Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00547 ATGTCTTCCTTCACTTCCTGCTTCTATAGATGCACCAAATTTCAACCTATATCTACTACTACTAACATGAAGAAGTACGATGTGTACTTGAGTTTCTGCGACAAAGACCCTGATTCTTTTGTTCTGGGTATCTACAAGGGCCTTAATTCTTCTTCAGGAAGTGGAATTAATGTTTTCTGGGACAATAACAGGATTAGAAGAGGAGATCGAGAAATACCAACCTCGGTGTTGAATGTAATTCAAGATTCCAAACTTGTTGTAATTGTATTTTCAACAAATTATTTCAAATCAAGATGGTGTCTTCAAGAATTGGAAAAAATAACTCAGTGTTGCCGAACCACAGATAGTCATAGTTGTTTTATGCTTCTAACTTTCTTTGGTGTCCATCTCATGATAAGAAGTTGGAAGagtaatttttttgaagaagaggCTTTTCATGAATTTCTTGATAGAATCTATAAAGAAGAAACCACCTCCCAACAGAAGAGGGATAAGTTAATGAGTTGGGTGGCAACCATCAGTCATAATAAAGCTATCACATATGCTGCAGGATCACCAGATCTAGAACACGTCTTCACATacagGACGGAAAGTGAACGTATTGAGAATGTAGTTGAACTTGCTACTCGTTTGATAACAGGGAAGAGAGACATGTTCAATGCTTTGTACACAGAGAGCTTAAACTCTCGTGTGCAAGATATGATTCAACTATTGAAACAATCAAAATCTCCTCTCATACTTGGGATATGGGGGATGCCAGGGATTGGTAAAACAACCATTGCCAAAGCCGTTTATGGTCAGGTTGGTTCCTATTTTATGCACAAGTGCTTGATTGAAAATGTCAATAGATCAGTTAAGGATAAAGCTCACACTCTAGTTTCTTTACAAGAGAAAATTATTGTTGGTATGACCAATGGACCTGAAATAAATATATCTACAATTGAGTCAGGGAAAGTGATTTTAGAAGAAAAACTTCGAAGTAAAAGGGTGCTTCTTGTACTTGACGATGTTGATAATTTGGAGCAGCTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAAGGGATAGGCAACTACTAAAGGAGCATGGCGCTGACCATATATACAGAGTAAAAGAACTCGACGAAAATGAATCACTTGAGCTTTTTAATTGGAAAGCGTTCAGCCAAGCAACTTCTCAAGAAGGTTTTGCTGAACTTTCCAGACAGGTAGTTGCTTATGCCGGGGGGTTGCCTCTTGCTCTTACAGACCTTGAGAACCACTTTCATTCGAAAGCAGTAGATATCTGGGAGTCTAAGTTGCATGACTTCAGAAGGCGTTTCTATAATGGTGTACAAGGAACTctagaaaatagttttaatgATTTAAATGATGAAGAGAAACAATTATTCTTTCATATAGCATATTTCTATATCGGGATAAACCAACATGATGTACTCCAATCTTTAAACAGTTCAACACATTGTACAAATCTTCTAATAAGTCTCCTTGAAGACAAAAGCTTTGTAACCATTGATGAGAATAACAAGATTCAAATGCATGTTTTGCTACAAGCTACAGCAGAAGCTATCATTACAAGGGAATCAAGTAACAAAACGGATCAGCCAAAGATGTATGATGTGTTCTTGAGTTTCCGGGGGGAGGATAGTCGTGCAAAGTTCATGTCACATCTGCATTCCTCTCTTCAAAATGCGGGGATTGATACTTTCAGAGATGATGACGAGATTCAACGAGGAGATCAAATCTCAATATCACTGTTGAAAGCAATTGGACAGTCTAGAATCTCTATtgttgttttgtcaaaaaattatgCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATAATGGAAATTGGCAGAACCAAGGGGCTGGTGGTTGTACCGGTGTTCTATGAGGTGGATCCCTCAGATGTACGTCATCAGAAAGGTCAGTTTGGGAAAGGTTTTGATGATCTTGTATCAAAAACCTCGGTGCATGAATCAACAAAGAGTCATTGGCAAAGAGATCTCTATGAAATTTGTGGCATTGCAGGGTTTGTCCTCATAGATTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTTGAACATGTCACTCGTTTGCTAGATAAGACACAGTTATTCGTTGCTGAACATCCAGTGGGTGTAGAATCTCGTGTGGAAGCTGTGACTAAGCTACTAAACATCGAAAAATCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTATGGGTAAAACAACCATTGCCAAATCCATTTACAACAAAGTTGGGAGAAAATTTGAGGGAAGGAGCTTTCTTCTGGGTATAAGGGAATTTTGGGAGACACATACTAATCGAGTTTCACTACAGCAACAGGTACTTTGTGATGTTTACAAAACAACAGTGTTGAAGATACGAGACATCGAATCAgggaaaaatatattgaaggaAAAACTTTCCAAGAATAGGGTGCTTTTTGTGCTTGATGATGTGGATGAATTGGACCAAATAAAGGCTTTGTGTGGAAGCCGTGAATGGTTTGGTACGGGAAGTAGAATAATCATCACAACAAGAGATATGGATCTTCTTAGATCATGTGGAGTTGATCAATTGTATACAATAGAAGAAATGGACGAAAGTGAATCTCTTGAGCTTTTCAGCTGGCATGCATTCAAGCAACCAAGTCCGACAGAGGATTATGCTACACATTCAGCAGATGTTATTGCTTATTCGGGGAAATTGCCACTAGCACTTGAAGTTCTTGGGTCCTATTTGTCTAATTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAAAAACTCAAATGTATTCCCCATGATGAAGTACAGAAGAAGCTAAAAGTAAGCTTCGATGGTTTAAAAGATTTTACAGAGAAACAAATATTCCTTGATATAGCTTCTTTCTTTATTGGGATGGACAAAAATGAtgtaattgaaatattaaatggGTGTGGGTTTTTTGCTGATATTGGAATTAAAGTCCTTGTTGAGCGAGCCCTTTTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCATCAGATCCTGAGATGCGCAGTAGGGTGTGGCGCTGTGATGAAGTGCTTGATATATTATCAAAGGATAAGGGAACAAAAGCTGTCAAGGGACTGTCTTTGGAGTTTCCAAAAAAAGGTTGTTTGGAAACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCGCCTCGCTGGAGTGAAGCTTGAGGGAGATTTTAAATACCTTTCAGGAGATCTTAGGTGGCTATACTGGCATGGATTTCCAGAAACCTACACTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCCATTGAATTAAAATATAGTAAGCTCAAACAAATTTGGAACAAGAGCCAGATGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCTGGATTTGACTGAAACCCCAGATTTTACATACTTGCCAAATCTTGAAAAGCTAGTGCTCAAAAACTGTCCAAGTTTGTCTAAGATCTCCCATACCATTGGATCTCTACATAAACTTCTTCTGATAAATTTGACAGACTGCACAGGTCTTCAGACACTTCCGAGAAGCATTTATAAGTTAAAGTCTCTAGAAACTTTGATTCTTTCAGGATGCTCCAAGATTGACAAATTGGAGGAGGATTTGGAACAGATGGAATCATTGATTACCTTGATTGCAGATAAGACTGGTATAACAAAAGTGCCATTTTCAATAGTAAGATTGAAAAGCATCGGATATATTTCTTTAAGTGGCTTTGAAGGATTTTCTCGTAATGTTTTCCCTTCTCTCATTCGGTCTTGGATGTCGCCATCAAATAATGTGATATCCCTAGTTCAATCATCAGTGTCCATGTCATCACTTGGTAGTTCGAAAGACCTTCAAAAACTTCGAATTCTTTGTGCGAAGTGTGATTCAGATTTACATCTAACTCAAGATATAGCAAGATTTTTGGATGTATTAAAAGCCACAAATTGTCAGAACTTGGAAGCAAGTGTAAGTTCAACTTCATCAGAGATTTCTGATATGCATGCTTCTCCCTTAATTGGTGATTGCCTTGGTCATGTTCCCACTTCAGGGTCAAATAATCACTTGAAATCTCTCTTAATTCAAATGGGAACAAAATGCCAAATCTCTAATGTTGCTGAAGACAGTGTTTTACAGATTGCAGATGGGACTTGGGATTTATTTTTGCTCGGCTGTGACAATAAATCTGATTGGTTAACTTTCAATTGCAAAGGTTGTTCGATAATATTTGATGTCCCAACAATGAAGGGGAGTAATCTGAAGAGTATGATGTTGTACATTGTCTATTACTCTTGCTCGGAAAAAATAACATCAGAAGGTTGTCAAGGTATGTTAATCATAAATTACACAAAGACAACCATTCATGCATATAAAAGAGATACACTAACCTCCTTTGAGGATGAGGATTGGCAGAGCATAACCTCAAATCTAGAACCTGGTAACAAAGTGGGAGTTATGGTTGTTTTTGGGGAGGGTTTCATTGTTGATAAGACTACAGTATCTCTCTTATATGATGAACCACTCGACAAAGAAATGGAACACTGTCATGTAGTAGACGAGGAGGATGTTATTGTTTCTGGCAATGACGGTAATAACGTTAGTGGTTCTGGTGGTGACAATGAAGTCATCAATCAATTTAGAGAAGAAACGGTGAACCACATGCAGATCACCATGTATGCTGGTGGGTTATATGCTGATGCTGTGGGACCATTACAACTAGTACAACATGACCCTCACCAGCCTGAAGAGGCAGTAACTGAGGAGATTCCTGCAGCTGAAGCATATGGTGATCAGGAGCAACAGGTTCCTCCACCTGAGGGTCAACCTGAGCAGCAGGCAACAGCTACACCTGAGGCCATTGGGTCGTCCTTAGGAGCTCAGATTTTGGATGCCTTTAGAGAGCTGAGGGCTGATTTCTTCCAACTAGAGCAGACTGTTACTGCTAGGTTTAATGCAGTAGAGGTAAGATTAGAGGTGCTTGAGGATGCCATTGCCCAGATACCACGTGGGTCGAATTCTGAGTCCACCAAATAA 5157 0.3808 MSSFTSCFYRCTKFQPISTTTNMKKYDVYLSFCDKDPDSFVLGIYKGLNSSSGSGINVFWDNNRIRRGDREIPTSVLNVIQDSKLVVIVFSTNYFKSRWCLQELEKITQCCRTTDSHSCFMLLTFFGVHLMIRSWKSNFFEEEAFHEFLDRIYKEETTSQQKRDKLMSWVATISHNKAITYAAGSPDLEHVFTYRTESERIENVVELATRLITGKRDMFNALYTESLNSRVQDMIQLLKQSKSPLILGIWGMPGIGKTTIAKAVYGQVGSYFMHKCLIENVNRSVKDKAHTLVSLQEKIIVGMTNGPEINISTIESGKVILEEKLRSKRVLLVLDDVDNLEQLNALCGSREWFGEGSKIIITTRDRQLLKEHGADHIYRVKELDENESLELFNWKAFSQATSQEGFAELSRQVVAYAGGLPLALTDLENHFHSKAVDIWESKLHDFRRRFYNGVQGTLENSFNDLNDEEKQLFFHIAYFYIGINQHDVLQSLNSSTHCTNLLISLLEDKSFVTIDENNKIQMHVLLQATAEAIITRESSNKTDQPKMYDVFLSFRGEDSRAKFMSHLHSSLQNAGIDTFRDDDEIQRGDQISISLLKAIGQSRISIVVLSKNYANSRWCMLELEKIMEIGRTKGLVVVPVFYEVDPSDVRHQKGQFGKGFDDLVSKTSVHESTKSHWQRDLYEICGIAGFVLIDSRNESADIKNIVEHVTRLLDKTQLFVAEHPVGVESRVEAVTKLLNIEKSEDVLLLGIWGMGGMGKTTIAKSIYNKVGRKFEGRSFLLGIREFWETHTNRVSLQQQVLCDVYKTTVLKIRDIESGKNILKEKLSKNRVLFVLDDVDELDQIKALCGSREWFGTGSRIIITTRDMDLLRSCGVDQLYTIEEMDESESLELFSWHAFKQPSPTEDYATHSADVIAYSGKLPLALEVLGSYLSNCEITEWQKVLEKLKCIPHDEVQKKLKVSFDGLKDFTEKQIFLDIASFFIGMDKNDVIEILNGCGFFADIGIKVLVERALLTVDNRNKLRMHDLLRDMGRQIIYEESPSDPEMRSRVWRCDEVLDILSKDKGTKAVKGLSLEFPKKGCLETKAFKKMNKLRLLRLAGVKLEGDFKYLSGDLRWLYWHGFPETYTPAEFQQGSLVAIELKYSKLKQIWNKSQMLENLKILNLSHSLDLTETPDFTYLPNLEKLVLKNCPSLSKISHTIGSLHKLLLINLTDCTGLQTLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLITLIADKTGITKVPFSIVRLKSIGYISLSGFEGFSRNVFPSLIRSWMSPSNNVISLVQSSVSMSSLGSSKDLQKLRILCAKCDSDLHLTQDIARFLDVLKATNCQNLEASVSSTSSEISDMHASPLIGDCLGHVPTSGSNNHLKSLLIQMGTKCQISNVAEDSVLQIADGTWDLFLLGCDNKSDWLTFNCKGCSIIFDVPTMKGSNLKSMMLYIVYYSCSEKITSEGCQGMLIINYTKTTIHAYKRDTLTSFEDEDWQSITSNLEPGNKVGVMVVFGEGFIVDKTTVSLLYDEPLDKEMEHCHVVDEEDVIVSGNDGNNVSGSGGDNEVINQFREETVNHMQITMYAGGLYADAVGPLQLVQHDPHQPEEAVTEEIPAAEAYGDQEQQVPPPEGQPEQQATATPEAIGSSLGAQILDAFRELRADFFQLEQTVTARFNAVEVRLEVLEDAIAQIPRGSNSESTK 1718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00547 1718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 475 IPR027417 -
Tsu06g00547 1718 SUPERFAMILY L domain-like 1023 1352 - -
