Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00507 ATGAGTTTAAAAGAAGAGATGATATTTGACCATGATGTTGAGGGAAGCCAATTGCAAGAACTTGACCTATTCAAGTCACCACAACTGCAACTGGAAACCCCAGGAACTGAAATCACCATGAATAACAACGACCAAACATCATCTTCTGTTGTCAATCCCCGCCCCCGAGGGCGTCCACTAGGATCTAAGAATAAGCTCAAGATTCCTATCGTAGAAACACATGTCAACCGCAATGTACTCAGTTCTCATGTGCTTGAGATCACTCATGGTGTTGACTTGTCGACAAGTCTCATGCATTATGCTCGTCATCATGGGCAGAGCATCTGCATCCTCAATGGAAATGGATTGGTGGAAAACATCAAACTTCGTCAACCCACTGGAAAGATTTTCAACTACATGGGAAGATTCAAGATCCTTTTAATATCTGGGACAATTCTCCCATCAGAGGAAAATGCTGGAGATTTGACAATTCTTTTATCGGACACTAATGAACAGGAGATTGGGGGGAGTGTGGTACCCCCTCTTATGGCTTCGGGAACAGTGAAACTGACGGTTGCTTCCTTTGCAAACACTACATTTGAAAAGTTGCCTTCAGTGGAATGA 603 0.4328 MSLKEEMIFDHDVEGSQLQELDLFKSPQLQLETPGTEITMNNNDQTSSSVVNPRPRGRPLGSKNKLKIPIVETHVNRNVLSSHVLEITHGVDLSTSLMHYARHHGQSICILNGNGLVENIKLRQPTGKIFNYMGRFKILLISGTILPSEENAGDLTILLSDTNEQEIGGSVVPPLMASGTVKLTVASFANTTFEKLPSVE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00507 200 MobiDBLite consensus disorder prediction 35 53 - -
Tsu06g00507 200 ProSiteProfiles PPC domain profile profile. 77 200 IPR005175 -
Tsu06g00507 200 PIRSF ESCAROLA 5 200 IPR014476 GO:0003680
Tsu06g00507 200 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 198 IPR014476 GO:0003680
Tsu06g00507 200 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 197 - -
Tsu06g00507 200 CDD DUF296 83 188 IPR005175 -
Tsu06g00507 200 Gene3D - 81 200 - -
Tsu06g00507 200 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 40 198 - -
Tsu06g00507 200 MobiDBLite consensus disorder prediction 35 63 - -
Tsu06g00507 200 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 189 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00507 Tsu-Chr6 4250068 4250670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00507 42 197 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 47.337 3.89e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00507 - - cam:101492608 171.785