Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00491 ATGGGGTGTTTTACTATATTGAAGAGAAATAAGAAAAAGTCTGATCAGATTGCGTATGTAAAACGTGTAAGCCCTGGCGAGGATTCACCTACAGTACTTCCTGAACCCCAAGCTCCTACTCGTTCACTCCAGTCTGCGCCTCCTAGTTTTAAGATGAGAGTGAAGCCCATTCAACCTACTAATAAAGTCACTAACAATAGATCGACTAGAATACGAGCATTGTCTGCTCCATCGGCTCTTGATGAAGCAGAACAAGATGCATTGGCCTCAATTGAGTATGAGGGACAAGAAGACTCAAAATACCGAACTGGATCATGGAAGGAGCAGCGTACTTCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTTTCAGTACACTAAAGACTGTTGGAAGCTTTAAGTCGGGGACAGCTATTAGTCCCTTATATGCTTCTGGACCTTTGCCACTTCCACCAACTGGGTCACTTCGAAACTTTTCATATGATGAACTTGCTGCCGCTTGCCTCAATTTCTCTTCAGATAGATACATGTCAGAATCTCTTTCATCCACCATCTATAAAGCTTCCTTTGGCGACGATACTTCAACTTCAAGTTCAAAGAAATTTGAAGCCACTGTCACACGCCTGCGCCCATCACCTCAGGGCCTGAAGGAATTCATAAGTGAAGTTAATACTCTTGCATCTTTGGAGCATCCAAACCTCTGTAGATTGCTAGGATTTCATGCACGTGATGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAAATCTGATGGACCATCAATCGATTGGAGTACAAgaatgaaaattgcaatatgTGCTGCATTAGGACTTTCTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTCGGACATGTTCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTTACTCCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGCCACCCCAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAGGCCTTTCCTATCTGATGATCATCGTTTGTCAATGATCATGGATCCTCAACTTAAAGGTCGCTTTCCTTCTAAAGCAGCGAGTACAATAGCTAACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGAACGACCAACCATGGGAAGCGTTGTTGAGCATCTCAAAAAGATACAAGATTTGAAGCATTCTTCCAGATTCCCACTGCAAGAACCAGCACAAATGTCGAGATCACCAAGTCTCAATGGTATCATCCTCCCTCCACCAAGGTCAAGTTTCTCTCCATCACCATCATCCAGAGCCCTGGTATCTGTTTCACCTCCAAGATGGTCAGGAGTGTCGATTCAACTTCCGCCTCGCGCTTTTTCTTCAACCCTCTATTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTTATCGGCATCAGCCTCAGCCTCTAGGAAGGCTAGTGttgaaggattttga 1647 0.4341 MGCFTILKRNKKKSDQIAYVKRVSPGEDSPTVLPEPQAPTRSLQSAPPSFKMRVKPIQPTNKVTNNRSTRIRALSAPSALDEAEQDALASIEYEGQEDSKYRTGSWKEQRTSSPQPLPLPSPKGFSTLKTVGSFKSGTAISPLYASGPLPLPPTGSLRNFSYDELAAACLNFSSDRYMSESLSSTIYKASFGDDTSTSSSKKFEATVTRLRPSPQGLKEFISEVNTLASLEHPNLCRLLGFHARDGSEHRMLVYERLYHGSLDRLLYGKSDGPSIDWSTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDHRLSMIMDPQLKGRFPSKAASTIANIAQRCLQMEPSERPTMGSVVEHLKKIQDLKHSSRFPLQEPAQMSRSPSLNGIILPPPRSSFSPSPSSRALVSVSPPRWSGVSIQLPPRAFSSTLYLEELDRQESRKLSASASASRKASVEGF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00491 548 MobiDBLite consensus disorder prediction 22 49 - -
Tsu06g00491 548 PANTHER OS01G0822200 PROTEIN 48 547 - -
Tsu06g00491 548 PANTHER OS01G0588500 PROTEIN-RELATED 48 547 - -
Tsu06g00491 548 MobiDBLite consensus disorder prediction 93 125 - -
Tsu06g00491 548 Pfam Protein tyrosine and serine/threonine kinase 197 449 IPR001245 GO:0004672|GO:0006468
Tsu06g00491 548 ProSiteProfiles Protein kinase domain profile. 172 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00491 548 MobiDBLite consensus disorder prediction 529 548 - -
Tsu06g00491 548 MobiDBLite consensus disorder prediction 464 495 - -
Tsu06g00491 548 SUPERFAMILY Protein kinase-like (PK-like) 151 459 IPR011009 -
Tsu06g00491 548 Gene3D Transferase(Phosphotransferase) domain 1 257 469 - -
Tsu06g00491 548 Gene3D Phosphorylase Kinase; domain 1 156 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00491 Tsu-Chr6 4152169 4156758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00491 151 453 Receptor kinase-like Gene Family AT4G02010 38.065 1.21e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Tsu06g00491 PK_Tyr_Ser-Thr 3.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00491 - - gmx:100809117 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g01552 04 16360891 16365200 Tsu06g00491 06 4152169 4156758 PCT