Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00545 ATGTCTTCccttactactactactaatacAAACAGGAAGAGGTACAACGTGTACCTGAGTTTCTGCGACGAAGATGCACATTCTTTTGTTTCGGATATCTATCATAATCTTAgtagaaattctgaatttgttGTTTTCTGGGACAATGAGAGGATTGGAAGTGGAGATCAAGAAATACCAACCTCGGTGCTTAATGTAATTGGAGAGTGCAAAATTGCTATAATTGTATTTTCCATAAATTATGCTAATTCAAGACGGTGCCTTCAAGAATTGGAGAAAATAACCGAATGTTGTCGAACCTCGGATTTGAATGTTCTTCCTGTGTTCTATGATGGCGTGTATCCCTCGAACGGAAGTTTGAAGAGCGGTATGTTTGGAGAGGCTTTTCATGATTTTGTGGATATAATTAGTAAAGAAGAAGACAAGTTCATGGGTTGGGTGGCAGGGATCAGTAAAGCATACAAATATTCAGGACCAAGATATTTCTTAGTCATAGACATATACagCgaagaaattcaacatattAAGAATGTAGTTGATCGTGTTACTTGTGTGCTAAACAAGAGGATAAACTTATCCAGTGCTTTTTATACAGTGAGTGTAAAATCTAGCGTGCAAGATGTGATTCAACTATTGAAACAATCAAAATGTCCTCTCCTAGTAGGGATATGGGGGATGGCGGGGGTTGGTAAATCAGCCATTGCCGAAGCCATTTATGATCAGATTGCTCCCTATTTTGAGCACAAGTGCTTCCTCAATAAAGTCAGTGTAGTTTGGGAAAAGAATAACGGTCAAGTTCCTTTACAAGAGAAACTTCTTTTTGATGTTGACAAGGCAACTGAAATAAAGATTCCTACAATTGAATCAGGAAAAgtgattttaaaagaaagacTTCGACATAAAAGGGTACTTCTTGTTCTCGATGATGTTAATAAATTGGAGCAGCTAAAGGCTTTGTGCGGAAGTCGTGATTGGTTTGGCGCAGGtagcaaaataataatcacaacAAGAGATAGAAATCTACTCAAGGAGCTTGGAGCTGACTGTATATATAGAGTGAAAGAACTGGACGAAAGTGAATCACTTGAGGTTTTGAACCGGGGTGCGTTCAACCAGGCTATTGCTCCTGAAGATTTTGTTGAACTTTCTAAAGAGGTAGTTGCCTATTCTGGAGGACTGCCACTCGCTCTTCAAAATCTTCGGTCCGTTTTGCATGGAAAAGAAGCACGTCAGTGGAAGAGTCTGTTGAGATGTCTAGAAAGATCATCCATTCCATTTCCACAACTACTTGAAGCTCTAGAAAGGAGTTTTCGTGATTTGAGtgatgaagaaaaacaaatatttcttGATATAGCATATTTCTTTAACGGGATGAACCAAAATGATGTACTCCAAACAATAAATAGACCAACAGAATGTGCAACTCTTCAAATAAGTCTCCTTGAAGACAAGAGCCTGGTAACCATAGATGAGAATAACAAACTTCAAATGAATGTTCTGCTACAAGCCATGGCAAGAGATATCATTAAGAGGGAATCAAGTAATATGACCAATCAGCCAAAGATGTACGATGTGTTCTTGAGTTTTCGAGGGGAAGATAGTCGTGCGAAATTTATTGCCCATTTGTATTCCTCTCTTCAAAATGCAGGGATTTATGCTTTCAGAGACGCTGAGATTCAACGAGGAGATCTTATCTCATTCTCACTGTTGCAAGCAATTGGACGGTCTAGAATTTCTATCGTTGTTTTGTCTGTAAATTATGCCGATTCAAGATGGTGTATGCTAGAGTTGGAGATGATCATGGAAATTGGTAGAACCAGGGGTCTAGTGGTTGTACCGGTCTTCTATGAGGTAGATCCCTCAGAAGTACGTCATCAGGAAGGTCAGTTTGGAAAAGCTTTTGAAGATCTCATATCAACAATCTCAGTGGATGAATCCACAAAGAGTAATTGGAGAAGAGAACTCTTTAATATTGGTGGCACAGCAGGGTTTGTACTCATAGATTCcagGAACGAAAGTGAAGATATCAAGAATATTGTTGAACATGTCGCCCATTTGTTAGACAGGACCGAGTTATTCGTTGCTGAACATCCAGTGGGTGTAGAATCTCGTGTGGAAGCTGTGACTAAGCTACTAGACATCCAAAAAACAGAAGATGTTTTACTACTAGGGATATGGGGAATGGGGGGTATGGGTAAAACAACCATTGCCAAAGCCATTTATAATCAAATTGGGAACAAATTTGAGGGAAGGAGCTTCCTTCTGAACATAAGGGAAGTTTGGGAGACGGATACTAATAAAGTTTCTTTACAGCAACAAGTACTTTATGATGTTTACAAAACAACAGCATTCAAGATACGTGACATCGAATCAgggaaaaatatattgaaggaAAGACTTGCCCAGAAAAAGGTACTTCTTGTGCTTGATGATGTGAATGAATTGGACCAGCTAATGGCTTTGTGTGGAAGCCACGAGTGGTTTGGTCCGGGGAGTAGAATAATAATCACAACAAGAGATATGGATCTTCTTAGATCGTGTAGAGTTGATCGAATGTATACGATAGAAGAAATGAACGAAAGAGAATCTCTTGAGCTATTCAGTTGGCATGCATTCAAGCAACCAAGTCCAATAGAAGATTTTGCTACACATTCAACAGATGTGATTGCTTATTCTGGGAGATTGCCATTAGCACTTCAAGTTCTTGGGTCCTATTTATCTTACTGCGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGGTCAAGTACAAAAGAAGCTAAAAGTAAGCTTCGATGGTTTAAACGATATTACAGAGAAACAAATATTCCTCGATATAGcttgtttttttattggtagGGATCAAAATGATGTAATACGAATACTAAATGGGTGTGGGTTTTTTGCTGATATTGGAATTAAAGTCCTTGTAGAGCGAGCCCTTTTAACTGTTGACAAAAGTAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCATCAGATCCTGAGAAGCGCAGTAGGTTGTGGCGCTGTGATGAAGTGCTAGATATATTATCTAAGGATAAGGGAACAAAATCTGTCAAGGGACTGGCTTTGGAGTTTCCAAAAAACGATTGTTTGGAAACCAAAGCATTTAAGAAGATGAATAAACTCAGATTGCTTCGCCTCGCTGGGGTGAAGCTTGAGGGAGATTTTAAATACCTTTCAGGAGATCTTAGGTGGCTATACTGGCATGGATTTCCAGAAACCTACACTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCCATCGAATTAAAATATAGTAAGCTCAAAAAAGTTTGGAACAAGAGCCAGGTATTTGTCCATGAAAGAATAACATTCAAGTTTAAATTTCTCGACCCAAAAGTACAActtatttataaatatcattTGACAATTTCACATCCTAAGAAAATTAAGTAG 3492 0.3703 MSSLTTTTNTNRKRYNVYLSFCDEDAHSFVSDIYHNLSRNSEFVVFWDNERIGSGDQEIPTSVLNVIGECKIAIIVFSINYANSRRCLQELEKITECCRTSDLNVLPVFYDGVYPSNGSLKSGMFGEAFHDFVDIISKEEDKFMGWVAGISKAYKYSGPRYFLVIDIYSEEIQHIKNVVDRVTCVLNKRINLSSAFYTVSVKSSVQDVIQLLKQSKCPLLVGIWGMAGVGKSAIAEAIYDQIAPYFEHKCFLNKVSVVWEKNNGQVPLQEKLLFDVDKATEIKIPTIESGKVILKERLRHKRVLLVLDDVNKLEQLKALCGSRDWFGAGSKIIITTRDRNLLKELGADCIYRVKELDESESLEVLNRGAFNQAIAPEDFVELSKEVVAYSGGLPLALQNLRSVLHGKEARQWKSLLRCLERSSIPFPQLLEALERSFRDLSDEEKQIFLDIAYFFNGMNQNDVLQTINRPTECATLQISLLEDKSLVTIDENNKLQMNVLLQAMARDIIKRESSNMTNQPKMYDVFLSFRGEDSRAKFIAHLYSSLQNAGIYAFRDAEIQRGDLISFSLLQAIGRSRISIVVLSVNYADSRWCMLELEMIMEIGRTRGLVVVPVFYEVDPSEVRHQEGQFGKAFEDLISTISVDESTKSNWRRELFNIGGTAGFVLIDSRNESEDIKNIVEHVAHLLDRTELFVAEHPVGVESRVEAVTKLLDIQKTEDVLLLGIWGMGGMGKTTIAKAIYNQIGNKFEGRSFLLNIREVWETDTNKVSLQQQVLYDVYKTTAFKIRDIESGKNILKERLAQKKVLLVLDDVNELDQLMALCGSHEWFGPGSRIIITTRDMDLLRSCRVDRMYTIEEMNERESLELFSWHAFKQPSPIEDFATHSTDVIAYSGRLPLALQVLGSYLSYCEITEWQKVLEKLKCIPHGQVQKKLKVSFDGLNDITEKQIFLDIACFFIGRDQNDVIRILNGCGFFADIGIKVLVERALLTVDKSNKLRMHDLLRDMGRQIIYEESPSDPEKRSRLWRCDEVLDILSKDKGTKSVKGLALEFPKNDCLETKAFKKMNKLRLLRLAGVKLEGDFKYLSGDLRWLYWHGFPETYTPAEFQQGSLVAIELKYSKLKKVWNKSQVFVHERITFKFKFLDPKVQLIYKYHLTISHPKKIK 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00545 1163 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 513 IPR044974 GO:0006952
