Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00520 ATGGCTGCTACACTCTATAATCTTAAATCTGAAGCTGGGTTGAAGAAACTTGATGAATACCTTCTCACCCGCAGTTATATTTCAGGGTACCAAGCTTCAAAAGATGACATCACTGTTTATGCAGCTTTGCCATCAGTTCCATCAAGTGAATTTGTGAATGTGGCTAGGTGGTACAAGCATATCGATGCTTTGTTGAGGATTTCTGGTGTTTCTGGTGAGGGATCCGGTGTCACTGTGGAATCTTCTCTAGTCGTTGAAGAGGCTGTTGCCACTCCTCCAGCTGCTGACACAAAGGCCGCTGAAGcagaggatgatgatgatgacgatgtGGATTTGTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCAGCCGTGAAGGCATCCGGCAAAAAGAAAGAGAGTGGGAAATCATCTGTCTTGTTGGATGTGAAGCCATGGGACGATGAAACCGACATGAAGAAGCTTGAAGAAGCAGTGAGATCTGTTAAGTTGGATGGGTTGTTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTGCAAATTATGCTTACTATCGTGGATGATTTGGTTTCCGTTGACAATATGGTCGAGGATTATCTTACTGTTGAGCCCATCAATGAGTATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATTTAA 696 0.4296 MAATLYNLKSEAGLKKLDEYLLTRSYISGYQASKDDITVYAALPSVPSSEFVNVARWYKHIDALLRISGVSGEGSGVTVESSLVVEEAVATPPAADTKAAEAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVKLDGLFWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNMVEDYLTVEPINEYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00520 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 231 - -
Tsu06g00520 231 Coils Coil 114 134 - -
Tsu06g00520 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Tsu06g00520 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Tsu06g00520 231 MobiDBLite consensus disorder prediction 90 110 - -
Tsu06g00520 231 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 231 - -
Tsu06g00520 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Tsu06g00520 231 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Tsu06g00520 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Tsu06g00520 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Tsu06g00520 231 Gene3D - 2 79 - -
Tsu06g00520 231 Gene3D - 135 231 IPR014717 -
Tsu06g00520 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00520 Tsu-Chr6 4368324 4371110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00520 3 231 Eukaryotic Initiation Factors Gene Family AT2G18110 80.870 3.21e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00520 K03232 - gmx:100777627 294.278