Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00361 atgagaaagcACTTTCTTTCGTCCACCTCCACTTATAAAAAGGCCACTCCACCCTTCCACTTGAAAACCAACCAAGCATTCTCAGCACACACAAAACACACACCACAAGAATCAACAAAAATGCCTTCATCTTCCACAACCATAGTTTCAAAATGCACAATCTACCCAAACcaaaaatcatcaataaaaccCTTAAAACTCTCTGTTTCTGATCTTCCAATGCTTTCATGTCACTATATTCAAAAAGGAATTTTACTTTCTACACCCCCTTATTCCTTTGAAGACCTTATTCAAACCCTCAAAACTTCTCTCTCCATTACTCTCTCTTACTTCCCTCCTCTCGCCGGCCGACTCACCACCGACTCCGACGGTTACATTTACATAACTTCCAACGACGCTGGCGTCGATTTCATTCACTCCAAAGCCAAACACTTAACCTTAAACACCGTCGTTTCACCTTCTTTGATCGATGTTCATCCTTGTTTCAAAGAATTCTTCGCTTATGACATGCTGGTTTCTTACTCCGGTCACCAAATCCCTCTCGCCGCCGTTCAAGTAACCGAACTCGCCGACGGTGTTTTCATCGGTTGTACTGTTAATCATTCTGTAACCGACGGTACTTCTTTCTGGCACTTCTTTAACACTTTCGCCGCCGTCACTAAAGGCGGCGCTGGCGGCGCCGTTAAAATCACGAAATCTCCAGATTTCATAAGAAACACAATCTTTAACTCAACCGCTGTTCTTCCTATCCCCGCCGGCGGTCCCACCGTCACTTTCGACGTCGATGAACCTCTCCGTGAACGTGTCTTTCACTTCTCTCGTGAATCCATTCTCAAACTTAAACAGAAAGCAAACAGTAACAGCAACGGTAACGGTAACAGTAACGGTTTAACAGATCCAACGGAGGTAATAGCAAAACAAGCAAATGACAGTTGGAAAAACGTTAACTCTAACGGTCATGTTAACGGAAGCGTTAAATCTAACGTGAGAAACGAGATCTCGTCGTTTCAATCGTTAAGTGCACAGTTATGGCGATCAGTGACACGTGCGCGAAAATTAGATTCAACAAAAACGTCGACGTTTCGTATGGCTGTAAATTGTCGTCATAGATTAAACCCAAAAATGGAACCGTTTTATTTCGGTAACGCAATACAAAGCATCCCAACCGTTGCTTCAGTTAAAGATATTTTATCCAACGATCTAAAATACTGCGCTGGATTACTTCATCAAAACGTCGTCGCACATGATAATGCTACGGTGCGCCGCGGAGTAGAGGATTGGGAAAATAATCCTAGGTTATTTCCACTTGGGAATTTTGATGGTGCTATGATAACAATGGGTAGTTCACCTCGTTTTCCTATGTATGACAATGATTTTGGTTGGGGTATACCTTTGGCTATAAGAAGTGGAAAAGCTAATAAATTTGATGGGAAAATTTCAGCTTTTCCTGGTAGAGAAGGAAATGGAAGTGTTGATCTTGAAGTTGTTTTGAAACCTGAAACTATGGTTGGACTTGAAAATGACATTGATTTTATGCAGTATGTTACGGATGTAGTGTGA 1560 0.4141 MRKHFLSSTSTYKKATPPFHLKTNQAFSAHTKHTPQESTKMPSSSTTIVSKCTIYPNQKSSIKPLKLSVSDLPMLSCHYIQKGILLSTPPYSFEDLIQTLKTSLSITLSYFPPLAGRLTTDSDGYIYITSNDAGVDFIHSKAKHLTLNTVVSPSLIDVHPCFKEFFAYDMLVSYSGHQIPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKGGAGGAVKITKSPDFIRNTIFNSTAVLPIPAGGPTVTFDVDEPLRERVFHFSRESILKLKQKANSNSNGNGNSNGLTDPTEVIAKQANDSWKNVNSNGHVNGSVKSNVRNEISSFQSLSAQLWRSVTRARKLDSTKTSTFRMAVNCRHRLNPKMEPFYFGNAIQSIPTVASVKDILSNDLKYCAGLLHQNVVAHDNATVRRGVEDWENNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGIPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLKPETMVGLENDIDFMQYVTDVV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00361 519 MobiDBLite consensus disorder prediction 281 300 - -
Tsu06g00361 519 Gene3D - 46 248 IPR023213 -
Tsu06g00361 519 Gene3D - 263 511 IPR023213 -
Tsu06g00361 519 Pfam Transferase family 46 511 - -
Tsu06g00361 519 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 45 516 - -
Tsu06g00361 519 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 45 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00361 Tsu-Chr6 3058794 3060733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00361 98 507 Monolignol Biosynthesis Gene Families AT5G48930 27.857 3.81e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00361 - - gmx:100780358 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00361 06 3058794 3060733 Tsu06g00361 06 3058794 3060733 ECH