Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00450 ATGGAATACATAAAATTTCTCCCTCTCATTTCCTTTCTATATGCATTCATTCATATAATAGCTTTTGGCCTAATTAGCAAAAACACAAAATCTCCTAAGCTCCCACCAGGTCCTCCAAGTTATCCTTTAATAGGAAACATATTGCAACTTGGTCCTTCAAAACTTCACCAATCACTTACTAAACTCTCCAAAACATATGGACCAATCATGTCAGTTAAAATTGGCACTATTAACACTGTGGTAATTTCCTCTCCAAAAGTAGCCAAAGAAGCACTTCATAAAAATGACCAAGCTTTATCTAATAGATTGGTACCAGAATCTGTCCAAGCACTTTCACATGATAAATATTCCATAATTTTCATGCCTATTTCACCAAAATGGAAGACTCTTAGAAAAATTTGTGCCACTAAGATATTCTCTTCTCAACAACTTGATTCAACTCAAGCACTtcgtttaaaaaaattgaaagaactAGTTGTTTACTTGCAAGAAAATTGTAGAAAAGGTAAAGCTATTGATATTGATATTGTTTCATCTATGTTGATCGATGCTTCGAAGCCAAATATCGCAGACTATTATCCGGTTTTGCGTAGAATTGATCCGCAGGGAGCACAACGAAGGATGAAAAATCATTACCAGAAATTACTTACACTTTTTGAGTCTATCATTAAAGATAGAAGTAATCGAATGAAAGATTTTACGACGGAAAGAAGTGATGTGTTAGACTCATTTCTCGATATCATACAAAAAGAAAATCCTGAATTGACACTACATGACGTGTTACATCTATTTCTGGACTTATTTGTGGCTGGAACAGACACATCATCAGCCACAGTTGAATGGGCAATGGCAGAGTTGCTACAAAACccaaagaaaatgaagaaaataagaGAGGAACTTCAACAAGTTATCAACAAAGATGAAGGTCCAAAAGACTTAGATATCAATAAGCTCCCTTACCTACAAGCAGTTGTAAAAGAAACCCTAAGGTTGCATCCATCAGCCCCAATATTAGTCCACAAATCAATTTCTGATGTTGACTTATGTGGCTTTAGAGTACCAAAAGACACACAAGTTCTAGTGAATGTGTGGAGCATGGGAAGAGACTCGAGTATTTGGACCGATCCTGATGTGTTTCTACCCGAAAGATTTTTAGAATGCGGAGAGATTTTTAGAGGAGAAGATTTTGGATTCATTCCATTTGGAGCTGGTAGAAGAATGTGTCCCGGCGTTCCATTTGCTCATAGAGTTGTGCATACCATGTTGGCCACTTTGCTTTACCATTTTGATTGGAAGCTACCTGATGGCGAAAAGATTGAAGATATGGACATGACTGAAAAATTTGGGATTACTATGCACAAAATCAAGCCTCTCATGACTATTCCGGTCAAATCATGA 1398 0.3577 MEYIKFLPLISFLYAFIHIIAFGLISKNTKSPKLPPGPPSYPLIGNILQLGPSKLHQSLTKLSKTYGPIMSVKIGTINTVVISSPKVAKEALHKNDQALSNRLVPESVQALSHDKYSIIFMPISPKWKTLRKICATKIFSSQQLDSTQALRLKKLKELVVYLQENCRKGKAIDIDIVSSMLIDASKPNIADYYPVLRRIDPQGAQRRMKNHYQKLLTLFESIIKDRSNRMKDFTTERSDVLDSFLDIIQKENPELTLHDVLHLFLDLFVAGTDTSSATVEWAMAELLQNPKKMKKIREELQQVINKDEGPKDLDINKLPYLQAVVKETLRLHPSAPILVHKSISDVDLCGFRVPKDTQVLVNVWSMGRDSSIWTDPDVFLPERFLECGEIFRGEDFGFIPFGAGRRMCPGVPFAHRVVHTMLATLLYHFDWKLPDGEKIEDMDMTEKFGITMHKIKPLMTIPVKS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00450 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Tsu06g00450 465 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 362 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 322 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 175 464 - -
Tsu06g00450 465 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 177 - -
Tsu06g00450 465 Gene3D Cytochrome P450 23 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 175 464 - -
Tsu06g00450 465 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 SUPERFAMILY Cytochrome P450 35 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 Pfam Cytochrome P450 35 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 Pfam Cytochrome P450 181 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu06g00450 465 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00450 Tsu-Chr6 3863586 3865295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00450 16 464 Cytochrome P450 AT2G45550 44.064 1.06e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00450 - - pvu:PHAVU_010G012700g 642.499