Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g00308 ATGGAACCATTTAGCATTGAGATTCCTGCCGGAGAAGATGTTGTATCTACTCTTGTCAACTTGGCTCAATCTTGTCAAGCTGGAATCGTTGTGTCGAGTTGTTCCGGCCTTATATCAGATGTTGTCCTTATTGACCCAGTGTCTCGTGTCCCTACTTCACCCGTCCAAGGAGTGTTCCAAATAACACGTCTCTTTGGAACTTACATCAATGCCAACGATGGTTGTGTTCCTCCTCAGGTCATGGACACTTTTGGCGgaccttcttttttttccattttgttCCATGACAATCATGGAAAAGAATTTGGTGGAATTGTTAAAGAGAAGGTTATGGCTGCTGGTGTTGTTTTGGTCAAAGGCTTTCTTTTTAGAAAACCAAAGTTCCATAGGATGGATGTCATAAATGGAATTGGTGAAGGAAttgaagaggatgatgactccatttatgatgatgatgaagaagaagaagaagaagatgattattgttattataatgataatgatgatatcATCAATGCTTGTCATGTTCTAGTAGCATTGAAAAGTGTTAACTAG 555 0.3333 MEPFSIEIPAGEDVVSTLVNLAQSCQAGIVVSSCSGLISDVVLIDPVSRVPTSPVQGVFQITRLFGTYINANDGCVPPQVMDTFGGPSFFSILFHDNHGKEFGGIVKEKVMAAGVVLVKGFLFRKPKFHRMDVINGIGEGIEEDDDSIYDDDEEEEEEDDYCYYNDNDDIINACHVLVALKSVN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g00308 184 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 150 IPR014476 GO:0003680
Tsu06g00308 184 Gene3D - 4 132 - -
Tsu06g00308 184 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 130 - -
Tsu06g00308 184 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 150 - -
Tsu06g00308 184 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 117 IPR005175 -
Tsu06g00308 184 ProSiteProfiles PPC domain profile profile. 1 127 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g00308 1 157 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 26.415 1.41e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g00308 - K14684 mtr:MTR_1g032910 136.346