Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00595 ATGGCTGACGGTTTATTGTTTAACGCGATTGAGAAGCTGATCGGGATGCTGGGTTCTGCCGTTGTTGAAAGCTGGAACATGAGAGATGATCTTGAAAAGCTGAAGGACAACTTGTCTGAGATCAAGGCTGTAGTTTTGGATGCCGAGGTGCAGCAAAGCACCAACAACAATCAAGTTCAACTTTGGTTGGAAAAGCTCAAAGATGCTCTTGATGATGCTGATGACTTGCTTGATGACTTCAACACTGAAGAGTTAAGGCGACAGCTGATGACCAATGACAAGAAGGCTAAAAAGGTTCGCATCTTCTTCTCGTCTTCTAACCAACTGTTCTTTTCATTCAAAATGGCTGGGAAAATTAAGGAACTTGGTAAGAGAATTGAGGCCCTTAATGTTGATaaaagaatttttaattttacaaatcGCACTCCTGAGCGACGAGTTTTGAAAGAAAGAGATACTCATTCGTTTGTTCCTGACGAAGAAGTCATTGGAAGAGAGGAGGAGAAGAAAGAGTTCCTAGAGTTGTTGTTTAACACCAGCATCAATGTGGAAGAGAATGTTTCAGTTATTTCAATAATTGGAGTTGGAGGACTTGGAAAGACTACGCTTGCTCAATTTGTATACGGTGACAAACAAGTGCAACAACATTTTGAGTTGAAGAAATGGGTGTGTGTTTCTGATGAGTTCGATGTAAAAGGTATTGCTGCAAAGATCATCGATTCAAACACTAATAATGTTGAGATGGATAAAGTGCAGCTGGAACTTCGCAAAAAAGTTGAGGGCAAGAGATATCTGCTTGTCTTGGATGACATTTGGAATGAGGATCGTGATCTTTGGCTTCAATTGATGAGACTACTGAAAGATGGAGCAAAAGGaagtaaaataataatcacCACAAGAAGTGAGAAGGTAGCTAAGATAAGTGGTTCATCTTCAATATCCCCTTTAAAGGGTCTCGATGAAAAACAGTCTTGGAGATTATTCAGTCAATTAGCTTTTAAGAATGAAAAAGAACTGGAGAATGAGAATTTGGTGTCAACTGGTAAGGAAATTGTGAAAAAATGCTCAGGGGTTCCTCTTGCCATTAGAATAATTGGAAGCCTAATGTTTTCCATGGAGGATTGGTCAACATTCAAGAACATTGATCTTTCAAAAATTGATGAACAAGGTGGCAATAAAATTTTTCAACTTATCAAACTAAGTTATGATCACCTACCCATTCATTTGAAaaagtgttttgctttttgttctttgtttcCAAAAGATTTTAGAATTGAGAAGGAAATGTTGATTCGACTTTGGATTGCAGAAGGATTTATTCAGTCATCAGATGAAAATACAACTTTAGAAGATATTGGTGAAAAGTACTTCATGGATTTTGTTCATAAGTctttctttcaaaatatcacCAGATTTCATGACATCGTATTTTTCCAAATGCATGATATTGTGCATGATCTGGCAATTTTCATTTCAAGAAAGGACTTTGTTTTAGTTGACGAAAAGAGGCAGCATTTTGACGAACAAACTCGTCATGTCTCTTTTGGCTTTCTATTGGATTCTTCCTGGCAAATTCCAATTTCTCTTCTCAATGCTCAGAAAGTAAGGACGTTTCTATTACCAAAAAATGATATGTTCTTTTTTGAATATAAAGCATCAATGGAAGTGTCTACTTGTAATTCCATCTTGTCAAGTTTGAGACGATTTCGTGTGCTGGATCTTAAACAGATAAAGTCAAACAAGATTCCATCTTGTATTGGTAGGATGAAACATCTAAGATATCTTTCCCTTTCATATTGTGATAAAGTTGAAGAGCTCCCAAGGTCTATAACCgaattaattaatttggagACTCTTTTACTCAATCATTGTTCTAGCTTGAGAGAGTTGCCCAAAGATCTTTGGAAGTTGGTAAGTCTTCGACATCTTGAGTTGTATGGTTGCAAAAGCTTAACTTGTATGCCGCGTGGAATAGGAAAAATGACTAATCTTCAAACACTGACACAATTTGTGTTAGATACAACTTCTAAAGACAATGCTAAAGCTATTGAACTCAGCGGATTAAATAATTTGAGAGGAGAACTAGAGATAAAAGGCTTGGCATGCTTGAGGCATTGTCCTACAGAAGCTAAACACATCAATTTAATGGGAAAGCCACATCTTCATTCGTTAACATTAAATTGGAAAGAACCAATTGTTGATGATGTCAATGACTTGGAAAAAGATGATGTAATTCTACGCGACATAGCCTTAGACATAATTGGATTTGGTGGTGTGGCAATGTCTAGTTTGGTCAATTTATCTACAAATTTGGATGAATTGAGAGTATCCGTTTGCACAAGATTGCAATATCTCGAACTCCCACCGTTGCATGTCAAACTCATCTTCATGTTTGATTTACCTTCCCTTGAGTGGGTAGTGAACGACAGCAACAATGGTGATAATTCATCAACATTTTGTGCATCACTCACAGAGATAGTTCTTTATGAATTACCTAATCTTAAAGGATGGTGTAGGTGTAGTGAAGAAGAAATGTCTAAGGGTTGTTGTCATCAGTTTAAGAGTCTTGAAGAGTTACGGATTCAGTTTTGTTATAATCTAATTTCCATTCCACAGCACATAGATATCAAGAAAATAGATCTTAGGAATGTCACAGAAAAGATATTACAACAAGCAGTAACTCATTCCAAAGTGGAGTTTCTTGACatatgtaatgtaattaattttaaatctcTAAGTGGAGTCCTTCAACATCTCACCAGAGTGTGTGAATTGAGTATCCGGAATTGCGAGGAATTTGATCCGTGCAATGATGAAGATGGTTGTTACagcatgaaatggaaagaactCACAAACCTCAAAGTGTTGACTTTTGAAAGAATcccaaaaatgaaatatttgccTGAGGGGCTTCAGCACATTACCACTTTACAAACTCTAAGAATCGTGAAATGTGACAACCTTACATCTATACCTGAATGGGTATCATCACTGCAAGTGTTAGATATCAAAGATTGCCCAAAGTGTTCAATAGATATGATTTAA 