Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00381 atGGAGGGTCATCAATTCCATCAAAAAAACCAAAGACAACAAcaaaatcttcatcttcatcaaaatattaatactactactactattaacGTCGTTGATGTTGTTGATAGATTCCCGCAATGGAGCATCCAAGAGACGAAAGAGTTTCTTACGATCCGAGCGGAGTTAGATCAAACTTTCATGGAGACTAAAAGGAACAAACAGTTGTGGGATGTTATCTCTAATCATTTGAAAGAAAAGGGTTACCATAGAAGTGCAGAACAGTGCAAGTGCAAATGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGACAGAAGCATTGAGACATCAATTTCCTTTTTACAATGAACTTCAAGAAATTTTCACATCAAGGATGCAGAGGATGCTATGGGCGGAAGCCGAAGATGGATCGAAGAAAAAGGCGACACAGCTTTCAACTGACGAcgaagatgaagaaagtgaagcaATATCTCAAAAGGGTAGAagtagaaagaagaaaaaagctAAGATAGTTAGCGAAAGCGGCGGTAGCAGCAGCAATATCTTCAACAATTTGAAAGAGATTTTAGATGAATTCATGAGGCAACAACTACAAATTGAAGCAAAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAAAGGAGGTTGAGAGAGATGGAATGGAGACAACAAATGGAAGTGTTGGAAAATGAGAGGATATTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGAGGATTAGAGAAGAAGTTAGGGCTGAGAAGAGAGATGCTTTAATCACAGCTTTGTTAAACAGGTTAGAAAGACAATAG 828 0.3514 MEGHQFHQKNQRQQQNLHLHQNINTTTTINVVDVVDRFPQWSIQETKEFLTIRAELDQTFMETKRNKQLWDVISNHLKEKGYHRSAEQCKCKWKNLVTRYKGCETMETEALRHQFPFYNELQEIFTSRMQRMLWAEAEDGSKKKATQLSTDDEDEESEAISQKGRSRKKKKAKIVSESGGSSSNIFNNLKEILDEFMRQQLQIEAKWMEAFEARENERRLREMEWRQQMEVLENERILMEQRWREREEQRRIREEVRAEKRDALITALLNRLERQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00381 275 SMART sant 37 99 IPR001005 -
Tsu06g00381 275 Coils Coil 222 242 - -
Tsu06g00381 275 Pfam Myb/SANT-like DNA-binding domain 40 124 IPR044822 -
Tsu06g00381 275 Gene3D - 41 102 - -
Tsu06g00381 275 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 275 - -
Tsu06g00381 275 CDD GT1 39 104 - -
Tsu06g00381 275 ProSiteProfiles Myb-like domain profile. 41 97 IPR001005 -
Tsu06g00381 275 MobiDBLite consensus disorder prediction 140 180 - -
Tsu06g00381 275 PANTHER - 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00381 Tsu-Chr6 3259855 3261453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00381 18 274 Trihelix Transcription Factor Family AT2G38250 50.916 3.73e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu06g00381 Myb_DNA-bind_4 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00381 - - gmx:100791013 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00381 06 3259855 3261453 Tsu06g00381 06 3259855 3261453 ECH