Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00327 ATGGAGAACAATACTTGGCATAATGctaaagatttgatttttggCTTAAACCCATTTCAGAAATGTAGAAAAAATCAAAAGggtagttttattttgttgatttttttactttttgtatgTTTTAGTGTTGAACCTGTTTTAGGTCATTTATGGGATGGTGTTGTTGTGACACAATCTGATTTTCAATCTCTAAGGGCTATTAAAAATGAACTTATTGATTCAAAAGGGATTTTGAAAAGCTGGAATGATAGTGGTTTAGGTGCTTGTTCAGGTAATTGGGTTGGAATCAAATGTTTGAAAGGTGAAGTTGTTGCAATTCAGCTTCCTTGGAAAAGTTTAGGTGGAAAAATTTCTGAGAAAATTGGTCAACTTCAATCTCTTAGAAAATTAAGTCTTCATGATAATTCACTTGTTGGTtctattcctttttctcttggTTTTCTACCTAATCTTAGAGGTGTTTATCTTTTCAATAATAAGCTTTCAGGTTCTATTCCTCCTTCTATTGCTAATTGTCCAATGCTTCAATCTTTTGATGTTAGTCATAATTCACTTATTGGTAAAATTCCTTCTGGTTTAGCAAATTCAACTAGGATTTTTAGGATTAATTTGAGCTATAATTCACTTTCTGGTTCAATTCCTAGCTCATTCACTATGTCACATACTTTAACTATTCTTTCTCTTGAATTCAATAATTTAACTGGTCCTATTCCAAGTGAATTAGGTAAACTTACAAGGCTTAGAATTCTTGATCTTTCAAACAATGCTATCAATGGTAGTTTTCCTTTAAGCTTCTCTAATTTGTCTTCTCTTGTTTCATTGAATGTTGAAAACAATCATCTTGAAAACCATGTGCCTAATACTTTTGAAAATTTACATAACCTTTCTGTGATTAACTTGAAGAATAATAAGTTTGATGGTAAAATTCCATCAACACTTGGAAATATTTCAACCATTAGTCAAATTGATTTGTCTCAGAACAAATTTGTTGGTGAAATTCCTGATTCTTTTACTAAACTTGCAAATCTAAGTTCATTCAATGTCTCTCATAACAATCTATCTGGTCATGTTCCATCTCTACTTTCCAAAAAATTCAATGCTAGTTCATTTGAAGGGAACTTTGGTCTATGTGGCTTCATAAGTTCAAAACCATGTCCttcaccatcaccaccacctcATAATCCTCCAGCTCAATCACCAGAAGAACCTCCTTCAAAGAAACATCACAGAAAATTGAGCACAAAGGACATAATCCTCATAGTAGCTGGTGTTCTTTTGTTGATTTTGCTATTACTTTGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCAAGCAGAAAGAGTAGCAAAGCTGCTAAAGCTGCTGCTTCTGCTAGGAGTGTGGAGAAAGGTGGTCAAACTGGTGGAGAAGCTGTATCAGGAGGTGAAGCTGGTGGAAAACTAGTTCACTTTGATGGACCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCTACTGCTGAGATAATGGgaaaaagtgcttatggaacaGCTTACAAGGCAACATTGGAAGATGGTAATCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACAGAAGGAGTTTGAAGCCGAGGTTGCTTCACTTGGCAAAATCAGACATCCAAATCTGTTGGCTCTTAGAGCTTACTATCTTGGACCTAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGCGGACCTGAAATCATTGTCGAGTGGCCAACAAGGATGAAAATAGCAATTGGAATCACCAATGGTCTATGTTGCCTTCACAATCAAGAGAATATTATACATGGCAATCTGACCTCAAGCAACATACTATTAGATGAGCAAACAACTCCTCACATCACAGATTTTGGTCTTTCAAGACTAATGACAACTTCTGCCAACACAAACATCATTGCTACAGCAGGAAGTCTTGGCTACAATGCACCAGAGCTTTCAAAGACAAAGAAACCGACCACAAAAACCGATGTTTATAGCCTCGGTGTTATCCTTTTGGAACTCTTAACTGGTAAACCGCCTGGGGAACCAACCAATGGAATGGACTTGCCTCAATGGGTTGCATCTATAGTTAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAACCATAGGAGACGAACTTCTTAATACATTGAAATTGGCTTTACACTGTGTTGATCCTTCACCTTCTGCAAGGCCAGAAGTTAAGCAAGTTTTGCAGCAATTAGAGGAGATTAAGCCAGAATTGGTTGAAGTTGAAGTTGATGATGATGGAGCTAAGGTTCAAACAAATGAATAA 2376 0.3497 