Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00386 ATGGCAACCAATTTGAACAATCTATTCAAAACTTCAATTCTAAATAACAAGACACAACAAAAGAACAACCTTTTCACTACAACCACACAAAAAACCACAAGATTTCAAGTTACTATAAATGCAACATCCAATGGAAAAAGTGGTAAACAACTCATAGAATCTGGTACAATTAGAACAATCTTGCCAAAAGATGCTTCCACAGCTATGAACTCAGAAGGTTTCATTCTCCTTGATGTTAGACCAAATTGGGAGAGAGAGAAGGCACGTGTGAAAGGGTCATTGCATGTGCCAATGTTTGTTGAAGATAAGGATAATGGTCCTTTAACTTTGCTTAAGAAATGGGTTCATTTTGGTTACATTGGTGCTTGGACTGGTCAATATCTTACTACTTTTAACAATGAATTTCTTAGTCAAGTTGAAAATGTTGTTCCTGGTAAAGATAGCAAGATTCTTGTTGCATGTGGAGAAGGATTGAGGTCAATAACAGCAACTTCAAAGCTGTATAATGGAGGCTACAAAAATGTTGGATGGTTAGTTGGAGGTTTTAATCGTTCACAAGACAATGATTTCTCAGAAATAGAAGGAAATGAGAAGTTGAAGTATGCTACAATTGGAGGAGCCTCTTACTACTTTCTTCAATTACTCATACTTTTGCAGACAGTGAGTAAATAG 672 0.3557 MATNLNNLFKTSILNNKTQQKNNLFTTTTQKTTRFQVTINATSNGKSGKQLIESGTIRTILPKDASTAMNSEGFILLDVRPNWEREKARVKGSLHVPMFVEDKDNGPLTLLKKWVHFGYIGAWTGQYLTTFNNEFLSQVENVVPGKDSKILVACGEGLRSITATSKLYNGGYKNVGWLVGGFNRSQDNDFSEIEGNEKLKYATIGGASYYFLQLLILLQTVSK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00386 223 Gene3D - 57 203 IPR036873 -
Tsu06g00386 223 SMART rhod_4 60 191 IPR001763 -
Tsu06g00386 223 ProSiteProfiles Rhodanese domain profile. 70 194 IPR001763 -
Tsu06g00386 223 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 55 184 IPR036873 -
Tsu06g00386 223 CDD RHOD 64 183 - -
Tsu06g00386 223 Pfam Rhodanese-like domain 62 184 IPR001763 -
Tsu06g00386 223 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 223 IPR044614 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00386 Tsu-Chr6 3317515 3319298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00386 1 210 Sulfurtransferasese or Rhodanese AT3G08920 55.238 1.15e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00386 - - gmx:100795945 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00386 06 3317515 3319298 Tsu06g00386 06 3317515 3319298 ECH