Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00375 ATGGACTATTTTGTTAAGAAGGTTAGGAATGAGAGTGATATGATTTTAAGTGAAAATTCTAAAGATTTTAACAAGTTTAAAAAAGCTTGTGAAATGATTAAGAGGGCCCTTTCATACAATAAAACTGCTGAACTTGTAGTTGATCTTGTCAACAAGGATGGCGAGGACATGGTGTTTAAATGCACTATCAACCGAGATcagtttgaaattttaaatgagGATTTGTTTCAGAAGTGTGAGCCGATTGTTACTAAGTGTCTTGGTGATGCTAAAGTAATGAAACAGGATATCTCCGGGGTTGTCCTTGTTGGTGGGTCTACAAGGATACCAAAAGTACAAGAGCTTCTGATGAATTActtcaataaaaattatgaaaataaagaggAATTCTTCAAAAGACTTAACCTGGATGAAGCCGTTGCTTATGGAGCTGCGATCCAAGGCGCAATTGTGAGGGGAGAGAAGAAAGTAAAGAACATGGTTGTTATTGAAGTTGTCCCTTTCTCCCTTGGTTTGGAGAAAAAAATATCAGAGAGAAGTCTATATCCTTTATCAGACTCCACAGAGACATTAAAAGGAGGATTAATGCATGTTGTCATGCCTAGGAACAAAACATATCCTACGACAACAGTGGAAACAACTTACTGTGAGAAGGAATTGAAGTTGCATTTTCCAATTTATGAAGGAGAGAGCAATAAGTCAAAGGATAACACTTTTCTTGGTGAATTAGTGTTGGATTTCTGTGGTTTTGCTGAGAGAGAGATTAGCAAGATCACCATTGTGTTCAATATTGATTCAAAAGGTATTCTGACAATCTCAACAGAGGATAGTACTACTGACTTAAGAACAATATTGTTATTGATAGTGCAAGACAAGAGGAGATTGACAAAATGGTAA 897 0.3489 MDYFVKKVRNESDMILSENSKDFNKFKKACEMIKRALSYNKTAELVVDLVNKDGEDMVFKCTINRDQFEILNEDLFQKCEPIVTKCLGDAKVMKQDISGVVLVGGSTRIPKVQELLMNYFNKNYENKEEFFKRLNLDEAVAYGAAIQGAIVRGEKKVKNMVVIEVVPFSLGLEKKISERSLYPLSDSTETLKGGLMHVVMPRNKTYPTTTVETTYCEKELKLHFPIYEGESNKSKDNTFLGELVLDFCGFAEREISKITIVFNIDSKGILTISTEDSTTDLRTILLLIVQDKRRLTKW 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00375 298 Pfam Hsp70 protein 1 280 IPR013126 GO:0005524|GO:0140662
Tsu06g00375 298 Gene3D - 80 135 - -
Tsu06g00375 298 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 156 287 IPR029047 -
Tsu06g00375 298 PANTHER HEAT SHOCK 70 KDA PROTEIN 18-RELATED 2 297 - -
Tsu06g00375 298 PANTHER HEAT SHOCK PROTEIN 70KDA 2 297 IPR013126 GO:0005524|GO:0140662
Tsu06g00375 298 ProSitePatterns Heat shock hsp70 proteins family signature 3. 100 114 IPR018181 -
Tsu06g00375 298 Gene3D - 136 148 - -
Tsu06g00375 298 Gene3D Actin; Chain A, domain 4 1 79 - -
Tsu06g00375 298 PRINTS 70kDa heat shock protein signature 97 113 - -
Tsu06g00375 298 PRINTS 70kDa heat shock protein signature 255 271 - -
Tsu06g00375 298 CDD HSP70_NBD 1 149 - -
Tsu06g00375 298 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 150 297 IPR029047 -
Tsu06g00375 298 SUPERFAMILY Actin-like ATPase domain 1 150 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00375 Tsu-Chr6 3185811 3187671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00375 1 297 Calmodulin-binding Proteins AT3G12580 39.867 3.77e-61 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00375 K03283 - vvi:100261526 197.593