Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00525 ATGGCCAAAGTTGAAGGAGAAGTTCAATTGTTAGGTGTAGGAGGAAGCCCATTTGCTAGAAGAGTGCAAATTGCTCTAAAATTGAAGGGTATTGAATACACTTACATTGAAGAAAATTTAAGGGACAAAAGTGATCTTCTTCTTAAGTACAACCCTATTCACAAGAAAGTGCCTGTTTTAGTTCACAATGGAAAACCCATAGTTGAGTCTCTTGTGATCCTTGAATACATTGATGAAACATGGGAGAATTATCCTATTTTTCCTCAACAACCTTATGAGAAAGCATTGGCTCGATTTTGGTCTAGGTTCATTGATGACAAGATTCTGCCAGCAATATCAAAGGCTGCATGGACAGTGAACAAAGACGAACGTGAGAAAGGAATTGAAGAATCATTGCAAGCTCTACAATTTCTTGAGAATGAACTCAAGCACAAATTCTTTGGTGGAGAAAATATTAGCATTGTGGACATTGCTGCTTCTTACTTAGCTTTCTGGCTCCCTGTGATTGAAGAAGCTGTAGAATTGAAATTGCTTACTAGTGACAAATTTCCAAAGCTCCATAAATGGAGCCAAGAATTCATCAATCATCCTATTGTGAAAGAGAATCTTCCCCCTAAACAAGGACTCTTGGGATTTTTCAAATCTCGCTATGCGGCGATTAGTGCTACTTCGAAATAA 678 0.3791 MAKVEGEVQLLGVGGSPFARRVQIALKLKGIEYTYIEENLRDKSDLLLKYNPIHKKVPVLVHNGKPIVESLVILEYIDETWENYPIFPQQPYEKALARFWSRFIDDKILPAISKAAWTVNKDEREKGIEESLQALQFLENELKHKFFGGENISIVDIAASYLAFWLPVIEEAVELKLLTSDKFPKLHKWSQEFINHPIVKENLPPKQGLLGFFKSRYAAISATSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00525 225 CDD GST_N_Tau 8 81 - -
Tsu06g00525 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Tsu06g00525 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Tsu06g00525 225 Pfam Glutathione S-transferase, C-terminal domain 104 197 IPR004046 -
Tsu06g00525 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Tsu06g00525 225 Gene3D Glutaredoxin 1 89 - -
Tsu06g00525 225 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Tsu06g00525 225 Gene3D - 90 224 - -
Tsu06g00525 225 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 220 - -
Tsu06g00525 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Tsu06g00525 225 SFLD Glutathione Transferase (cytosolic) 5 223 IPR040079 -
Tsu06g00525 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Tsu06g00525 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Tsu06g00525 225 Coils Coil 121 141 - -
Tsu06g00525 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00525 Tsu-Chr6 4416804 4419148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00525 5 223 Glutathione S-transferase Gene Family AT3G09270 49.550 1.03e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00525 K00799 - gmx:100819805 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00525 06 4416804 4419148 Tsu06g00525 06 4416804 4419148 ECH