Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00530 ATGGCTATCGTAAATCAACAAGCTCAACACGAAGAATTTGCTccacagaagaagaagaaaccacCTACTGAGGATGAGAAaagGAAGGAGAAAATTGTGGCTGGGAGTTTGATGAAAGCTTTGATGAGACCTGGTGCTGGTGATTCTGGACCTTCCGATGGTGATCAGGTTATCTATCACTGCACAGTTCGAACTTTGGATGGAGTAGTTGTGGAATCTACCCGATCTGAACATGGAGGCAAGGGCATACCGATAAGACATGTATTGGGTAAAAGCAAGATGCTATTGGGCTTGCTAGAAGGAATTCCATCTATGTTGAAGGGTGAAGTGGCAATGTTCAAGGTGAAGCCTCAGTTGCATTATAATGAGGATGATTGTCCTATTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTCCATTTTGAAATTGAGCTGTTAGAGTTTTTCAAGGCCAAGGTTGTCACTGATGATTTGGGAGTGGTTAAAAAGGTTGTACGTGAAGGGCAAGGTTGGGAATGTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCGAAGACAGTTACTGGGAAATTGATCATGTCACACACAGAAGGAGAACCCTATTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATTGGAACAATGGTTCGGGAAGAGAAAGCTGTTATATATGTTACAAGTCAGTATTTAACCGAGTCTCCTCTGATGCCTGTTACAGAAGATTCTGAAGTCCAATTTGAAGTGGAGCTTGTTCACTTTATTCAAGTGCGGGACGTGCTTGGAGATGGACGCCTGATAAAACGTCGGATTCGTGATGGAAAAGGTGATTTTCCAATGGATTGCCCCCTTCACGACAGTCTACTTCATGTTCATTACAAGGGCACTGTTCTTAATGAAGAAAAGAAGGTGTTCTATGACACAAGAGTTGATAACAACGGTCAACCATTGGATTTCTGTTCTGGAGAAGGGCTGGTACCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTATCTTTTGAAATGCCAAAGGTAATTTGA 1176 0.4175 MAIVNQQAQHEEFAPQKKKKPPTEDEKRKEKIVAGSLMKALMRPGAGDSGPSDGDQVIYHCTVRTLDGVVVESTRSEHGGKGIPIRHVLGKSKMLLGLLEGIPSMLKGEVAMFKVKPQLHYNEDDCPISAPDGFPKDDELHFEIELLEFFKAKVVTDDLGVVKKVVREGQGWECPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVTEDSEVQFEVELVHFIQVRDVLGDGRLIKRRIRDGKGDFPMDCPLHDSLLHVHYKGTVLNEEKKVFYDTRVDNNGQPLDFCSGEGLVPEGFELCVRLMLPGEMALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFEMPKVI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00530 391 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 54 150 IPR001179 GO:0003755
Tsu06g00530 391 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 71 389 IPR031135 GO:0030154|GO:0042761|GO:0099402
Tsu06g00530 391 SUPERFAMILY FKBP-like 268 385 - -
Tsu06g00530 391 MobiDBLite consensus disorder prediction 12 31 - -
Tsu06g00530 391 SUPERFAMILY FKBP-like 155 262 - -
Tsu06g00530 391 Gene3D - 153 264 IPR046357 GO:0003755
Tsu06g00530 391 SUPERFAMILY FKBP-like 30 154 - -
Tsu06g00530 391 MobiDBLite consensus disorder prediction 1 31 - -
Tsu06g00530 391 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 178 263 IPR001179 GO:0003755
Tsu06g00530 391 Gene3D - 2 152 IPR046357 GO:0003755
Tsu06g00530 391 Gene3D - 265 388 IPR046357 GO:0003755
Tsu06g00530 391 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 71 389 - -
Tsu06g00530 391 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 295 383 IPR001179 GO:0003755
Tsu06g00530 391 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 180 260 IPR001179 GO:0003755
Tsu06g00530 391 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 147 IPR001179 GO:0003755
Tsu06g00530 391 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 294 386 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00530 Tsu-Chr6 4472638 4479789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00530 274 391 Calmodulin-binding Proteins AT3G25230 31.356 9.52e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00530 - - gsj:114415215 687.182