Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g00491 | ATGGGGTGTTTTACTATATTGAAGAGAAATAAGAAAAAGTCTGATCAGATTGCGTATGTAAAACGTGTAAGCCCTGGCGAGGATTCACCTACAGTACTTCCTGAACCCCAAGCTCCTACTCGTTCACTCCAGTCTGCGCCTCCTAGTTTTAAGATGAGAGTGAAGCCCATTCAACCTACTAATAAAGTCACTAACAATAGATCGACTAGAATACGAGCATTGTCTGCTCCATCGGCTCTTGATGAAGCAGAACAAGATGCATTGGCCTCAATTGAGTATGAGGGACAAGAAGACTCAAAATACCGAACTGGATCATGGAAGGAGCAGCGTACTTCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTTTCAGTACACTAAAGACTGTTGGAAGCTTTAAGTCGGGGACAGCTATTAGTCCCTTATATGCTTCTGGACCTTTGCCACTTCCACCAACTGGGTCACTTCGAAACTTTTCATATGATGAACTTGCTGCCGCTTGCCTCAATTTCTCTTCAGATAGATACATGTCAGAATCTCTTTCATCCACCATCTATAAAGCTTCCTTTGGCGACGATACTTCAACTTCAAGTTCAAAGAAATTTGAAGCCACTGTCACACGCCTGCGCCCATCACCTCAGGGCCTGAAGGAATTCATAAGTGAAGTTAATACTCTTGCATCTTTGGAGCATCCAAACCTCTGTAGATTGCTAGGATTTCATGCACGTGATGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAAATCTGATGGACCATCAATCGATTGGAGTACAAgaatgaaaattgcaatatgTGCTGCATTAGGACTTTCTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTCGGACATGTTCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTTACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGCCACCCCAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAGGCCTTTCCTATCTGATGATCATCGTTTGTCAATGATCATGGATCCTCAACTTAAAGGTCGCTTTCCTTCTAAAGCAGCGAGTACAATAGCTAACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGAACGACCAACCATGGGAAGCGTTGTTGAGCATCTCAAAAAGATACAAGATTTGAAGCATTCTTCCAGATTCCCACTGCAAGAACCAGCACAAATGTCGAGATCACCAAGTCTCAATGGTATCATCCTCCCTCCACCAAGGTCAAGTTTCTCTCCATCACCATCATCCAGAGCCCTGGTATCTGTTTCACCTCCAAGATGGTCAGGAGTGTCGATTCAACTTCCGCCTCGCGCTTTTTCTTCAACCCTCTATTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTTATCGGCATCAGCCTCAGCCTCTAGGAAGGCTAGTGttgaaggattttga | 1647 | 0.4341 | MGCFTILKRNKKKSDQIAYVKRVSPGEDSPTVLPEPQAPTRSLQSAPPSFKMRVKPIQPTNKVTNNRSTRIRALSAPSALDEAEQDALASIEYEGQEDSKYRTGSWKEQRTSSPQPLPLPSPKGFSTLKTVGSFKSGTAISPLYASGPLPLPPTGSLRNFSYDELAAACLNFSSDRYMSESLSSTIYKASFGDDTSTSSSKKFEATVTRLRPSPQGLKEFISEVNTLASLEHPNLCRLLGFHARDGSEHRMLVYERLYHGSLDRLLYGKSDGPSIDWSTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDHRLSMIMDPQLKGRFPSKAASTIANIAQRCLQMEPSERPTMGSVVEHLKKIQDLKHSSRFPLQEPAQMSRSPSLNGIILPPPRSSFSPSPSSRALVSVSPPRWSGVSIQLPPRAFSSTLYLEELDRQESRKLSASASASRKASVEGF | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g00491 | 548 | MobiDBLite | consensus disorder prediction | 22 | 49 | - | - | |
Tsu06g00491 | 548 | PANTHER | OS01G0822200 PROTEIN | 48 | 547 | - | - | |
Tsu06g00491 | 548 | PANTHER | OS01G0588500 PROTEIN-RELATED | 48 | 547 | - | - | |
Tsu06g00491 | 548 | MobiDBLite | consensus disorder prediction | 93 | 125 | - | - | |
Tsu06g00491 | 548 | Pfam | Protein tyrosine and serine/threonine kinase | 197 | 449 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu06g00491 | 548 | ProSiteProfiles | Protein kinase domain profile. | 172 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g00491 | 548 | MobiDBLite | consensus disorder prediction | 529 | 548 | - | - | |
Tsu06g00491 | 548 | MobiDBLite | consensus disorder prediction | 464 | 495 | - | - | |
Tsu06g00491 | 548 | SUPERFAMILY | Protein kinase-like (PK-like) | 151 | 459 | IPR011009 | - | |
Tsu06g00491 | 548 | Gene3D | Transferase(Phosphotransferase) domain 1 | 257 | 469 | - | - | |
Tsu06g00491 | 548 | Gene3D | Phosphorylase Kinase; domain 1 | 156 | 255 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g00491 | Tsu-Chr6 | 4152169 | 4156758 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g00491 | 151 | 453 | Receptor kinase-like Gene Family | AT4G02010 | 38.065 | 1.21e-58 | 206 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-II | Tsu06g00491 | PK_Tyr_Ser-Thr | 3.8e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g00491 | - | - | gmx:100809117 | 832.787 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu04g01552 | 04 | 16360891 | 16365200 | Tsu06g00491 | 06 | 4152169 | 4156758 | PCT |