTGCTTCACACTCTAATGAGAAATTAAAGAATCATTATGAGTCTTGGTTGAAAAATCCAAGCTTTATTACATCTTCTAGCATGATCAATAAAGATTTCTTGGCCACAAGCAGTTCTCCATGGTTTAATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTGTGGCAGTTCGAAGTGGCAATAATAACATAAATGGATTTGTTAGTGCATTTTCTGGAATAGAAGAAGGTAGTATCAATCTTCAAGTGTGTCTTCCTTACAAAATTTTGGAGGCAATGGGAAATGACCCTGAGTTCATGGAGGTTGTATCCAACTAA 1335 0.3783 MGAFQVLSANTIKSLKSSNQKIDLTPWDLQFLLASTNKRGLLYHHPVASDQIQRLRHSLTSALSIFQPLAGRLKITEHKDNTVSCSVTCNNAGVTFIHAASKNTYVADILESTYVPSVVRSFFSFIGVRNYEGTSKPLLAVQVTELDDGIFIGCTFNHVVGDGNATWNFINSWAEISRGCCHHQISKPPTLERWFPNGIQRPIRFPFTTEPQKNYSDRLSFPSSDNEKLCLSERIFRFTKKNIEQLKSKVNTEINGTIKISSLQAVLTHLWRSVIRSKHLDPQEEVYNMFVIGVRQRFNPRLPEDYFGNAIIGCGVKMKAGDLLKEGGLGKGAWEMNKLIASHSNEKLKNHYESWLKNPSFITSSSMINKDFLATSSSPWFNVYGNDFGWGKPVAVRSGNNNINGFVSAFSGIEEGSINLQVCLPYKILEAMGNDPEFMEVVSN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00603 444 Gene3D - 4 203 IPR023213 -
Tsu06g00603 444 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 6 442 - -
Tsu06g00603 444 Pfam Transferase family 11 439 - -
Tsu06g00603 444 Gene3D - 212 433 IPR023213 -
Tsu06g00603 444 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00603 Tsu-Chr6 5205943 5207277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00603 53 424 Monolignol Biosynthesis Gene Families AT5G48930 26.546 1.26e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00603 - - mtr:MTR_4g022760 576.63