Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00513 ATGGCGCAAGGAACGGGACGGAGTAGTAGAATTGTTGGAGATTATGTAGTTGGGAAGCAAATTGGAGCAGGTTCGTTTTCAGTTGTATGGCATGCGAGACACAAAGTTCATGGAACAGAAGTTGCTATTAAAGAAATTGCTACTCTTAGACTTAATAAGAAGTTGCAAGAGAGTCTTATGTCTGAGATTTTCATTTTGAAGCGTATTAATCATCCTAATATTATCTCTTTGCATGATATTATTCAgGCTCCTGGGAAGATACATCTTGTGTTGGAGTACTGTAAAGGGGGAGATCTTTCTTTGTACATTCAACGTCATGGAAGGGTACCGGAGGCAACTGCCAAGCATTTTATGCTTCAGCTGGCTGCTGGTCTGCAAGTTCTTCGGGACAATAACCTTATTCATCGAGATCTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGGCAGTTCTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAGCCTAGGGGCCTTGCAGAAACATTATGTGGTTCGCCGCTCTACATGGCTCCAGAAATCATGCAACTGCAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCTATCTTATATCAGTTTGTTACAGGAAAAACACCTTTCACTGGAAACAATCAAATCCAGTTACTACAGAATATTATGAAATCAACAGAATTGCAATTTCCATCTGATAGCCAAAGTTTGAGTTCTGAGTGCAAAGATTTGTGTCAGAAATTACTACGCCGTAACCCAgTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTAATCCAAAGCAAACAGAACAGGATGAACCATTAAGGAATAAAAGCTCTTCAAGGCTGGTAGGTGGGTTCTCTACAACAGTGACTGACCCTTTGAGAAGAACCGAGGAAAATTATCACGAGGATTGCTTACCTTTCATTCTAGATGATGATTCCAGTGGACCTGAAAGTACATTGTTTTCAAAGAAGTCCTCAATTAAGTCTACCGTTGGATTTGATCTAAATAGAAAACTAGATAAAGCAGAGTCAACTTCTATTTCTAATAATGTAAATGGTGCTTCCAGATATAGTAGTGTAACACATAGACCTGAAAACACTTCTAAAAGATTGGACAACCATAAAATTTTAGGAAGAAATCTCACTAGTCCTCTAGGATCTCCAGAACAGTTATTTGCAAACCCTTATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGCCCCCCTATGGatgtttcatcttcttcagtGAATGCTTCAAAGCCCAGCCATTCCTTATTTAGGTCAGGTAGTTTTCCCCAAGAGTCTTCTAATACAATTACTAGATTAAGTGCTCCAATGCAAATCGTTGGCGCATCTACCAATAGCTTGTGCCAAATCGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACTTCACAGGGATCAATGGATACAGGTGATGAACAGCCATCAACTAACTGCATGACTAGAGTAAAATCATTGCAACAGTACGCATCTGCCATCACAGAATTAGTTAATGAAAAGatTGAGGCAAGAAAGCAGTTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCACATATGCCATACACAGGCTGCCTCAGCTATGGAAGGAAGTCCAAGCCAAGAAGCTTCAAGATATAGAAGGAGCACCAGCAAGAAACATGGTAGTCCTGATTCAGAAGAATGTCTTGATGAAAACACCCAGGTGCCGAAGGATTTATTATCTCAAAttgaaagtgattttttgaGGGAATTTGAGCATGCCGAAGAACTTGCTAAGACCATTGAGCCTGGAAATACAGAAATGCCAGATGCAATGGAGACAATATTTCAAGCCGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTTATGGGTGATACAGAAAGTGCAGCTGCATTGTATTCAAAAGCCGTCCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCATCTCTGATCCTCAACCCTCCATTTTCATTGACAAACTCTGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCTCAGAGAATGACACTTCTTAAGGGTGATGATAGTCAAGGCATCTTTAAGGAAAAGTTTTAG 2196 0.3994 MAQGTGRSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPSDSQSLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLNPKQTEQDEPLRNKSSSRLVGGFSTTVTDPLRRTEENYHEDCLPFILDDDSSGPESTLFSKKSSIKSTVGFDLNRKLDKAESTSISNNVNGASRYSSVTHRPENTSKRLDNHKILGRNLTSPLGSPEQLFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSVNASKPSHSLFRSGSFPQESSNTITRLSAPMQIVGASTNSLCQIGSSGSQDSAPGTSQGSMDTGDEQPSTNCMTRVKSLQQYASAITELVNEKIEARKQLEAFSIQLVILAIWKQALHICHTQAASAMEGSPSQEASRYRRSTSKKHGSPDSEECLDENTQVPKDLLSQIESDFLREFEHAEELAKTIEPGNTEMPDAMETIFQAALAFGRHGGVEELMGDTESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKGDDSQGIFKEKF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00513 731 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00513 731 MobiDBLite consensus disorder prediction 573 593 - -
Tsu06g00513 731 Gene3D Transferase(Phosphotransferase) domain 1 6 318 - -
Tsu06g00513 731 Pfam Protein kinase domain 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00513 731 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00513 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Tsu06g00513 731 MobiDBLite consensus disorder prediction 558 593 - -
Tsu06g00513 731 MobiDBLite consensus disorder prediction 478 505 - -
Tsu06g00513 731 Coils Coil 513 540 - -
Tsu06g00513 731 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 1 707 - -
Tsu06g00513 731 CDD STKc_ATG1_ULK_like 21 271 - -
Tsu06g00513 731 SUPERFAMILY Protein kinase-like (PK-like) 11 423 IPR011009 -
Tsu06g00513 731 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Tsu06g00513 731 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 707 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00513 Tsu-Chr6 4289068 4297078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00513 1 272 CBL-interacting serine-threonine protein kinases AT2G30360 36.559 8.24e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tsu06g00513 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00513 K08269 - gmx:100791596 1256.51