Tsu06g00547 1718 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 119 IPR035897 -
Tsu06g00547 1718 Gene3D - 216 376 IPR027417 -
Tsu06g00547 1718 Gene3D - 711 877 IPR027417 -
Tsu06g00547 1718 Gene3D - 20 215 IPR035897 -
Tsu06g00547 1718 Gene3D Ribonuclease Inhibitor 1055 1363 IPR032675 -
Tsu06g00547 1718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 556 1545 IPR044974 GO:0006952
Tsu06g00547 1718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 541 IPR044974 GO:0006952
Tsu06g00547 1718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 711 978 IPR027417 -
Tsu06g00547 1718 SMART AAA_5 745 882 IPR003593 -
Tsu06g00547 1718 SMART AAA_5 243 383 IPR003593 -
Tsu06g00547 1718 PRINTS Disease resistance protein signature 748 763 - -
Tsu06g00547 1718 PRINTS Disease resistance protein signature 825 839 - -
Tsu06g00547 1718 PRINTS Disease resistance protein signature 1225 1241 - -
Tsu06g00547 1718 PRINTS Disease resistance protein signature 918 932 - -
Tsu06g00547 1718 Coils Coil 1241 1261 - -
Tsu06g00547 1718 ProSiteProfiles TIR domain profile. 24 156 IPR000157 GO:0007165
Tsu06g00547 1718 SMART till_3 25 173 IPR000157 GO:0007165
Tsu06g00547 1718 SMART till_3 547 687 IPR000157 GO:0007165
Tsu06g00547 1718 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 556 1545 - -
Tsu06g00547 1718 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 52 541 - -
Tsu06g00547 1718 MobiDBLite consensus disorder prediction 1639 1658 - -
Tsu06g00547 1718 SUPERFAMILY "Winged helix" DNA-binding domain 454 538 IPR036390 -
Tsu06g00547 1718 Pfam TIR domain 25 115 IPR000157 GO:0007165
Tsu06g00547 1718 Pfam TIR domain 548 711 IPR000157 GO:0007165
Tsu06g00547 1718 Pfam NB-ARC domain 728 953 IPR002182 GO:0043531
Tsu06g00547 1718 Pfam NB-ARC domain 231 463 IPR002182 GO:0043531
Tsu06g00547 1718 SUPERFAMILY Toll/Interleukin receptor TIR domain 539 663 IPR035897 -
Tsu06g00547 1718 Gene3D - 540 710 IPR035897 -
Tsu06g00547 1718 Gene3D - 382 466 IPR042197 -
Tsu06g00547 1718 Gene3D - 883 967 IPR042197 -
Tsu06g00547 1718 CDD AAA 228 370 - -
Tsu06g00547 1718 ProSiteProfiles TIR domain profile. 546 713 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00547 Tsu-Chr6 4686565 4693252 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00547 163 550 WRKY Transcription Factor Family AT4G12020 27.949 8.90e-35 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00547 - - cam:101511908 2126.29