3045 0.3517 MADGLLFNAIEKLIGMLGSAVVESWNMRDDLEKLKDNLSEIKAVVLDAEVQQSTNNNQVQLWLEKLKDALDDADDLLDDFNTEELRRQLMTNDKKAKKVRIFFSSSNQLFFSFKMAGKIKELGKRIEALNVDKRIFNFTNRTPERRVLKERDTHSFVPDEEVIGREEEKKEFLELLFNTSINVEENVSVISIIGVGGLGKTTLAQFVYGDKQVQQHFELKKWVCVSDEFDVKGIAAKIIDSNTNNVEMDKVQLELRKKVEGKRYLLVLDDIWNEDRDLWLQLMRLLKDGAKGSKIIITTRSEKVAKISGSSSISPLKGLDEKQSWRLFSQLAFKNEKELENENLVSTGKEIVKKCSGVPLAIRIIGSLMFSMEDWSTFKNIDLSKIDEQGGNKIFQLIKLSYDHLPIHLKKCFAFCSLFPKDFRIEKEMLIRLWIAEGFIQSSDENTTLEDIGEKYFMDFVHKSFFQNITRFHDIVFFQMHDIVHDLAIFISRKDFVLVDEKRQHFDEQTRHVSFGFLLDSSWQIPISLLNAQKVRTFLLPKNDMFFFEYKASMEVSTCNSILSSLRRFRVLDLKQIKSNKIPSCIGRMKHLRYLSLSYCDKVEELPRSITELINLETLLLNHCSSLRELPKDLWKLVSLRHLELYGCKSLTCMPRGIGKMTNLQTLTQFVLDTTSKDNAKAIELSGLNNLRGELEIKGLACLRHCPTEAKHINLMGKPHLHSLTLNWKEPIVDDVNDLEKDDVILRDIALDIIGFGGVAMSSLVNLSTNLDELRVSVCTRLQYLELPPLHVKLIFMFDLPSLEWVVNDSNNGDNSSTFCASLTEIVLYELPNLKGWCRCSEEEMSKGCCHQFKSLEELRIQFCYNLISIPQHIDIKKIDLRNVTEKILQQAVTHSKVEFLDICNVINFKSLSGVLQHLTRVCELSIRNCEEFDPCNDEDGCYSMKWKELTNLKVLTFERIPKMKYLPEGLQHITTLQTLRIVKCDNLTSIPEWVSSLQVLDIKDCPKCSIDMI 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00595 1014 Pfam NB-ARC domain 185 403 IPR002182 GO:0043531
Tsu06g00595 1014 Gene3D - 7 119 - -
Tsu06g00595 1014 PRINTS Disease resistance protein signature 355 369 - -
Tsu06g00595 1014 PRINTS Disease resistance protein signature 258 272 - -
Tsu06g00595 1014 PRINTS Disease resistance protein signature 611 627 - -
Tsu06g00595 1014 PRINTS Disease resistance protein signature 189 204 - -
Tsu06g00595 1014 Gene3D Ribonuclease Inhibitor 872 1011 IPR032675 -
Tsu06g00595 1014 Gene3D Ribonuclease Inhibitor 519 671 IPR032675 -
Tsu06g00595 1014 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1009 IPR044974 GO:0006952
Tsu06g00595 1014 Gene3D - 402 489 IPR036388 -
Tsu06g00595 1014 Coils Coil 63 83 - -
Tsu06g00595 1014 SUPERFAMILY L domain-like 479 1007 - -
Tsu06g00595 1014 Coils Coil 31 51 - -
Tsu06g00595 1014 Pfam Rx N-terminal domain 8 96 IPR041118 -
Tsu06g00595 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 416 IPR027417 -
Tsu06g00595 1014 Gene3D - 318 401 IPR042197 -
Tsu06g00595 1014 PANTHER OS08G0543100 PROTEIN 20 1009 - -
Tsu06g00595 1014 Gene3D - 145 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00595 Tsu-Chr6 5130497 5140754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00595 186 785 WRKY Transcription Factor Family AT5G45050 22.879 6.68e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00595 - - mtr:MTR_4g022560 1352.81