Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00331 ATGTCAAACAGTGCTCCCCAACCAAAGTATGATGTTTTCGTAAACTTTAGGGGCAACGACATCCGCGGTGGCTTTCTTGGCCATTTGGCTAAGGCTTTTTCTCGAAAGCAAATAAATGCCTTTGTTGATGACAAACTTAAGAGGGGATATGACATATCACATTCACTTGTTCAAGCAATTGAAGGCTCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTCTTCACATTGGTGTTTAGAAGAACTTGTGAAAATAATTGAGTGCAAAGAGAAATATGGACAGATAGTAATACCTGTTTTCTACAGGGTAGATCCTACAGATGTACGACATCAAAAAAAGAGTTATGAAAATGCATTTGCTGAACttgaaaaaaagtataattcGTTGGAGGTGCAAATATGGAGACACGCTTTGAACAAATCTGCTAATTTGTCTGGAATTAAGTCCATAGATTTTAGGAATGATGCTGAGCTACTGGAAGAAATCATCAATCTTGTGTTAAAGAGGTTGAGTAAGCACCCTATTCACACAAAAGGTCTTATTGGAATTGGCAAACCAATTGCACATTTAGAATCGTTGTTACGTCAAGAGTCAGAAAAGGTTCGTGTCATTGGAATTTGGGGTATGGGAGGTATTGGCAAGACAGCAATTGCagaagaaatttttaaccaaaagTGCTCTGAATATGAAGGTTGTTGTTTTTTGTCAAAGGTAAGTGATGAATTAGGAAGACATGGTGGAATGAtacttttgaaagaaaaacttTTTTCTACATTATTTGCAGAAGATGTGAAAATCAATTCACCAAATGGGCTATCTGATTATATTGAGAGAAGGATTAGCCGTATGAAGGTTCTTATTGTTCTTGATGATGTTAAGGAAGAAGGTCAGCTAAAGATGTTATTTGGAACTCTTGATTTGCTTCAATCCAATAGTAGAATAATTGTAACAACTAGAGATAAGCAAGTACTTATTACTAATGaagttgatgataatgatatatATGAAGTTGGGGTATTGGATTCTAGTGAAGCACTTGAGCTTTTCAATTTGAATGCATTTAGACAAAGTCATCTTGAAATGGAGTACTATGAGCTATCAAAGAGGGTAGTGAATTATGCCAAAGGAATTCCGTTAGTTCTTAAAGTTTTGGCTCATCTACTTCTTGGAAAAGATAAGGCAATATGGGAAAGTCAGCTAGACAAACTTAAAAGACTGCCAATTAGAAAAGTTCATGATGTAATGAGGCTCAGTTATGATGATCTTGATCGTTTAGAGCAAAAGTACTTTTTAGATATTGCATGTTTCTTCAATGGGTTGAGTTTAAAAGTGGATTACATGAAACTTTTATTGAAAGATTGTAAAAGTGATAATTCAGTGGCTGTTGGGTTAGAAAGGTTGAAAGATAAAGCTCTTATAACTATTTCTGAAGATAATGTTATATCTATGCATGACATTCTGCAAGAAATGGGTCGAGAGGTTGTTCGCCAAGAATCTAGTAAAGACCCTAGAAAACACAGTAGGTTATGGGATTATGATGACATTTGTGATGTATTGGAAAATGACAAGGGTAATGATGCTATTAGAAGCATACGTGGAGACTTGTCAGGAAATAGAAAGCTGTATTTAGGCCCTCATGCAATTGCTAAGATGACCAACCTGCAATTTGTGGATTTTCGTGGTAAAAATAAACCCTTTGACATCTTATTATATTTGAAAGCGAAATATGACCAAAATTGTATGATTCTTCTTCCTCAAGGACTTCAATCTTTTCCACCTGATATAAGATATCTTCATTGGAAACATTACCCTCTAAAATCATTCCCAGAGAACTTTTCTGCAGAGAATCTTGTTATATTGGACTTGTCATATAGTCTAGTGGAAAAGCTTTGGTGTGGAGTGCAGGACCTAGGTAATCTGAAAGAAGTTCGACTCTCTAATTCAATATTACTGAAGGAGTTACCAGACTTTTCAAAAGCCACAAGTCTTAATGTATTGCTTATCTACAGTTGTCCTCGGTTGGAAAGCGTCCATCCctctattttctctcttcaaAAGCTTGTGCAATTAGACCTAAGTTTTTGCCATTCCCTTGCAACATTTACAAGCAACTCCCATTTAAGCTCCCTCCATTATCTCAACCTTGGATTTTGCAGAAATCTTTGTAAATTCTCAGTGACTTTGGAGAATATAATCGAATTAGATCTAACGGCCATTCCAATCAATGCACTGCCAGCATCtattggatttcaaaccaagctAGAAACCCTGGTTTTAAAACTAAGTGAAATTGAGAGCATACCTTCAAGCATCAAGAATCTTACAAGACTTAGAAAACTAGACATGATAGATTGCAATAAGCTTCTGGCTCTACCCGAGCTTCCTTCATCAGTTGAAACTATACTCGTTGAATGTCGATTAATTAAAACTGTATTGTTCCCTTCAACAGCTGCTGAACAATTCAAGGAAAACAAGAAAAGGATTGAGTTTTGGAATTGCTTGAACTTGGATGAACGTTCTCTCATAAATATTGGGTTGAATCTGCAAATCAATTTGATGAAGTTTACATATCAACATTTATCGACACTGGAAAATGATTATCTTGAAAGTTATGTTGATTACAAAGATGACTTTGCTTCTTATCAAGCTGTGTATGTGTATCCTGGAAGTAGTATTCCAGAATGGTTCAAGTACAAGACAACAGAGGATGATATGATTGTTGATCTCTCTCCACCGCATCTCTCCCCTTTGTTGGGCTTTGTTTTTTGCTTTATCCTTGCTGGGGTGGTTACATATGATAACCCAATTGACTTTAAAATCACTACAATTGATGCTGAGGGTGATGGTGAAATGGTTGGTGTCAAAATCTACACGAATAGGTCAAATTTTTTCCACGTATATTCAAATCATGTGTGTATGATATACGACCATCCAAGTTCTCAGTACCTAACTAACATAGTAAAAAATCAGACATGGTTTAAAATCAAGGTTACAGCATCGACAGAATTCAATGTATTTGGAAAAAGATCACAGTTGAAGCTAAAAGGGTTTGGCATCAGCCCCATAAGCCACTCAAGATATCACAAACTCATTCAACAAATGGAATTGTTTGATTTTGATGCATCAGTTGCTGCACTTTCAATTTCTGAGGCAGGTAAAGAAGTACAGCTTAAGGAGATTGCAGAAGTACGTGTATGA 