Tsu06g00545 1163 SUPERFAMILY Toll/Interleukin receptor TIR domain 513 655 IPR035897 -
Tsu06g00545 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 686 952 IPR027417 -
Tsu06g00545 1163 SMART AAA_5 217 357 IPR003593 -
Tsu06g00545 1163 SMART AAA_5 719 847 IPR003593 -
Tsu06g00545 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 451 IPR027417 -
Tsu06g00545 1163 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 531 1123 - -
Tsu06g00545 1163 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 23 513 - -
Tsu06g00545 1163 SUPERFAMILY "Winged helix" DNA-binding domain 928 1034 IPR036390 -
Tsu06g00545 1163 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Tsu06g00545 1163 Pfam NB-ARC domain 702 934 IPR002182 GO:0043531
Tsu06g00545 1163 Gene3D - 857 941 IPR042197 -
Tsu06g00545 1163 Gene3D - 355 441 IPR042197 -
Tsu06g00545 1163 ProSiteProfiles TIR domain profile. 13 137 IPR000157 GO:0007165
Tsu06g00545 1163 ProSiteProfiles TIR domain profile. 521 683 IPR000157 GO:0007165
Tsu06g00545 1163 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 531 1123 IPR044974 GO:0006952
Tsu06g00545 1163 SMART till_3 14 160 IPR000157 GO:0007165
Tsu06g00545 1163 SMART till_3 522 661 IPR000157 GO:0007165
Tsu06g00545 1163 Gene3D - 695 854 IPR027417 -
Tsu06g00545 1163 PRINTS Disease resistance protein signature 722 737 - -
Tsu06g00545 1163 PRINTS Disease resistance protein signature 799 813 - -
Tsu06g00545 1163 PRINTS Disease resistance protein signature 892 906 - -
Tsu06g00545 1163 SUPERFAMILY "Winged helix" DNA-binding domain 430 513 IPR036390 -
Tsu06g00545 1163 Pfam TIR domain 523 684 IPR000157 GO:0007165
Tsu06g00545 1163 Pfam TIR domain 15 148 IPR000157 GO:0007165
Tsu06g00545 1163 Gene3D - 185 349 IPR027417 -
Tsu06g00545 1163 Gene3D - 517 694 IPR035897 -
Tsu06g00545 1163 Gene3D - 8 184 IPR035897 -
Tsu06g00545 1163 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 133 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00545 Tsu-Chr6 4654791 4661845 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00545 64 515 WRKY Transcription Factor Family AT4G12020 30.921 2.88e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00545 - - cam:101511908 1853.57