MENNTWHNAKDLIFGLNPFQKCRKNQKGSFILLIFLLFVCFSVEPVLGHLWDGVVVTQSDFQSLRAIKNELIDSKGILKSWNDSGLGACSGNWVGIKCLKGEVVAIQLPWKSLGGKISEKIGQLQSLRKLSLHDNSLVGSIPFSLGFLPNLRGVYLFNNKLSGSIPPSIANCPMLQSFDVSHNSLIGKIPSGLANSTRIFRINLSYNSLSGSIPSSFTMSHTLTILSLEFNNLTGPIPSELGKLTRLRILDLSNNAINGSFPLSFSNLSSLVSLNVENNHLENHVPNTFENLHNLSVINLKNNKFDGKIPSTLGNISTISQIDLSQNKFVGEIPDSFTKLANLSSFNVSHNNLSGHVPSLLSKKFNASSFEGNFGLCGFISSKPCPSPSPPPHNPPAQSPEEPPSKKHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSSKAAKAAASARSVEKGGQTGGEAVSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIIVEWPTRMKIAIGITNGLCCLHNQENIIHGNLTSSNILLDEQTTPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEVEVDDDGAKVQTNE 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00327 791 SMART LRR_typ_2 148 172 IPR003591 -
Tsu06g00327 791 SMART LRR_typ_2 268 291 IPR003591 -
Tsu06g00327 791 SMART LRR_typ_2 340 363 IPR003591 -
Tsu06g00327 791 SMART LRR_typ_2 244 267 IPR003591 -
Tsu06g00327 791 SMART LRR_typ_2 124 145 IPR003591 -
Tsu06g00327 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 27 240 - -
Tsu06g00327 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 228 785 - -
Tsu06g00327 791 CDD STKc_IRAK 506 771 - -
Tsu06g00327 791 MobiDBLite consensus disorder prediction 386 401 - -
Tsu06g00327 791 ProSiteProfiles Protein kinase domain profile. 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g00327 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 228 785 - -
Tsu06g00327 791 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Tsu06g00327 791 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Tsu06g00327 791 SUPERFAMILY Protein kinase-like (PK-like) 504 774 IPR011009 -
Tsu06g00327 791 MobiDBLite consensus disorder prediction 451 475 - -
Tsu06g00327 791 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Tsu06g00327 791 Gene3D Transferase(Phosphotransferase) domain 1 578 787 - -
Tsu06g00327 791 Gene3D Phosphorylase Kinase; domain 1 506 577 - -
Tsu06g00327 791 SUPERFAMILY L domain-like 112 364 - -
Tsu06g00327 791 Pfam Protein tyrosine and serine/threonine kinase 504 768 IPR001245 GO:0004672|GO:0006468
Tsu06g00327 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 27 240 - -
Tsu06g00327 791 MobiDBLite consensus disorder prediction 386 409 - -
Tsu06g00327 791 Gene3D Ribonuclease Inhibitor 108 388 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g00327 Tsu-Chr6 2669064 2672520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00327 49 773 Receptor kinase-like Gene Family AT3G51740 63.918 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu06g00327 PK_Tyr_Ser-Thr 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00327 - - aip:107625805 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g00327 06 2669064 2672520 Tsu06g00327 06 2669064 2672520 ECH