3204 0.3496 MSNSAPQPKYDVFVNFRGNDIRGGFLGHLAKAFSRKQINAFVDDKLKRGYDISHSLVQAIEGSFISLIIFSENYASSHWCLEELVKIIECKEKYGQIVIPVFYRVDPTDVRHQKKSYENAFAELEKKYNSLEVQIWRHALNKSANLSGIKSIDFRNDAELLEEIINLVLKRLSKHPIHTKGLIGIGKPIAHLESLLRQESEKVRVIGIWGMGGIGKTAIAEEIFNQKCSEYEGCCFLSKVSDELGRHGGMILLKEKLFSTLFAEDVKINSPNGLSDYIERRISRMKVLIVLDDVKEEGQLKMLFGTLDLLQSNSRIIVTTRDKQVLITNEVDDNDIYEVGVLDSSEALELFNLNAFRQSHLEMEYYELSKRVVNYAKGIPLVLKVLAHLLLGKDKAIWESQLDKLKRLPIRKVHDVMRLSYDDLDRLEQKYFLDIACFFNGLSLKVDYMKLLLKDCKSDNSVAVGLERLKDKALITISEDNVISMHDILQEMGREVVRQESSKDPRKHSRLWDYDDICDVLENDKGNDAIRSIRGDLSGNRKLYLGPHAIAKMTNLQFVDFRGKNKPFDILLYLKAKYDQNCMILLPQGLQSFPPDIRYLHWKHYPLKSFPENFSAENLVILDLSYSLVEKLWCGVQDLGNLKEVRLSNSILLKELPDFSKATSLNVLLIYSCPRLESVHPSIFSLQKLVQLDLSFCHSLATFTSNSHLSSLHYLNLGFCRNLCKFSVTLENIIELDLTAIPINALPASIGFQTKLETLVLKLSEIESIPSSIKNLTRLRKLDMIDCNKLLALPELPSSVETILVECRLIKTVLFPSTAAEQFKENKKRIEFWNCLNLDERSLINIGLNLQINLMKFTYQHLSTLENDYLESYVDYKDDFASYQAVYVYPGSSIPEWFKYKTTEDDMIVDLSPPHLSPLLGFVFCFILAGVVTYDNPIDFKITTIDAEGDGEMVGVKIYTNRSNFFHVYSNHVCMIYDHPSSQYLTNIVKNQTWFKIKVTASTEFNVFGKRSQLKLKGFGISPISHSRYHKLIQQMELFDFDASVAALSISEAGKEVQLKEIAEVRV 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00331 1067 ProSiteProfiles TIR domain profile. 8 172 IPR000157 GO:0007165
Tsu06g00331 1067 SMART till_3 9 146 IPR000157 GO:0007165
Tsu06g00331 1067 Gene3D - 341 425 IPR042197 -
Tsu06g00331 1067 Gene3D Ribonuclease Inhibitor 530 728 IPR032675 -
Tsu06g00331 1067 Coils Coil 114 134 - -
Tsu06g00331 1067 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 1040 - -
Tsu06g00331 1067 Gene3D Ribonuclease Inhibitor 729 809 IPR032675 -
Tsu06g00331 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 1040 IPR044974 GO:0006952
Tsu06g00331 1067 SUPERFAMILY "Winged helix" DNA-binding domain 412 522 IPR036390 -
Tsu06g00331 1067 Gene3D - 173 333 IPR027417 -
Tsu06g00331 1067 Pfam C-JID domain 889 998 IPR045344 -
Tsu06g00331 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Tsu06g00331 1067 Pfam NB-ARC domain 193 420 IPR002182 GO:0043531
Tsu06g00331 1067 Gene3D - 7 172 IPR035897 -
Tsu06g00331 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 435 IPR027417 -
Tsu06g00331 1067 Pfam TIR domain 9 174 IPR000157 GO:0007165
Tsu06g00331 1067 SUPERFAMILY L domain-like 535 865 - -
Tsu06g00331 1067 PRINTS Disease resistance protein signature 684 700 - -
Tsu06g00331 1067 PRINTS Disease resistance protein signature 376 390 - -
Tsu06g00331 1067 PRINTS Disease resistance protein signature 205 220 - -
Tsu06g00331 1067 PRINTS Disease resistance protein signature 281 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00331 Tsu-Chr6 2716331 2721556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00331 10 795 WRKY Transcription Factor Family AT4G12020 32.789 2.39e-94 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00331 - - mtr:MTR_4g014120 1320.06