Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00524 atggctCCTGCaaatcaagaagaagaagtgagACTATTAGGAAAATGGCCAAGTCCATTTAGCAACAGAATAGTTCTTGCTTTAAAACTCAAAGGTGTTTCATACAAATACTCAGAAGAAAATCTAGCTAATAAAAGTGATGATCTTCTTAAATACAACCCTGTTTATAAGAAAGTACCTGTTCTTGTTCACAATGGAAATCCAATTGCTGAGTCTCTTGTCATTCTTGAATACATAGATGAGACATGGAcaaataattcttttttgtcTCAAGATCCTTATGAGAGAGCTTTGGCTCGGTTTTGGTCTAAGACTCTTGATGACAAGATTTTGCCTGCAATATGGAATGCATGCTGGAGCGACGAAAAAGGGCGCGAGAAAGCTGTGGAGGAAGCCTTAGAAGCTCTAAACATACTAGAGAATGAAATCAAAGACAAGAAATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTACTGCAAATTTCATTGGTTATTGGGTTGAAATATTACAAGAAATTGCAGGGTTGGAATTACTTACCATTGAAAAATTTCCAAAGGTATTTAAATGGAGTCAAGAATTTATCAATCACCCTGTTATCAAGGAAGGGTTACCTCCTAGAGATGAATTACTTGCTTTTTTCAAAGCTTCTGCTTCAAAAAAGTAG 669 0.3378 MAPANQEEEVRLLGKWPSPFSNRIVLALKLKGVSYKYSEENLANKSDDLLKYNPVYKKVPVLVHNGNPIAESLVILEYIDETWTNNSFLSQDPYERALARFWSKTLDDKILPAIWNACWSDEKGREKAVEEALEALNILENEIKDKKFFGGETIGLVDITANFIGYWVEILQEIAGLELLTIEKFPKVFKWSQEFINHPVIKEGLPPRDELLAFFKASASKK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00524 222 SFLD Main (cytGST) 6 220 - -
Tsu06g00524 222 Coils Coil 122 142 - -
Tsu06g00524 222 SUPERFAMILY GST C-terminal domain-like 81 219 IPR036282 -
Tsu06g00524 222 Gene3D - 92 222 - -
Tsu06g00524 222 SFLD Main.3: Omega- and Tau-like 6 220 IPR045073 -
Tsu06g00524 222 CDD GST_N_Tau 10 83 - -
Tsu06g00524 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 218 - -
Tsu06g00524 222 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Tsu06g00524 222 Gene3D Glutaredoxin 3 90 - -
Tsu06g00524 222 Pfam Glutathione S-transferase, C-terminal domain 106 199 IPR004046 -
Tsu06g00524 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Tsu06g00524 222 SUPERFAMILY Thioredoxin-like 10 110 IPR036249 -
Tsu06g00524 222 Pfam Glutathione S-transferase, N-terminal domain 9 81 IPR004045 -
Tsu06g00524 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 222 IPR010987 -
Tsu06g00524 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 218 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00524 Tsu-Chr6 4413735 4415899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00524 5 217 Glutathione S-transferase Gene Family AT3G09270 58.140 6.80e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00524 K00799 - gmx:547582 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00524 06 4413735 4415899 Tsu06g00524 06 4413735 4415899 ECH