Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00380 ATGGCAAAACAAGAAAATTCAAAACAAGGGTGTTTTTCTAGTTTCATAAAAGTGCTTATTTGTGCTAGAAATGAAACTAGTCCACCAGTGTATCCATCAGAAaatgttgaagaaaaagaaccaATTCAACACAAAAAAGATAAACTTTTTGATGAATCTATTACTACTCCTAGTGTAGTAGCAAGATTAATGGGTTTAGATTCACTTCCAAGTACCAAAAAGGTTGTTAAAGGAACAACCTTAGATTCTGTTCCAAGAAGTAAATCAGTTAACTTTGTTGATTATTTACttgattttgatcaaaatattacaaaccaTCGTCGTGTgaaaacttcatcttcttttagAGAAGTTCCTTCATTTGTTGACAAGcaaaaaaattacctttttgtccttgatattgatgataaaaaggGTAGTAAGGTTCAAGAAGAAAATGGAActaagttgaagaaaaagaacaagGAAATTGTAAGagtgaagaaggaaaaaaatcaaGGGAAGAACAAGAAAATTTCTAAGTTAAAAGATGAACCAAGAAGggttcctttttcttcttcaaattcttcaaagTATAAATCAAAGGTTAGAAATTCAAGTGTTTCTTCAAGGTGTAATAATTGTAGTTATTATGGTTATGGTGAAGTTGGTTCAAGTTCAAGTTCATGTTCAATATCTTCATTACCAAATAGACATAAGAAAGAGTTTGTTGAACCAAAAATAAGGaacaaagtgaaaaataatGTTTCACCAAAGAAGATTCAGGCAGAACATAGCTTGGAAAATCTTAGTCCTGTTTCAGTTCTTGATGTTAATGATTATGCTTTTCTTTATGGAGCTGATTATTCAGGTACAAACACTTTGGCTTCAAAGTCAAAGAGGAAATCTAAATCTTTATTGACAGTGTCCTTGGATGAAGATGTTAATGACAAAGCAAACAATAATAAAGGCTATTATGCCCACACTGACATCAACAGAGAAGCAGAGTATTACTCAGACTTGATGTTGAAGCTTCGTATTTTGACAGAAGAAACTATAAAGAAGACAGATTGTACTTCAAAGGGGGAAAGCTTAGAGgaaattgttttggtttttgaaCAAATAGTTTTTGATCATTTATTACTTGAGGTAGTGAATGAAGTTGTAGAATTTTCTACTTAA 1161 0.261 MAKQENSKQGCFSSFIKVLICARNETSPPVYPSENVEEKEPIQHKKDKLFDESITTPSVVARLMGLDSLPSTKKVVKGTTLDSVPRSKSVNFVDYLLDFDQNITNHRRVKTSSSFREVPSFVDKQKNYLFVLDIDDKKGSKVQEENGTKLKKKNKEIVRVKKEKNQGKNKKISKLKDEPRRVPFSSSNSSKYKSKVRNSSVSSRCNNCSYYGYGEVGSSSSSCSISSLPNRHKKEFVEPKIRNKVKNNVSPKKIQAEHSLENLSPVSVLDVNDYAFLYGADYSGTNTLASKSKRKSKSLLTVSLDEDVNDKANNNKGYYAHTDINREAEYYSDLMLKLRILTEETIKKTDCTSKGESLEEIVLVFEQIVFDHLLLEVVNEVVEFST 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00380 386 Pfam DUF761-associated sequence motif 54 73 IPR032795 -
Tsu06g00380 386 PANTHER OS05G0128300 PROTEIN 1 385 - -
Tsu06g00380 386 MobiDBLite consensus disorder prediction 182 198 - -
Tsu06g00380 386 Coils Coil 150 178 - -
Tsu06g00380 386 PANTHER ALC-INTERACTING PROTEIN 1 1 385 - -
Tsu06g00380 386 MobiDBLite consensus disorder prediction 161 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00380 Tsu-Chr6 3250177 3252697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00380 1 381 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 25.670 1.28e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00380 - - mtr:MTR_4g015650 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00380 06 3250177 3252697 Tsu06g00380 06 3250177 3252697 ECH
Tsu06g00380 06 3250177 3252697 Tsu04g01633 04 17289273 17293274 PCT